Paralichthys olivaceus (Japanese flounder): 109637508
Help
Entry
109637508 CDS
T06037
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109637508 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109637508 (apex1)
Enzymes [BR:
pov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
109637508 (apex1)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
109637508 (apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
109637508
NCBI-ProteinID:
XP_019955468
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MHSHPIADRVAFPACVLLCVRVVRLRGVFATRGSSSMKRGKKAEEAAAVEGEADTSPATA
KKTKKAKEPEAPILYDDPPDKMTSKDGRDANMKITSWNVDGLRAWVKKKGLDWVREEAPD
VLCLQETKCAEKDLPADITSMPEYPHKYWAASDEKGGYSGVGMLCKTEPLKVTYGIGKEE
HDKEGRVITAEFPNFYLVTAYVPNSGRGLVRLDYRKTWDVDFQSYLSELDIQKPLVLCGD
LNVAHQEIDLKNPKGNKKNAGFTPEEREGFSQLLEAGFTDSFRELYPEQTNAYTFWTYMM
NSRSKNVGWRLDYFLLSSSLLPSLCDSKIRNQAMGSDHCPITLHIAM
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcacagccacccgatcgcagacagagtcgcgtttccggcgtgtgtgctgttgtgtgtg
cgtgtcgtgcgtctgcgaggtgtgtttgccaccagagggagttcaagtatgaaaagaggc
aagaaggcagaggaggcggctgcagtagaaggggaggccgacaccagccctgccactgca
aagaaaacaaagaaggctaaggagccagaggcaccgatactgtacgatgaccctcccgac
aaaatgaccagcaaagatggacgagacgccaacatgaagatcacctcctggaatgtggac
ggactgagggcctgggtgaaaaaaaagggcctggattgggtgcgtgaggaggctccagat
gttttgtgcctgcaggagaccaagtgtgcggagaaagacctcccggccgacatcacctcg
atgcccgagtacccacacaagtactgggccgcctccgatgaaaaggggggttacagcggt
gtgggcatgctctgcaagaccgaacccctcaaagtgacctatgggatcggcaaagaggag
catgacaaggagggccgcgtcatcactgcagagttccccaacttctacctggtgaccgcc
tatgtgccaaactccggcagaggccttgtgcgcctcgactatcgcaaaacctgggacgtg
gacttccagtcgtacctgagcgagctcgacatacaaaagcccctggtgctgtgcggcgac
ctcaacgtcgcacaccaggagatcgacctgaagaaccccaagggcaacaagaaaaacgca
ggcttcacccccgaagagcgcgagggcttcagccagctgctggaggccgggttcaccgac
agcttccgcgagctctaccctgagcagaccaacgcctacaccttctggacctacatgatg
aactcccgctcaaagaacgtgggctggaggctcgattactttctgttgtcgtcgtccctg
ctgccgagcctgtgcgacagcaagatccgcaaccaggcgatgggaagcgaccactgcccc
atcactctgcacatcgctatgtag
DBGET
integrated database retrieval system
