Paralichthys olivaceus (Japanese flounder): 109637624
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Entry
109637624 CDS
T06037
Symbol
sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109637624 (sh3tc1)
Membrane trafficking [BR:
pov04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
109637624 (sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
SH3_1
ARM_TT21_4th
SH3_9
TPR_8
Med25_VWA
TPR_7
Motif
Other DBs
NCBI-GeneID:
109637624
NCBI-ProteinID:
XP_019955646
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MSKSIRHRGFDAASLKGTLSTREENIPTALPVKLDVVRGPERLPANEELKERLQGKLRIL
QVDSTEVNTLFMELSAHVISINSKENVILVRFQTFEEIWKFTTYYTTGFLGQCMETLLLD
EEFWLSSLEEDVAIAVSIQEETLQLIYKGILMQDGSLFAICCADQIFDSSTSGRDLYLEQ
GDIAHFEPPFLESGWTVLCLSDGARGTAPTPNLEPVIPFHQWFLKSCAESILVGDGKPAC
DFPLQFARGTCLATVEYHAEGPDELSMAPGDHIIIVGLLVSCFDWFTGRKEATGEVGLVK
TSLVKPFTGIHDSANVVLEEEEMMFYSLQEAKVIEEAIALLKKKSQNDTGHNYKLALLFP
STFAVNSSCQVDTETDLKRNMQRILDQGKDSSDFIVTMDRTLEDSIVPTQAKDPSPPCFT
VYPTVEGNTENFIPLFSFLEGQDCKVEFGALYGLSSELLASTAFSGHSDEEELISFLGVA
REAARKKRLFWSQTRLCFLLGKLCAGRSKFSQARVYFEEALSVPQEGFRDLKLLGSIYSN
LATIYNLQKNTESFFSVMERLAALQLGIPGCLDSLEDNSVLKYILKKAVLSHNKMAEAWA
CYLLAKYHWTEKAGRAEVVPFLERLLVLSTEAQRPWTFSVSNGYLTLARLYSELCLLHLS
VSSARRASLQPSAKLSDCLNSMVLVLDNLNKMYGITEQEASILPEVAPFLHKALSLIKTQ
GGGRNQYHVLSHQLTISLCQLFYKHKMVECAIHQMCILINNTPPLQNLPISVSERNGALI
WLAWLHIDNSQPNFALDILDSILSSIPEHCTTPQEGVVQNMRGVALRCMGDLQRAAESYQ
AAADICQEYEDLSNWAVTQANLGLLCLKAGAKRLAQRYLIEAVQLFSGLDTEGHETNFIT
VLLELGHLYLKQQQIQYGKGCFEWALLLAIQANLLDCQLTATRQLCHLYGCESPDQAQFI
IYSEHQVQLLRHTGDRQQEGDALEAISQLYLTLGTERAYQSALDYTKSSLGIFIDLGCRE
KEANGWLEAGKIYHLLGQTELVDLYVQVAQDVGLRTGDTTFILQLLEAAGDIFFNSCHSR
NKAITFYRDHALPIAVKSSSVRARLRLCNKLTEVMLTLKLYGEAVEFAQTALDISITLGE
RLNERVAYHRLASLYHCLEQYELAEHYYLKTLTHCPTPLQFDEETLYYVRVYQTLGDIMF
YDLKDPFDAAGYYHLALAAAMDLGDKRAQLKLCTQLATIYHNFLTDRELSLFFYQRARGF
AAELNVRRIDISPDKHFNSISQYKTT
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcaatccgacacagaggatttgatgctgcaagcctgaagggaactctatca
acacgtgaggaaaacatcccaactgctctgcctgtgaagctcgatgtggtcaggggtcca
gagcgtcttcctgcaaatgaagagttaaaagaaaggttgcaagggaaactgcgcattctg
caggttgacagcaccgaggtcaacactctattcatggagttgtctgctcatgtcatctcc
atcaatagcaaagaaaatgttatattggtaagattccaaacatttgaagagatctggaag
ttcaccacatattatacaacaggtttccttggtcagtgtatggagaccttgttgttagat
gaggagttctggctcagttctttggaggaggacgttgctattgcggtttccattcaggag
gaaacacttcaactaatctacaaaggcatcctcatgcaagatggttcgttgttcgctatt
tgttgtgccgaccaaatatttgatagctcgacatctggaagagacctgtacctggagcag
ggagacatagctcactttgagcctcccttcttggagtcaggttggactgttctctgccta
tctgatggagcccggggcactgcacccacacccaatctggagccagttattccttttcat
caatggtttcttaaatcctgtgctgagagcattttagttggagatgggaaacctgcctgt
gacttccctctgcagtttgccagaggaacctgtctggccacagtggagtatcatgctgaa
ggcccagatgagctgagcatggcaccaggtgatcacatcatcattgtgggactcctggtg
tcttgttttgactggttcacaggaaggaaggaggcgacgggagaagtgggtctggtcaag
acaagcctagtgaaaccattcactggcattcatgactcagcaaatgtagttttggaggaa
gaggaaatgatgttctacagtctgcaagaggccaaagtaatagaggaagcaattgcttta
