Paralichthys olivaceus (Japanese flounder): 109637954
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Entry
109637954 CDS
T06037
Symbol
usp9x
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pov01002
]
109637954 (usp9x)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109637954 (usp9x)
Enzymes [BR:
pov01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109637954 (usp9x)
Peptidases and inhibitors [BR:
pov01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109637954 (usp9x)
Ubiquitin system [BR:
pov04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109637954 (usp9x)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
109637954
NCBI-ProteinID:
XP_019956194
LinkDB
All DBs
Position
Unknown
AA seq
2622 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQEDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAA
NPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLKMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPAADMETRRGAYLNALKIAKLLLTSVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSG
EFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQE
NESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YISELTVSSTKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQEHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGPSTQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDTNLTA
PVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQVA
YSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDASPPEDT
SLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPATAPTPGPTPTPTQNQTPPTP
GTGPGPSPGPGPRAQENWESTEEVTPAPAPASTAPAPAPPKE
NT seq
7869 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccacgcgtggctctccggtggggggcaacgacagtcagggccagggccag
gcacctgacgctcaaagccaacccccactgccacagaaccagacatcatctcctaactca
tctaatgagaactctccagtgagcccaccagatgagcagggtcaggaggatgggccccct
cagctggaagaggaggagcctgctttccctcacactgacctagcaaagctggatgacatg
atcaacaggcctcgttgggttgttccagttttgccaaaaggagagttagaggtccttttg
gaagctgctatagacctgagtaaaaaaggactggatgtaaagtgtgaggcatgtcagagg
tttttccgagatggtttgaccatctctttcacaaagatcctgacagacgaggcagtcagc
ggctggaaatttgagattcataggtgtattataaataacacacaccgattggtggagttg
tgtgtggccaagctctctcaggactggtttcctctactggagcttctggccatggccgcc
aaccctcactgcaagttccacatctataatggcacacggccctctgagaccgtccctgct
ggagcacagctggctgacgatgagctctttgcccgaccaccagacccacgatctcccaag
ggctggttggtggacttaataaacaaatttggcacgttaaacgggtttcaaatgttgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttccttacattgcacacggtaaagaagtacttccttccagtc
atcgagatggttcctcagtttctagagaatctcacagatgaggagctgaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggct
tcacgcgtaccagggcaagaggagaccgtgaagaatttagagatttttaggttaaaaatg
attcttaggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaatgaagtt
aacaaggtgatctccagtgtgtcctactacactcatcggcataaccctgaggaggaggaa
tggctgactgcagagcgcatggcggagtggatccagcagaaccacatcctgtccattgtg
ctcagggacagtttgcaccagccgcagtatgtcgagaaactggagaagatccttcgcttc
gttatcaaagagaaagcccttacaatgcaggatctggataatatctgggctgcacaggct
ggtaagcatgaggctattgtgaagaatgtccatgacctcctggccaagctggcttgggac
ttctcacctgagcaactcgatcacctctttgactgtttcaaggcaagctggaccaatgcc
agcaagaagcagcgtgaaaagctgctggaacttatccggcgcttggctgaggatgataag
gatggtgtgatggcccacaaggtcctcaacctgctgtggaacctggcacacagcgatgat
gtgcctgtagacatcatggaccaggctcttagtgctcacatcaagatattggattacagt
