Paralichthys olivaceus (Japanese flounder): 109637082
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Entry
109637082 CDS
T06037
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04142
Lysosome
pov04144
Endocytosis
pov05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109637082
04142 Lysosome
109637082
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109637082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109637082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pov04147
]
109637082
Membrane trafficking [BR:
pov04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109637082
Exosome [BR:
pov04147
]
Exosomal proteins
Proteins found in most exosomes
109637082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
LVIVD
Motif
Other DBs
NCBI-GeneID:
109637082
NCBI-ProteinID:
XP_019954771
LinkDB
All DBs
Position
Unknown
AA seq
1703 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTVA
LVTDSAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNTKLSTLFCFAVRSPGGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPYETTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EELFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTLALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPFY
DSAVVGRYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EEDNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLHRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEFDNAVLTMMS
HPTDAWKEGLFKDIIAKVANVELYYKSLSFYLDYKPLLLNDLLTILSPRLDHSRAVTFFS
KLNQLKLVKPYLRSVQSHNNRSVNEALNNLLTEEEDYQGLRASIDAYDDFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
GRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVMVD
KLEETESQRKTEEEVTEPQPIVFGQQLMLTGSAAPVAPQPAYSGYGYPANAAGFPPQAAA
AATAAAAAAAAGYPAQPAYGFNI
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattctgccgatccgcttccaggagcatctgcagttgcagaacctgggcgtg
aacccagccaacattggcttcagctatctgaccatggagtcggacaagttcatctgcatc
cgagagaaggtgggcgagcagaaccaggtggtgatcgtggacatgtccgaccccaccaac
ccaatcaggagaccaatttctgccgacagtgccatcatgaaccccgccagcaaggtcatc
gccctgaaagctgccaagacactgcagatcttcaacatcgagatgaagagtaaggtgaag
gctcacacaatgacggaggaggtcatgttctggaagtggatatcagtaaacactgttgcc
ttggttacggattcagccgtctatcactggagcatggagggggattcccaaccaaccaaa
gtattcgatcggcacgccagtctggcaggatgtcagataatcaactacagaactgacgag
caacagaagtggttactgctgatagggatctctgcacagcaaaaccgtgtagttggagcg
atgcaactgtattctgttgacaggaaagtgtctcagcccatcgaaggccacgctgctgct
ttcggggagttcaaagtggagggaaataccaaactctccacccttttctgttttgctgtg
cgctccccgggtggggggaagttgcatatcattgaagtgggtcaaccagctgcaggaaac
cagccctttgctaagaaggctgtggacgtgttcttccctccagaagctcagacagacttt
cctgtagctatgcagattggcagtaagcatggtgtaatatatttgattactaagtatggt
tacatccacctgtatgacctggagtctggagtgtgtatctacatgaatcgaatcagtgca
gagaccatctttgtcactgctccttatgaaaccacctcaggaataattggagtcaacaag
aagggacaggtcttgtcagtatgcgtcgaagaggaaaacattgtcaactatgccacgaac
gtccttcagaaccctgatcttgccctgaggatggcagtgaggtcaaaccttgctggggct
gaggagctttttgcccggaagttcaacactttgtttgcccagggaagttattcagaggct
gcaaaggttgctgcatcagcaccaaagggaatcttaaggacagcagagaccatccgtaag
tttcagagtgtcccggcgcagccaggtcaggcctctccactgttgcagtactttggtatt
cttctggaccagggccaactgaacaagtttgagtctctggagctgtgcaggcccgtcctg
cagcagggccgcaagcaactgctggagaaatggttgaaggaggacaagctggagtgctca
gaagagctgggagacctggtgaaggcctctgaccccacactcgctctcagtgtttacctc
agagctaacgtccccaacaaggtcatccaatgctttgcagagactggccagttccagaaa
atagtgctgtatgctaaaaaggtgggctacaccccagactgggtgtttttactgagaaat
gtgatgcgtgttaatccagaccagggacttcagtttgcccagatgctggtccaggatgag
gagccgctggccaacatcaaccagattgtagatgttttcatggagggcagcctgatccag
cagtgcacctccttcctattggatgcgttaaagaacaaccgtccagctgaaggacacttg
