Paralichthys olivaceus (Japanese flounder): 109637387
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Entry
109637387 CDS
T06037
Symbol
ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109637387 (ddx18)
03009 Ribosome biogenesis [BR:
pov03009
]
109637387 (ddx18)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109637387 (ddx18)
Spliceosome [BR:
pov03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109637387 (ddx18)
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
90S particles
Helicases
109637387 (ddx18)
Pre-60S particles
109637387 (ddx18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
109637387
NCBI-ProteinID:
XP_019955254
LinkDB
All DBs
Position
Unknown
AA seq
665 aa
AA seq
DB search
MADLQMKLLRKRIEKRNVKNKERKLLRKQAEDEEAVNPKGLVEECSEEPTTCCEVEDEVP
KKKEKQQNGAPVEDASTERTLSQRKKKKKRKLADTQESPAEKKTKATEEEEEEEVDEAGV
ADDDGEQATDESEVDADEDVEEGDDNNMEEDSEEEDQPELPSGLTGAFEDTSFTSLAELV
SDNTLKAVKDMGFEHMTEIQHKSIRPLLEGRDVLAAAKTGSGKTLAFLIPSIELIYKLKF
MPRNGTGVVILSPTRELAMQTYGVMKELMAHHVHTYGLVMGGSNRSAEAQRLANGVNILV
ATPGRLLDHLQNTPGFMYKNLQCLIIDEADRILEVGFEEELKQIIKLLPKKRQTMLFSAT
QTRKVEDLARISLKKEPLYVGVDDNKDNATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKK
KLMVFFSSCMSVKFHYELLNYIDLPVLAIHGKQKQTKRTTTFFQFCNADSGILLCTDVAA
RGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRFLKQAKV
PLSEFEFSWSKISDIQSQLEKLIEKNYYLHKSAQEAYKSYVRAYDSHSLKQIYSVNTLNL
PMVSISFGFKVPPYVDLNVHSSKGGKFQKRGGGGGFGYQKSKNGQKSRIFKHVNKGKGDK
RQFSR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctgcagatgaagcttctgcggaaaagaattgagaagagaaatgtaaagaac
aaggagcggaaactgctgaggaaacaggcagaagacgaggaggccgtcaatccaaagggg
cttgtagaggaatgttctgaagaaccaacaacctgctgtgaggtcgaggacgaggtgccc
aagaagaaagagaagcagcagaacggtgcaccggtggaagacgcctccacagagagaacc
ctctctcagaggaagaaaaagaagaaacgaaagctcgctgacacacaagaatctccagct
gagaagaagaccaaagcaacagaggaggaggaggaggaagaggtagatgaagcaggagta
gcagatgatgatggagaacaggctactgatgagtcagaggtagatgcagatgaagatgtg
gaagagggtgacgacaataatatggaggaagatagcgaagaggaagaccaaccagaatta
ccatctggtctaacaggagcatttgaggacacatcatttacctctcttgctgagttggtg
agtgacaacaccctgaaagccgtgaaagatatgggctttgaacacatgactgagattcag
cataaaagtattcgtcccctgctggaaggaagggacgtgcttgctgcagcgaagacaggc
agtggtaaaaccttggccttcctcatcccatctatagagctcatctacaaactcaagttc
atgcccaggaatggcacgggtgtagtgatactttcgcccacacgtgagttggcaatgcag
acctatggtgtgatgaaggagttgatggctcatcatgtgcacacctatggactggtcatg
ggaggtagcaaccgctcagctgaggcccaaagacttgccaatggtgtcaacatcctggtt
gccacacctggtcgtctgctggaccacctacagaatacccctgggttcatgtacaagaac
ctacagtgtctgattattgacgaggcagaccgcatccttgaggtgggcttcgaggaggaa
ctgaagcagatcatcaaactgctgccgaagaagagacagaccatgctgttttcagccact
cagacccgtaaggtggaggacttggctcgcatatcgctgaagaaagagcccctctatgtc
ggggtggatgacaacaaagacaacgcgactgttgatggcctcgagcagggctatgtggta
tgcccatcagagaagcgattcctgctcctcttcaccttcctgaagaagaaccgtaagaag
aagctgatggtcttcttctcatcttgtatgtctgtgaaattccactatgagctgctcaac
tacattgacctgcctgtcctggccatccatggcaagcaaaagcagaccaaacgtaccacc
accttcttccagttctgcaatgcagattcaggcatcctgctgtgcacagatgtggcagct
cgaggactggacatccctgaggtggactggatcgtccagtatgaccctccagatgatccc
aaggagtacatccacagggtcggcagaacagcccgaggcctcaacggaagagggcacgct
ctcctcattctccgaccagaggagcttggcttcctacgctttctcaaacaggctaaggtc
ccactgagcgagtttgaattttcctggagtaaaatctctgatatccagtctcagctggag
aaactgattgagaagaactactacctccacaagtcagcgcaagaagcctacaagtcgtat
gtgagggcttacgactcccactcgctcaaacagatctacagcgtcaacactctcaacctg
ccgatggtgtcaatctcatttggcttcaaagttcccccatatgttgacctgaacgtccac
agcagtaaaggtggaaagtttcagaagcgaggcggcggaggcgggtttggataccagaag
tccaagaatgggcaaaaatctagaatcttcaagcacgtcaacaaaggaaaaggcgacaag
aggcagttctcccgctga
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