tgctcacaggacagagacacgcagaaaatccaatggatagatcgcttcatagaggaacta
cggaccaacgataaatgggtgatccctgccctaaagcaaatcagagaaatctgtagcctc
tttggtgaagctcctcaaaaccttagaaagaaaatgccaattaacatacaaacgaactta
gtgggtcaaacccagagaagtcctcatgtgttctaccgacatgacctgatcaaccagctg
cagcacaaccacgctctggtgaccttggtggctgagaatctctcagcctacatggagacc
atgaggcagttctccaaagaagagcaagctgagtttgacccccagactgtcaggccagga
agccgctacagccatgtccaggaagtacaggagcggctcaacttcctgaggttcttgcta
aaggatggccagttgtggctctgtgcccctcaggccaagcagatctggaagtgtttggct
gagaatgcagtgtttctttgtgaccgtgaggcctgcttcaaatggtactccaagctgatg
ggtgatgagccagacctggacccggacatcaataaggacttctttgagaacaacgtcctg
cagttggacccgtctctgctgacggagaatggcatgaagtgctttgagaggttcttcaag
gccgtcaactgcagggagggcaagctggttgcaaagcgcagggcctacatgatggatgac
ctggaactaataggcttggactacctctggagggtggtgattcaaggtagtgatgacatt
gctagccgagcaatagacctgctgaaagagatttataccaacctcggaccaaaactacaa
gttaatcaggttgaaattcatgaggatttcatccagtcatgttttgaccgtctgaaggca
tcctacgacaccctgtgtgtgttggacggagacaaagacagcatcaattgcgcccgtcag
gaagccatccgcatggtgcgagttcttactgtgctcaaagagtacatcaatgagtgcgac
agtgactaccacgaggagaggactatactgcccatgtccagagctttccgtgggaagcat
atcacgttgatcgtgcgtttcccaaaccaggggcgtcaggtagatgacctggatatctgg
tcacacaccaatgacacaatcggctcagttcgacgtggcatcctgacccggatcaaagca
aacgctgcacataccaagatagaactctttattggtggcgaggtggtcgatccggctgat
gacaggaagttaattggacagctcaatttgaaggacaaaacgttgatcacagccaagctg
acccaggtgagtgccaacatgccttcaagcccagacagctcctctgactcatccaccggc
tctcctggtaaccacggcaaccactacagcgatgggcccaaccctgaggtggagagctgt
cttcctggtgtgataatgtcgctgcatctccgctacatctccttcctgtggcaggtggct
gacctgggctgcaacctcaaaatgcctctgcttagagatggcgctcgagttctcatgaaa
ctcatgccgccagataacacaacagtggagaatctgagagctgtgtgtctggaccacgcc
aaacttggtgagaacagcctcagtccctcactggattcccgcttcttcggcccctccccc
tcacaagtgctctacctcattgaggttgtgtatgctttgctgatgccagccagtgccact
ctcggcgaggatgccagtgacttccagtacaacttcctgaagagtggcgggctacccctg
gtgttgagcatgctcaccaggaacaactttctcccagcggcagatatggagacgaggcgt
ggggcgtacctcaacgcgctaaagattgccaagctcctcctgacctctgtgggctttggt
catgtgaaggctgtggcagaggcctgccagcccaatgctgagggaaatattcctgtctct
ccgataaaccaggccactcatgatcaggctctggtcctccagagtgccctgcaaaacatc
cccaaccctgcctcagaatgcatgctgcgcaatgtagccatccgcctggcccagcagatt
tctgatgagaattttttccaggcatcaaagtacatcccagacatttgtgtgatccgagcg
gtacagaaaattgtgtgggcatcaggctgtggtacggtgcagctcgtcttcagctccaat
gaagagatcagcaaaatatacgagaagacaaatgcagctaaggagccagatggggaagat
gagcaggtttgctgcgaggccctggaagtgatgacactgtgttttgccctcatgcccacg
gctctggacaccctcagtaaggagaaggcttggcagaccttcatcatagacctgctgctg
cactgccacagcaaatctgttcgtcagatggctcaggagcagtttttcctgatggcaact
cggtgctgtatgggccatcgacctctcctcttcttcatcaccctcctcttcactgtgtta
gggagtacagccaaggagcgagccaaacatgctggggactacttcacattgctcagacat
ctgctgaactatgcctataacagtaacatcaacctgccaaatgctgaggtgctgctcaac
aatgagattgactggctgaagaggataagggatgaggttaagaggacaggggagactggt
gtggaggagaccatcctggagggccaccttggagtcaccaaagaacttctagccttccag
acaccagagaagaagtattacattggctgtgagaagggaggagcgaacctcattaaggag
ctgattgatgacttcattttcccagcatctaatgtttacctgcagtacatgaaaagcggg
gaattccccaccgagcaggccatcccagtgtgcagcacccctgcttccatcaatgcaggc
tttgagctcctggtagcactggctgtcggctgtgttcgcaacctcaaacagatagtcgac
actctgactgacatgtactacttaggttgtgaaacattgacagagtgggagtacttgcct
ccggtggggccacggccaaacaaaggctttgtaggactgaagaacgctggggccacctgt
