Paralichthys olivaceus (Japanese flounder): 109637964
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Entry
109637964 CDS
T06037
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
109637964
NCBI-ProteinID:
XP_019956234
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MHTAARVSSAGCTASTSTEGRTLKTRTRSAGVRLLSSRGSSFKFPVYSPVVSDSLSVEIL
AMAPLPVPFSLTVLQLAALTYVSGGAYYGHKQHPQAYQPVQHHQHMGMGKEGFPQQQYLG
KEVPYMQYPHYRKEQPLLPMHKGKGNARKGGGYNGGQDKGQTIPSGAEGIPQGELGPAGP
PGPEGPPGPPGPPGNGQPGPVGQPGPSGQPGLPGMGKPGLQGLPGKPGGNGEAGPQGEMG
PSGENGPSGQPGPQGPPGPPGLPGIGKPGVQGLPGQPGTKGEPGHKGLPGLPGLPGPKGD
KGMGQPGQPGHKGLPGPHGPAGPRGLPGFGKPGLNGAPGPQGPPGEKGHPGEQGPDGPRG
EGGQPGSPGLPGQGKPGQNGLPGQPGMSGAKGHPGPPGLPGKPGLPGFGKPGLPGPKGDK
GMGGLPGLLGPKGEKGHGGLPGMLGSPGPNGPPGLPGSMGPPGGIGSPGPKGDCGEGGPK
GLDGAQGEPGPPGIPGKDGLTGNNGEPGPRGPPGPSGVKGEDGHKGLPGTPGPPGLPGLK
GHGGLPGEVGPQGPKGIPGMDGAAGPIGPAGLPGSKGDGGPPGLPGSVGEGSPGLPGPIG
PQGKEGPLGPSGKPGQPGPPGPPGPPGATGLSPDMAGVLSVMGPGLDGVKTGSYSKKGKY
DGNGAEVMGVSGLEMPAFTAVATTPFPPVGTPVVFDKLLYNGRQNYNPQTGIFTCDMPGI
YYFAYHIHCKGANVWVALMRNNEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTVYIQLPS
DQASGLYAGQYVHSSFSGYLLYPM
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcatactgctgcccgcgtcagctccgccggctgcaccgcttcgaccagcaccgagggt
cggacactaaaaacacggacacgatctgcgggggttcggcttctttcctcccgaggatcg
tcctttaaattccccgtttacagtccagtggttagcgactctctcagtgtggagatcttg
gccatggctcccctccctgtccccttctcccttactgtgctacagctagcagcactgact
tatgtgagtggtggggcatactacggacacaagcaacaccctcaggcataccagccagtg
cagcatcaccaacatatgggcatgggcaaagaaggctttccccagcaacagtaccttgga
aaagaggtgccttacatgcagtatccacattacaggaaggagcaaccactgctgcccatg
cacaagggcaaaggaaatgctcgtaaaggcggtggatataatggtggtcaagacaaagga
cagacaattcccagtggggctgaaggaattcctcaaggagaacttggtccagctggacca
cctggaccagaggggcctccaggacctcctggacctccaggaaatggacagccagggcct
gtgggacaacctggaccttctggtcaaccaggattgcctggaatgggaaaaccaggttta
caagggctgccaggcaagccaggaggaaatggtgaggctggaccacaaggtgaaatgggt
cccagcggtgagaatggaccatctggacagccaggacctcagggtcccccaggaccacct
gggctaccaggaataggtaaaccaggggtgcagggactaccaggtcaaccagggacaaaa
ggagaaccaggtcacaaaggtctaccaggactaccaggattacccggacccaaaggtgat
aaaggaatgggtcagccaggacaacccggtcacaaaggtctcccagggccccatggacca
gcaggcccaagaggactgcctggttttggaaaacctgggttgaatggggcaccaggccca
caaggaccaccaggagagaaaggacatcctggagagcaaggaccagatgggccacgtggt
gaaggaggacagcctggttcaccaggactccctggtcaaggaaagccaggtcaaaatggc
cttccaggacagccaggcatgtcaggtgccaaaggacatccaggaccaccaggtttgcca
gggaagccaggacttcccgggtttggtaaaccagggctgccaggaccaaagggtgataaa
ggcatgggtgggttacctggactgctaggcccaaaaggagaaaagggacatggaggacta
cctggtatgcttggatcccctggaccaaatggtccaccaggtcttccaggttccatggga
ccaccaggaggtataggttcccctggacctaaaggagactgcggtgaaggagggcctaaa
gggcttgatggagcccagggtgaacctggtcctcctgggatacctggtaaggatggtctg
actggaaacaatggagagccagggccaagaggtccccccgggccaagtggtgtcaaagga
gaagatggacataaaggtctacctggtacccctggtcctccaggacttccagggctaaaa
ggacatggtggattacctggtgaagtcggaccccaaggccctaaaggaatcccaggaatg
gatggtgcagcaggaccaattgggcctgctggtcttcctgggtcaaagggagatggtggt
ccccctggtctaccgggaagtgtaggtgaggggagtccaggtcttcctggtcccatagga
ccccaaggaaaagagggaccattaggaccctctggaaaaccaggtcagcctggccctcct
ggaccaccaggcccacctggagcaactggactgtctcctgacatggctggagtactctct
gtaatgggacctggactagatggtgttaagacaggtagttacagtaagaagggcaagtat
gacggtaatggggcagaagtaatgggtgtcagtgggttggaaatgccagcatttacagct
gtagcaacaactccctttccacctgtggggactccagttgtttttgacaagctcttatac
aatggtcgccaaaactacaacccccagacaggaattttcacctgtgacatgcctggcatt
tattactttgcctaccacatccattgcaaaggagccaatgtgtgggtggctttgatgagg
aacaatgagccagtgatgtatacatatgatgaatacaagaagggtttcctagaccaagca
tcagggagtgcggtactacctttacaacctggagacactgtgtatattcaactgccctca
gatcaggcttcaggactttatgctgggcagtacgtgcactcctccttttctggatatttg
ttgtatccaatgtaa
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