Paralichthys olivaceus (Japanese flounder): 109637866
Help
Entry
109637866 CDS
T06037
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109637866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109637866
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109637866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
109637866
NCBI-ProteinID:
XP_019956058
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MSAEEADKTATTDASAGDEEEEWLYGDESESKDEDEEAKLNAAVSAPADASTEDAAAHAT
GNGVASEGTGEAAAEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTPYGAPPVNLNIKTTG
SRPYGQVTTKMKGVDLDGPGNINGVAVVEADMESFEEKPWRKPGADLSDYFNYGFNEDTW
KAYCEKQKRLRMGLEVSTISSGTSKITVQQGRTGNDKDISSLPVHTSKPDFTSPISLYKS
AISQVTRISPPQWTGPPVQDMSYYTKSGIIDVIGGQTATISRVEGRRRHNLEGNNITVIS
EHSTPDAEPTPAKIPTFFPPGPLPPNIPPPPFLPPPPNVSTAPPLIPPPRLPITVPPPGF
PPPPSGPPPAIIPTMDSGHPGGYDGRPVPPYPFPQGAYPPPMAGGVPPPWPPMMDNSKPW
DYYPRRDDKREKDRERPRERTHEREREREHSPSAMSYTSDDERYRYREYQERGYGERHRD
RTSREKEERHRERRHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEA
SEEISADQENQEAME
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaggcggacaaaacagccaccactgatgccagcgctggagacgaggag
gaggaatggctgtatggagatgagtctgagagcaaagacgaggatgaagaagccaaactg
aacgcagcagtcagtgcacccgctgatgcttccacagaggatgccgctgcacacgctaca
ggaaatggagtggcctccgagggcacaggtgaagcagcagctgaagacgtggacagtgat
agtgacagcgatgatgacgacgatgatgtccgagtcaccattggagacattaaaactgga
gcaccacaatacacaccttatggagctcctcctgtaaatctcaacataaagacaacaggc
tcccgaccttacggacaagtgactacaaagatgaaaggagtggatcttgatggtccagga
aacattaatggggttgcagtggtggaggcagacatggagtcatttgaagagaaaccgtgg
aggaagccaggagcggatctgtccgactactttaactatggcttcaatgaagacacatgg
aaggcgtactgtgaaaaacagaagaggctgcgtatgggtctggaggtctccacaatcagt
tcagggacgagcaagatcactgttcagcaaggcaggacaggcaacgacaaagacatatcc
agtttgcctgttcatacctcaaagccagacttcacgtctcccatcagcctgtacaagtct
gccatcagtcaggtcaccaggatctctccccctcagtggactggcccgcctgttcaggac
atgtcctattatacgaagagcggtatcatagatgtgattggtggacaaacagccaccatc
agcagggttgaaggtcgacgcagacacaacctggagggcaacaatatcactgtgatctct
gaacactccacgccagatgctgagcccactccagctaagattcccaccttctttcctcct
ggacctcttcctccgaacatacccccacctccatttctccctccgccaccaaatgtcagc
actgcacccccactcatccccccacccaggttgcccattactgtccctccccctggtttt
cctcctccacctagtgggcccccacctgcaatcatccccactatggacagtggccaccct
ggaggttatgatggacgccctgttcctccgtatccgttccctcaaggtgcttaccctcca
cccatggctggaggtgtgcctcctccatggcccccaatgatggacaactcgaaaccctgg
gattattatccccgccgagacgacaagagagagaaggacagggagaggcccagggagagg
acgcatgagcgggagagagaaagggagcacagtccttcagctatgagctacactagcgac
gatgagcgttatcgttaccgtgaataccaggagcgtggttacggagagcgccatcgtgac
cggacgagtcgagagaaagaggaaagacacagagagaggcggcaccgagaaaaagaggag
ggacgccacaagtcctctcgcagcagcagcagcaggaggaggcacgacagcgaggagggc
gacagccaccggaggcacaaacacaagaagagcaagagaagcaaggagggcaaagaggcc
agcgaggaaatcagtgcagaccaagaaaaccaggaggccatggagtag
DBGET
integrated database retrieval system