tatatgaactctgtcattcagcagctgtacatgatccctcccatccgcaatggcatcctg
gccatagagggcacaggcactgatgtggatgatgacatgtcaggggatgagaagcaggag
aatgagagtaacgtggatcctcgtgatgaggttttcagctaccatcatcagtttgatgat
aagccctctagtaagtcagaggacaggaaagagtacaacattggggtcctgcgccaccta
caggtcatatttggccatctggctgcatccagactgcagtattatgtccccaggggattc
tggaaacagttcaggttatggggtgagccagtgaacttgagggagcaacacgatgcgctg
gagtttttcaactctttggtggatagtctggacgaagctctgaaagctctgggtcaccct
gccatgctcagcaaggtactgggagggtcctttgctgaccagaagatctgtcagggatgc
ccccacagatatgagtgtgaggagtcattcacaacactcaacgtagacatcagaaaccac
cagaacctgctggactccatggagcagtatgttaaaggagacctgctggagggagccaac
gcctaccactgtgagaagtgtaataagaaggtggacacggtgaagcgcctgctgattaag
aagctgccgccagtcctcgccatccagctgaagcgctttgactatgactgggagcgggag
tgtgccatcaagttcaacgactactttgagttccccagggagctggacatggagccatac
acagtagcgggtgtggccaagttagagggtgatgatgtcaatccggagaaccaggtgatc
caacagaatgagccctctgaacccacgcctccgggcagctccaagtatcgtctggtggga
gtgctggtccactcaggccaggccagcggcggacactactactcctacataatccagagg
aatgggggtgatggtgaaaagaaccgctggtataagtttgacgatggggatgtgactgag
tgtaaaatggacgatgaggaggagatgaagaaccagtgctttggaggtgaatacatgggc
gaggtgtttgatcacatgatgaaacggatgtcgtaccggaggcagaagcgatggtggaac
gcctacatcctattctatgagcgtatggactcactggacaaggacagcgagcttgtcaaa
tacatctcagagctgaccgtctcctccaccaagccacatcaggtcaagatgcctggtgtc
atcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaacagaatgcaatacagc
ctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctatttaaatcct
cctccaggacaagaacatcttctgccagaggcagaggagattgctatgataagtgctcag
ctggctgctaggttcctcttcagcacaggtttccacaccaagaaagtagtacggggtcct
gccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgtacgctat
tggtttgcacacaacgttctgtttgcttaccctaaccggttctccgagtacctgcttgag
tgcccgagtgccgaggtccgtggagcattcgccaagctcatcgtcttcatcgctcacttc
tccctgcaagacggcccctgcccctctcccactgcctcgcctggaccctcgactcagggc
tgtgataacctcagtctcagtgaccacctgttaagagctgtactaaacctcctcagaaga
gaggtttctgaacatggccgtcacctgcagcagtacttcaacctctttgtcatgtacgcc
aacctgggtttggcagaaaagactcagctgctcaaactgaacgttcctgctactttcatg
ttggtcgctcttgacgagggtcccggccctcccattaaataccagtacgctgagctgggc
aagctctacactgtggtttcccagttggtccgctgctgtgacgtctcctcacgcatgcag
tcctccatcaatggtaaccctcctctacctaacccgtatggggacaccaacctgaccgcc
ccagtgatgcctgtgcagcagctggtggcagagatcctgtttgtgcggaccagctatgtg
aagaagatcattgaagactgcagcaactctgaggagacagtgaagctgcttcgcttcagc
tgctgggagaatcctcagttctcctccactgtgctcagtgaactgctctggcaggtggcg
tactcctacacctatgagctgcggccttacctggacttgctgctacagatcctgctcatc
gaggactcgtggcagacacacaggatccacaatgtgctgaagggaattccagatgataga
gatggactttttgacaccatccagcgctccaagaaccactatcagaagcgggcctaccag
tgcatcaagtgcatggtggccctgttcagcaactgctctgtggcctatcagatcctacag
agtaatggtgacctgaagcgaaagtggacgtgggcagtcgagtggttaggggacgagctg
gagaggaggccatacacgggcaacccccagtacacctacaacaactggtcccctccagtt
cagagcaacgagacctccaatggatatttcctggagcgttcgcacagtgcacgtatgaca
ctggccaaggcctgtgaactttgtcctgaagagctcaagtgtactcagggaagcccaggg
aaggaaccagatgaacaggaagcacctgatgatcaagacgcctccccacctgaggacacg
tctctgtacccacattctcctggaaccacccagtttcagcagaacaaccatcctcatggt
cagccgtacaccggacctgctgctcagcacatgaacaacccccagcgtcctggtcctgcc
actgccccgactcccggcccgactccgaccccgacccagaaccagaccccccccacccct
ggcactggccctggacccagtcctggcccaggcccgcgagcacaagagaactgggagagc
accgaggaggtcacccctgcccccgcccctgcctccactgccccggcacctgccccgcct
aaggagtaa
DBGET
integrated database retrieval system
