Paralichthys olivaceus (Japanese flounder): 109637394
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Entry
109637394 CDS
T06037
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109637394 (pms1)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109637394 (pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109637394
NCBI-ProteinID:
XP_019955274
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MHQLPRDTVRLLSSSQVITSVLSVLKELLENSLDAGSSSIDVKLENYGLDRIEVRDNGHG
IKAADTPVMAVRHYTSKICSHDDLERLETYGFRGEALGSICAVAEVAVTTKTVEDDISIQ
YMLNLTGEIVSQKPSHLGQGTTVSVLKLFKNLPVRRQYYSSSKKCKEELKKVQDLLMAYA
IIKPDLRITLVHNKVVVWQKTKVADHRSALLATLGPSAVANLLPCHYHQEQPEISLEGFF
PKPGADFSSTSSSSPDKTFLFVNNRPVHHKDVLKLLRQHYAAQYPGDPAQNRYPTLLLKM
TVSPSSVDVNLTPDKTQVLLLNKEAVLTAIEAMLVSLYGYQPGCEPSAEKQLGHEMSPLP
LSPSQTDASRLVTGQSKEMDVSVTNHNGDDITLSTAKGTGASLQPQTSNSSSSSSVAEDW
IVPQISARRESNVSLYDDEMAQSCIQTTETGSANESLERLEDNMVTEKNKHQISAEDWSR
GTALTDPLTREPLQPVKIHQPPKHNHSDSDELKSQSSSNKKMFSSIIEKRDALTAYDLIS
NRAIRAPLSSATSLEKEVRAEVLSEEPTAGLQDINVTAQERWKNLREDDHKKSEEKAKQH
HDQRTKLAPAEGPRDPSVSTPKSHVRGQKRKAPLSNQQLLDELFSAQPQKKMKNSAPKPS
QPLPCSVAALRLQLQRLSSQCSAAPRGLRLVNRLASQSAWVILCGQRLMLLNPFRVEEAL
LFKRLLENNILPAESLQNPIQLTDGNLGGAEYTDALCNMEKQSPELDGRTLFSDPRLVAN
GFKIKLTPGLTSTDRHLEVTAMADCVPFLGVEDLREILTAVLHRKAGTVQECRPLKVTNY
LQGEAVRLARQVTTNLSREDVEEILVRMEQQLGENSRSCIHGRPFLQHLLDVPVTEQEAE
ALLRPLEL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcaccagttgccacgagatactgtgcggctgctgtcgagctcccaggtcatcacttca
gtgttgagcgttttgaaagaactgttggaaaattccctggatgccggatcttcaagcatt
gacgttaaactggagaattatggtttggaccggatagaagtacgtgacaatggccatgga
atcaaagctgcagatactcctgtgatggctgtgagacattatacctcaaagatctgtagc
catgacgacctggagcgtctggaaacgtacggcttcaggggagaagcactgggttccatt
tgtgcagtggcagaggtagctgtcaccacgaagacggtggaggatgacatcagcatccaa
tacatgcttaacctcacaggggagattgtctctcagaagccgtctcacttgggtcaaggt
acaacagtgagtgtgctgaagcttttcaagaatcttccagtcaggaggcagtactattct
tcgagcaagaagtgcaaagaggagctgaagaaagtacaagacctgctgatggcatatgct
ataatcaaacctgacctgaggatcacgcttgttcacaataaggtggtggtttggcagaag
accaaggtggccgatcacagaagtgccctccttgctacgctggggcccagcgctgttgcc
aacctgctcccatgccactatcaccaagagcaaccagagatctctttagagggttttttc
ccaaagcctggagcagatttttcctctacaagctcatctagcccagacaaaacgtttcta
tttgtcaacaacagacctgtccatcataaggatgtattgaagttgttgcgccaacactac
gcggctcagtatccaggggatccagcccaaaatcgatatcccacccttttgcttaaaatg
accgtttcaccctcttcggttgatgtcaacctgacaccggacaagacccaggttctactt
ctaaacaaggaggctgtgctgactgctatagaggcaatgctggtttctctctatggctat
cagcctggttgtgagccctcagctgagaaacagctcggccatgagatgtctcctctgcca
ttgagtccttcgcagactgatgcttcacgacttgtcactgggcaaagtaaagaaatggat
gtcagtgtcaccaaccacaatggcgatgacatcactttgtctacggctaagggcacgggt
gcgtcactgcagccccagacctcgaacagcagttcttcatcttcggtagcagaggactgg
attgtcccccagatctcagccaggcgtgagtctaacgtttctctttatgatgatgaaatg
gctcagagctgcattcagacaacagaaacaggttcagcaaacgaatccttggaaagactt
gaggacaatatggtgacagaaaaaaacaaacaccagatatcagctgaggactggagccgc
gggacggctctgactgaccccttaacacgagaacccctgcagcccgttaaaatccatcag
cccccgaagcacaatcattctgactcagatgagttaaagagtcaaagcagctcaaacaaa
aagatgttcagtagcataatagagaagcgggatgcactgacagcctacgacctgatcagc
aaccgtgccatcagggctccgctgtcttctgccacctcactggagaaggaagtcagagct
gaggtgctgagcgaggaacccacagctggcctgcaggatatcaatgtcactgctcaagag
aggtggaaaaatctgagggaggacgaccataagaagtctgaggagaaggcaaagcaacac
catgaccaaaggaccaaattggcccctgctgagggccccagagatccgagtgtgagcacc
ccaaagagccacgtgcgcggccagaaacgcaaggccccgctgtccaatcagcagctgctg
gacgagctcttctctgcacagccccaaaagaagatgaagaactctgcacctaagccctca
cagcccctcccctgcagcgtggctgcccttcggctgcagcttcagcgcctctcatcccag
tgcagcgcagcaccgcggggcctccgtcttgtaaaccgactggcctctcagagcgcctgg
gtcattttatgtggtcagaggctcatgttgttaaacccatttcgagtggaggaagccttg
ctgtttaagagacttctagagaataatatacttccagctgagagtctgcagaaccctata
cagttaacagatggaaatttagggggagctgaatatacagatgctttgtgcaacatggag
aaacaaagccctgagctggacggacgcaccctcttctctgatcccaggcttgtagctaat
gggtttaaaatcaaactcaccccaggcctcacatcaactgatagacatctggaagtgaca
gcaatggcagactgtgtgcctttcctcggtgtggaggacctcagggagatcctgactgca
gttcttcacaggaaggccgggaccgtgcaggagtgccggccacttaaagtaacaaactac
cttcaaggagaagcagtacgacttgcccgtcaggtgactacaaatttatcgagggaagat
gtggaggaaatccttgtgcggatggaacagcagcttggtgagaacagtaggtcctgcatc
catggtcggccatttctccaacacctcttagatgtccctgtcacagaacaggaggctgag
gctctgctgaggcctttagagctgtag
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