cagacacgtctgctcgaaatgaacctcatacatgccccccaggtggcagatgcgatcctg
gggaaccagatgttcacacactatgaccgtgcccatgttgctcagttgtgtgagaaggca
ggtctgctgcagagagctcttgaacactacaccgacctgtatgatatcaaacgagctgtg
gtgcacacgcatctgctcaaccctgagtggctggtgaacttctttggctctttgtcagta
gaagactcgttggagtgtttaagggccatgctgtcggctaacatcagacagaacctgcag
ttgtgtgtccaggtagcatctaagtatcacgagcagctgggaactctggcattagtggag
ctctttgaatccttcaagagttatgagggattgttttacttccttgggtcgattgtgaat
ttcagccaggagccagacgtccactttaagtacatccaggctgcctgtaaaacaggtcaa
atcaaagaagtggagagaatatgtagagagagcaactgttatgacccagagagggttaaa
aacttcctcaaggaggccaaactaacagaccagcttccgcttatcattgtgtgtgatcgc
tttgacttcgtccatgatcttgttctttacctctaccgcaacaatctacagaaatacatt
gaaatctatgtacagaaggtgaaccctagtcgtttaccagtggtgataggtgggctgttg
gatgtcgactgtgctgaggatgtcattaagaacctgatcatggtggtcagagggcagttt
tccactgatgaactggtagaggaggtagagaagagaaaccggttaaagcttctgttgccg
tggctggagtcccgtatccatgaaggctgcgaggagccagccactcacaatgccctcgct
aagatctacatcgacagcaacaacacacctgaacgtttcctgaaggagaatccgttctac
gacagcgctgttgtcggtagatactgtgagaagagagacccccacctggcatgtgtggcc
tacgagagaggacagtgtgacctggagctaatcaaagtttgcaatgagaactcattattt
aagagtgaggctcgatatctggtacgacggaaagatcccgagctctgggcgaacgtgttg
gaggaagacaaccccttcagaagacaactcattgatcaggtggtccagacggcgctgtca
gagacgcaggaccctgaggaagtgtccgtcaccgtcaaggctttcatgacggcagacctg
cccaacgagctgattgagctgctggagaagattgtacttgataactctgtcttcagcgag
cacagaaacctccagaacctactgattttgacagccatcaaggccgaccgcactcgagtg
atggagtacatcaacaggctagacaactatgacgctccagacatcgccaatatcgccatc
agcaatgagctctttgaggaagcgtttgccattttcaagaagtttgatgtcaacacctca
gccatacaggtcctgatagagcacatagggaacttggatcgtgcctatgagtttgctgag
cgctgtaacgagcctgcggtgtggagccagttagccagagctcagctgcacagagacctg
gtcaaggaggctattgactcgtatattaaagccgtcgacccgtcagcgtacatggaggtg
gtcaacgcagccagcaagaacaataactgggaagacttggttaaattccttcagatggct
cgaaagaaagcaagagagtcgtacgtggagacggagctgatctttgctttagccaagacg
aaccgtctggcggagcttgaggagtttgtcagtgggcccaacaatgctcacatacagcag
gtgggcgatagatgttatgaggagggtatgtacgaagcagccaagctcttgtacaacaac
gtgtccaactttgctcgacttgcatcgacacttgtccatctcggagaatatcaggcggct
gtggacagcgcaaggaaagccaacagcacacggacatggaaagaggtatgctttgcgtgt
gttgacggcgaggagtttcggctggcacaaatctgcggccttcacatagtgatccacgct
gacgagctggaggatctgatcagctactatcaggaccgtggctacttcgaggagctcatc
gctctgctggaggctgcgctgggactggagcgggctcacatgggcatgttcaccgagctc
gccatcctctactccaagttcaaaccacagaagatgagggagcacctggagctgttctgg
tccagagtcaacatcccaaaggtccttcgtgcagcggagcagtctcacttatgggcggag
ctggtgttcctgtacgataagtacgaggagtttgacaacgctgtcctcacaatgatgtct
catcctacagacgcatggaaagaagggctgttcaaagacatcattgctaaggttgccaat
gtggagttgtactataaatctctgtccttctacctggattacaaacctctattactgaac
gacctactgaccattctgtctccacggttggaccacagccgggcagtcaccttcttcagc
aagctgaaccagctgaagttggtgaagccttacctgagatctgtccagagtcacaacaac
aggtccgtcaacgaagctctcaacaacctgctgacagaggaggaagactaccagggtctg
agagcgtctatcgatgcctacgatgactttgacaccatcggtctggctcagaggttagag
aaacatgaactgattgagtttaggcgtatcgctgcctacctgtacaagggcaacaaccgc
tggagacagagtgtagagctctgcaagaaggacaaactatacaaggatgccatgctgtac
gctgcagagtcaaaggatgctgagctggcagagacgctgcttcagtggttcctggaggag
ggcaggaaggagtgcttcgccgcctgcctctttgcctcctatgacctgcttcaccctgac
gtggtgctggagctcgcctggaggcacaacatcatggacttcgccatgccgtacttcatc
caggtcatgagagagtacctcacaaaggttgatgagtttgcagcgaaggtgatggtggac
aagctggaggagacagaaagccaaaggaaaactgaggaggaggtgacggagcctcagccg
attgtgtttggccagcagctgatgttgactggctctgctgctccagtggcaccccagcca
gcgtactcaggctatggctaccctgccaacgcagcaggcttccctcctcaggccgccgcc
gccgccactgctgctgctgctgccgccgccgccggctatcctgcacagcctgcttatggc
ttcaacatatag
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