Paralichthys olivaceus (Japanese flounder): 109637824
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Entry
109637824 CDS
T06037
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109637824 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109637824 (dhx15)
03009 Ribosome biogenesis [BR:
pov03009
]
109637824 (dhx15)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109637824 (dhx15)
Spliceosome [BR:
pov03041
]
Complex A
U2 snRNP components
U2 related factors
109637824 (dhx15)
Complex B
109637824 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109637824 (dhx15)
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
90S particles
Helicases
109637824 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_25
SRP54
Flavi_DEAD
nSTAND3
AAA_29
AAA_7
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
109637824
NCBI-ProteinID:
XP_019955985
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSTSKKRSEGRDRDRDRDREDRSRDRDRDRDRDRDRDRDRDPKPASAP
TNIPAAVPGILPLKQMLVQQQINPFTNLPHTPRYYEILKKRLQLPVWEYKESFSDIITRH
QSFVLVGETGSGKTTQIPQWCVDMVRGLPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRPDLKVIVMSATLDAGKFQVYFDNCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEDEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYEMSNFPQCEAKRQLERIVAKLESKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagacaccggctggatttgggtgatgactactcgaccagtaagaagaggtct
gaggggagagatcgggaccgagacagagaccgggaggaccgctccagggacagggacaga
gatagggatcgggaccgggacagagaccgggacagagacccgaaacccgctagtgcgcca
actaacatcccggcagctgtgccaggcatactaccgcttaagcagatgttggtgcagcag
cagatcaatccgttcaccaacctgccgcacacaccacgttactatgagatcctgaagaag
aggttgcagcttccagtgtgggagtacaaggaaagcttcagcgatatcatcacacgccat
cagagctttgtccttgttggagagactggctctgggaagacgacacagatcccacaatgg
tgcgtggacatggtgagaggcttgcctggtccgaagcgagcggtggcctgtactcagccc
agaagagtggctgccatgagtgtggctcagagggtggcagatgaaatggacgtcatgctc
ggacaggaagtcggttactctattcgatttgaggactgtagctctgcaaagaccatacta
aagtacatgacagacggtatgttgctaagagaggctatgaatgacccgctgctggagcgt
tacggtgtgatcattctggatgaagcccacgagcgaactctggccacagacatcctgatg
ggagtactcaaggaggtggtgcgtcaaagaccagacctaaaggtgatcgtcatgagtgcc
actctcgatgctgggaagttccaagtttactttgacaactgccccctgctgacgattcct
ggccgtacacaccccgtggagatcttctacaccccggagcctgagcgggattacctcgag
gcagcgatccgcactgtcatccagattcatatgtgcgaggaagatgaaggtgactgcctg
ctcttcctcactggtcaagaggaaattgacgaggcctgcaaacgaatcaagcgtgaggtt
gatgaccttggccctgaagttggggacatcaaaatcattccactgtattcaacgctgcct
ccacagcagcagcaaaggatctttgagcctcctcctccacggaagcccaatggcgcaata
ggaagaaaggtcgtggtgtcaacaaacattgcggaaacttctctaacaattgatggcgtg
gtgttcgtcattgatcctggattcgccaaacagaaggtgtacaatcctcgtatcagagtg
gagtctttgctcgtcacagccatcagtaaagcttctgcccagcagagggcgggacgagcc
ggcagaacacgtccaggaaaatgtttccgtctctacacagagaaggcctacaaaacagag
atgcaggacaacacgtaccctgagattcttcgatccaacttgggctctgttgtgttgcag
ctgaaaaagcttggcattgatgacctggtgcactttgacttcatggatccaccagctcct
gaaaccctgatgagagccctggaactgctgaattacctcgcagctctcaacgatgacggt
gacctgacggaactgggatccatgatggccgagtttcccctggatccccagctggctaag
atggtcattgccagctgcgagtttaactgctctaatgagatcctttccattactgccatg
ctgtcagtcccacagtgttttgtccgccccacggaggctaagaaggcagctgacgagtcc
aagatgaggtttgctcacatcgacggagaccacttgacgctgctcaacgtttatcacgcc
ttcaaacaaaaccatgagtcgaaccagtggtgttatgacaacttcgtcaactaccgttca
ctgatgtctgctgacaacgtgcggcagcagctgtccaggatcatggaccgcttcaacctt
ccccgtcggagcacagagttcaccagcagagattattacatcaacattcgccgggcgctc
tgcaccggcttcttcatgcaggtggctcatttggagcgcacaggtcattacctcacagtg
aaagacaaccaagtcgtccaactgcacccatctacagtcctggaccacaagcctgagtgg
gtgctctataacgaatttgtcctcaccaccaagaactacatccgcacttgcacagacatc
aagccagaatggctggtgaagattgccccgcagtactatgaaatgagtaacttcccacaa
tgtgaagctaaacgacagctggagcgaatcgttgccaaactagagagtaaagagtactcc
cagtactga
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integrated database retrieval system