ttgaagaagaaatctcaaaatgacaccggtcataactataaattggcattgctttttcct
tcaacctttgcagtcaactcttcatgtcaagttgatactgagactgacctgaagagaaat
atgcagaggattctggatcaaggaaaagactcatcagatttcattgtgaccatggacagg
actttagaggattcaatcgtgcctacacaggcaaaagacccaagcccaccctgtttcact
gtttacccaactgtggagggaaacactgagaacttcatcccgctcttctcttttttggag
ggacaagattgcaaagtagagtttggtgccctgtatggactgagttcagaactcctcgct
tccactgccttctccggtcactctgacgaggaagagctgatttcctttctgggtgttgcc
agggaagcagccaggaaaaagcgactcttttggtcacagactcgtttgtgcttcctgtta
ggtaagctctgtgctgggaggtcaaagttcagccaggcgcgggtttactttgaggaggcc
ctcagtgtgccacaagaaggcttcagggaccttaaactgttggggagcatctactctaac
ctggctaccatatataatttgcagaaaaatactgaaagtttcttttctgtgatggagcga
cttgctgccttgcaattaggaatccctggctgcctggacagcttagaggacaactctgtt
cttaaatacatcctcaagaaagctgttctctctcacaacaaaatggcggaggcctgggct
tgttatcttttggcaaagtaccactggactgagaaagctggaagggctgaagttgttcca
tttcttgagagacttcttgttctctctactgaagctcaaagaccatggacattttcagtc
agtaatggatacttgaccttggcaaggctgtacagtgaactctgccttctccacctcagt
gtcagttcagccaggagagcttctcttcagccatctgccaaattgagtgactgtcttaac
agcatggtcctggtcctggataatctcaacaaaatgtatgggatcacagaacaggaagcc
tccatcctacctgaagtggctccatttttacacaaagccctctctctaatcaaaacccaa
ggtggaggaaggaaccaataccacgttttgagccatcaacttactatttctctttgccaa
cttttttacaagcacaaaatggttgaatgcgcaatccaccaaatgtgcattcttataaac
aacactccacctttacaaaatcttcccatctctgtgtcagagagaaacggtgcccttatc
tggctggcatggcttcacattgacaacagccagcccaattttgcattggatatactagac
tccatcctgtcttccataccagaacactgcacaactcctcaggaaggtgtagtccaaaac
atgcgtggtgtggcacttcgatgtatgggagacctccagagggcagcagagagctaccag
gctgcagctgacatctgccaagagtatgaggacctttcaaactgggctgtaactcaggca
aaccttgggctgttgtgtctgaaggctggagctaaaagacttgcacagaggtacttgatt
gaggctgtgcagctcttctcggggctggatacagaaggtcatgaaacaaacttcatcaca
gtcctgcttgagctggggcatctctatttgaagcagcagcagatacagtatgggaaagga
tgctttgagtgggctctgttgttggcaatccaagctaacctgttagattgtcagctcact
gcaactagacaactgtgtcatctttatgggtgtgagagtccagaccaggcacagtttatc
atctacagtgagcaccaggtccagctgctgagacacacaggagacagacaacaggaggga
gatgcactagaggccatcagccagctctacctcactctgggcacagaaagggcgtaccag
tcagctcttgactataccaagagcagtctgggtattttcatcgacctgggttgcagggag
aaagaggcaaatggctggttggaggctgggaagatataccacttgctgggccagactgaa
ctggtggacctttatgttcaggtagctcaggatgtcggcctgagaacaggagacaccact
ttcatcctccagcttctggaagctgcaggagacattttcttcaacagctgccacagcagg
aataaggctatcaccttctacagggaccatgctctgcccatcgcggtgaagagcagcagt
gttcgtgccaggctgagattgtgtaataaactgactgaagtgatgctcactctaaagctg
tatggggaagctgttgaatttgctcagactgcactggacatcagtatcactctgggtgag
cgtctgaatgagcgagtggcctaccaccgcctggcctctctctaccactgcctggagcag
tatgaactagctgaacactattacctgaagactctgacccattgtccaacacctttgcag
tttgatgaggaaacactgtactatgtcagggtctaccagacactaggggacatcatgttc
tatgacctgaaggacccatttgatgctgcaggctactaccacttggctctggctgcagcc
atggaccttggcgacaagcgggctcagctgaagctttgcacacagctcgccaccatctac
cacaatttcctcacagaccgggagctgtctctcttcttttaccagagggcaagaggattt
gctgcagagctgaatgtgagaaggattgacatttcaccagataagcattttaacagtatc
tcacagtacaagaccacatga
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integrated database retrieval system
