KEGG   Paralichthys olivaceus (Japanese flounder): 109637955
Entry
109637955         CDS       T06037                                 
Symbol
wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109637955 (wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pov03009]
    109637955 (wdr3)
Ribosome biogenesis [BR:pov03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109637955 (wdr3)
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WDR55 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C NBCH_WD40 DSE1_N Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_NOL10_N PEP5_VPS11_N ASA1 Beta-prop_VPS8 CFAP251_N Utp12 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 WDR54 Beta-prop_ACSF4 RMC1_N Beta-prop_WDR75_2nd WD40_like VPS11_N PAC11 Beta-prop_WDR35_TULP_N Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 109637955
NCBI-ProteinID: XP_019956204
LinkDB
Position
Unknown
AA seq 860 aa
MGLTKQYLRYVTSAVFGVIGSQKANIAYVNLRGGERGRYVAVAACEHVFIWDVRKGEKVL
ILKGQKHEVTFLCPSPDGVHLAVGYEDGAVRIFSLLDGESNVSFNGHKSAVTIIHYDGLG
ARLVTGSKDTDVIVWDIINECGLYRLKGHKDIITQALFLRDKNLLVTSSKDSFVKWWDLD
TQHCFKTMVGHRSEVWGMVLLNQENRLLTGSADSELRAWDINYLEEEKAEGEPKVKKGKT
LLEENDDVEDNEEGVDESPEERILSCKKAGSILREARDRVVSLTSDTRARVVACHGNDSV
LELFTVLTNEEVQRKMTKKVKKAKKKAAKAQEEAGEEAAEPVVEKMLKDEIVRLTNIKAS
SKIRWVDCLSCPGGELKVALLLQNNTIETYSLKTSDKTPAANKTARLTLGGHRTDVRTLA
FSSDNLAILSASGDTVKVWNRSTLQVIRTMSCEYALCSLFVPGDRQIILGTKSGKLQIFE
LASGSLLETVDAHDGALWSLCLAPDQRGIVTGGADKTVKFWEFELINDQGTGQKRLTVKH
TRTLQLEEDVLCVKFSPDHRLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCLDISHD
NTLIATGSADRNVKIWGLDFGDCHRSMFAHDDSVMFLQFVPKTHLFFTAGKDKKIKQWDA
DKFEHIQTLEGHHREVWCLTISPSGDHIVSSSHDKSLRLWERTREPIILEEEREMEREAE
FEESLAKGDEPVVPGETQGEVAPAGKKTVETVKAAERIMEALELYRDENRKKEEHKYACI
HAGKELPPPKPNPILVAFGNISPSRYILDVIKKVRSSELEISLLVLPFPYVPELLTLFNS
YIQQGLEVELVCRCLFFLLK
NT seq 2583 nt   +upstreamnt  +downstreamnt
atggggttgaccaaacagtacctgcgctacgtcaccagcgctgtgtttggagtaatcggc
agccagaaggccaacatcgcatatgtgaacctgcgaggaggagagagggggcgctatgtc
gcagtggctgcatgtgagcacgtcttcatctgggacgtccgaaaaggagagaaggtcctg
atcctgaagggccagaaacacgaggtgaccttcctctgcccttcgcctgatggcgtccac
ctcgccgtcggttatgaggatggcgccgtgcgaatcttcagcctcctggacggagagagc
aacgtctctttcaatggccacaagtcggctgtcaccattatacactatgatggactggga
gcacggctcgtcactggttccaaggacacagatgtgatcgtgtgggacatcatcaacgag
tgtggtctgtacagactgaaaggtcataaagacatcatcacacaggctttgtttctcaga
gacaagaacctcctggtcaccagctccaaggacagctttgtgaagtggtgggacctggac
acgcagcactgcttcaagaccatggtgggccaccgcagtgaggtgtggggcatggtgctg
ctgaaccaggagaacaggctgttaacaggctctgcagacagcgagctccgagcctgggac
atcaactacctggaggaggaaaaagctgaaggtgagcccaaagtgaagaaggggaaaact
ctgctggaggagaacgatgatgtggaagacaatgaggaaggagtggatgaaagtcctgaa
gagcggatcttaagttgtaaaaaagcaggttccatcctgagggaagctcgagacagagtc
gtctcactgacatcagacacgagggccagagtcgtcgcctgccatggcaacgattcagtc
ctggagcttttcactgttctgacaaacgaggaagttcagaggaaaatgaccaagaaggtg
aagaaagcaaagaagaaggcggccaaagctcaggaagaagcaggagaggaggcagcagaa
ccggtggtggagaagatgctgaaagacgagatcgtccgactaacaaacatcaaagcgtcc
tccaagatcaggtgggtggactgcctgtcatgtccaggcggtgagctgaaggtggcgctg
ctcctgcagaacaacaccattgagacctacagcctgaaaacatccgacaaaacccccgca
gccaataagacggctcgtctcacgctcggcggccaccgcaccgatgtccgcaccctggcc
ttcagctcggacaacctggccatcctctccgcctccggagacacagtcaaagtgtggaac
agatcaactctgcaggtgattcgcaccatgtcctgtgaatatgctctgtgctccctcttt
gtgcccggagaccgacagatcatcctgggaaccaagagtgggaagctgcagatctttgag
ttggcctcaggaagcctgctggagactgtagatgctcatgatggagccctgtggtccctg
tgcctggctccagaccagagggggatcgtgacaggaggtgcagacaagacagtgaagttt
tgggaatttgagctgatcaatgaccaggggaccggacagaagaggctaacagtgaaacac
acacgcacgttgcagctggaggaggatgttctgtgtgtgaagttttctcctgatcaccgc
ctgctggccgtgtctttgttagactgcacagtcaaggtcttctacacagacacactgaag
ttcttcttgtcactttatggacacaagctgcctgttctctgtctggacatctcacatgac
aacacgctcatcgccactggatccgccgacagaaacgtgaagatctggggtctggacttt
ggcgactgtcaccgctccatgttcgctcatgacgacagcgtcatgttcctccagtttgtc
cccaagactcatctgttcttcacggcaggaaaagacaagaagatcaaacagtgggacgcc
gataagtttgagcacatccagacacttgagggccaccatcgggaggtctggtgcctgacc
atcagccccagcggtgaccatattgtatcgtcatcccacgacaagtccctgcgtctgtgg
gaaagaaccagagagcccatcatcctggaggaggagcgggagatggaacgagaagcagaa
tttgaggagagcttggccaaaggagatgagcctgtggttcctggagagactcaaggagaa
gtagcacctgctgggaagaaaactgttgagacagtgaaagctgcggagcgaataatggag
gctctggagctttacagagacgaaaacaggaagaaggaagagcacaaatatgcttgtata
cacgcaggcaaagagcttcctcctccgaagcccaacccgatccttgtggcctttggaaat
atttcaccgtcacgctatattttagacgtcataaagaaagtcagatccagtgagctggag
atttctctgctggtgttaccgttcccttacgtccccgagctgctgacgctcttcaacagc
tacatccagcagggcctggaggtggagctggtctgccgctgcctcttcttcctgctcaag
tga

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