KEGG   Paralichthys olivaceus (Japanese flounder): 109637089
Entry
109637089         CDS       T06037                                 
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109637089 (utp15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pov03009]
    109637089 (utp15)
Ribosome biogenesis [BR:pov03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109637089 (utp15)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_IFT122_1st UTP15_C WD40_Prp19 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st PAC11 NBCH_WD40 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_ACSF4 Beta-prop_NOL10_N DSE1_N Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_EIPR1 TRM82_WD Beta-prop_IFT122_2nd Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_WDR41 WD40_like CFAP251_N Beta-prop_NWD2_C KNTC1_N Beta-prop_At4g14310 Beta-prop_HPS5 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 109637089
NCBI-ProteinID: XP_019954786
LinkDB
Position
Unknown
AA seq 525 aa
MASFKPTKIQVYPKLGEKVTQDTLYWKNYKAPVQIKEFGAVTNIDVSPAAPHNFAVTAFT
RIHIYGAFSQEPVKTYTRFKDTAYCGRFRSDGQLLVAGCEDSVVRLFDVNGRVALRMFKG
HTKAVHVTDFTSDRYQILTGSDDYTCRLWDMPNTTELSTYQEHTDYIRCGVTSKLNRDLF
ITGSYDHTLKVFDARMDKSVMTMDHGHPVESLLLYPSEGLLVSAGGRYVKIWDLLKGGQP
LVSLKNHHKTVTCLCLSSNGQRLLSGSLDRHVKVYSTTNYKVVHNFDYAASILSLALAPD
DESIVVGMTNGILSMKHRKNPEESKEISGQQRRRPSYRVFVKGKNYVPKQDDYLVSKPVK
QHLAKYDKQLKKFNVSQALDRALETWIRFRKPEVTVAVIKELDRRGTLKNALAGRDEQGL
SQLLNFLIGNLVDSRFAPVLVTAAEMILDIYQSVIGQSPVVDRQLIRLQDLIEREIDYQQ
ELLEVLGMLDTMFASSLPRKQVPCSAVSRSNGLVQGEARPQLPAT
NT seq 1578 nt   +upstreamnt  +downstreamnt
atggcttcatttaaacctacgaaaatccaagtctatcccaaacttggggagaaagtcaca
caagacacactctactggaaaaactacaaagctccggtccagataaaagaatttggagcg
gtcacaaacatagacgtctcccccgcggctccacataactttgctgtgacagcgttcacg
agaatccatatttacggggcgttctcccaggagcctgtgaagacgtatacacgcttcaaa
gacaccgcttactgtgggaggttcaggtccgacggtcagctactcgtggcgggatgtgag
gactctgtggtccggctgtttgatgtcaatggccgggtggcactcaggatgtttaaaggg
cacacaaaggccgtacatgtaacagacttcacttcagatcgctaccagatcctcactggg
tctgacgactacacctgtcgactttgggacatgccgaacaccacagagctcagcacctac
caagaacacacagattacatccgctgtggagtcaccagcaagctcaacagagatctcttt
attactggatcatatgaccacacactgaaggtatttgatgccagaatggataagagtgtg
atgaccatggaccacggccacccagtggagagtctcctcctctatccctctgagggtctc
ctcgtctctgcaggtgggcgctatgtgaaaatttgggatcttctaaaaggaggtcagcct
ctggtctccctgaagaaccatcacaaaactgtcacctgtttgtgtctcagcagcaatggg
cagagactgctgtcagggtctctggacaggcacgtgaaggtgtacagcacaaccaactat
aaagtggttcacaactttgactatgctgcctccatcctcagtctggctttagctccagat
gatgagtccattgtcgtgggtatgaccaacggtattctgagtatgaaacaccgaaagaat
cctgaagagtcgaaagaaatctctggtcaacagaggcgacggccatcatatcgagttttt
gtgaaggggaagaactatgtccctaaacaggatgattatctcgtcagtaagccagtgaaa
cagcatttggccaaatacgacaagcagctgaagaaatttaatgtatctcaggctttggat
agagccctggagacatggataagattcagaaaaccagaggtcacagtcgctgttataaag
gagctggatcgaagaggaacgttgaagaacgctctggcaggaagggatgaacagggtctc
tctcagttgcttaacttcctcatagggaacttggttgactccagatttgctcctgtgctc
gtgacggcggctgagatgatcttggacatctatcagtcagtaatcggtcagtcgccagtc
gtggaccgacagctgatacgtctgcaggacctgattgagagggagattgattaccagcag
gaactgctggaggtgctgggcatgttggacacaatgttcgcctcttcccttccaaggaag
caagtgccctgctctgctgtcagcaggtctaacggtttggttcagggtgaagcacgacca
cagcttccggccacctga

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