Paralichthys olivaceus (Japanese flounder): 109637968
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Entry
109637968 CDS
T06037
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pov03037
]
109637968 (ift88)
Cilium and associated proteins [BR:
pov03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
109637968 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_19
TPR_6
TPR_7
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_9
TPR_17
ARM_TT21_5th
TPR_CcmH_CycH
MIT
TPR_10
ARM_TT21_4th
TPR-S
DUF2225
ARM_TT21_C
ARM_TT21_N
ARM_TT21_2nd
HAT_PRP39_C
SHPRH_helical-1st
TPR_MalT
TPR_15
Consortin_N
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
109637968
NCBI-ProteinID:
XP_019956240
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MENVHLALEEEEEDLYSGYNDYNPTFDSEELENDAGFQQAVRTSHGRRPPMTAKFPGTAI
GARPLATSFGSRIPLTSSLGRPVTGAVQDGAARPMTAVRAAGYTSSLTRGSTFDPLGQSR
GPAPPLEAKNEDTPEEKIKILEKKVNDLVEESCMAQSIGALQLALEKAKEAGRKERALVR
QREQTGNAEHINLDLTYSVLLNLANQYENNEMYPEALNSYQVIVKNKMFNNAGRLKVNMA
NIYFKQKNYPKAIKFYRMALDQISNAHKEMRIKIMQNIGVVFVRMGQYSDAITSFEHIMS
ESPNIKTGFNLILCYYAIGDRERMKKAFQKLISVPLGIDDEDKYIPSNDDTSSNMVTEAI
KNDKLHQMERDLKVLAEKYIMTSAKLIAPAIETSFATGFDWCVDMVKSSQYVELANDLEI
NKAITYLRQKDFNQVEAVETLKTFEKKDSRVKSAAATNLSFLHFLEKEYEQADRYADLAM
NADRYNPAALINKGNTLFVKQDYEKAAEFYKEALRNDSSCTEALYNLGLSYKKLNRLEEA
LDCFLKLHAILRNSAQVMYQLAHLYELLEDSQQAIEWLMQVISVTPTDPQALAKLGELHD
GEGDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQYFERATLIQPTQVKWQ
LMVASCYRRSGNYQKALETYKDIHYKFPENVECLRFLVRLCTDMGLNEVQEYATKLKKVE
KMKEMREQRVKSGREGSARGRREGREGSGGSADSSHSSNSTKGERLSTRMRSLPASNEPY
EANSPKELDASYVDPLGPQMERPKTGAKKRVEDDDFADEELGDDLLPE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgtgcacctggctctggaggaggaggaggaggatctttactccggttacaac
gactacaatccaacatttgactccgaggagttggagaatgatgcaggcttccagcaagca
gtgaggaccagtcatggaagaagacccccgatgactgccaaatttcccggcaccgccatc
ggagctcggcctttagctacttcatttggatctcggatccctttgacatcttcactgggc
cgtcctgtgactggagctgtgcaggatggagccgcccgaccaatgactgctgtaagagcc
gcaggttacacctcctccctgactcgtggctcaaccttcgaccctctgggacagtccaga
ggccctgccccccctctagaagccaagaatgaggacacgcctgaggagaagatcaagatc
ctggagaagaaagtgaatgacttggtagaagagagctgcatggcacagagcataggagcc
ttacaactggctcttgaaaaagctaaggaggcagggaggaaggagagagcactggtgaga
cagagggaacagactggaaatgctgaacacatcaatttagatctcacctactcggttttg
ctgaaccttgccaaccagtatgaaaacaatgaaatgtaccccgaggccctgaacagctac
caagtcattgtgaagaacaagatgttcaataatgcaggccgactaaaggtcaacatggcc
aacatctacttcaaacagaaaaactaccccaaagccatcaagttctaccgaatggcgctg
gatcagatctccaacgctcacaaagaaatgaggatcaagatcatgcagaacattggcgtg
gtctttgttcgcatgggtcagtactcggatgccatcacgtctttcgaacacatcatgagt
gagagccccaacatcaagacgggcttcaacctcatcctgtgctactacgccatcggtgac
agagagaggatgaagaaggcctttcagaagctcatttcggtccctctgggaatcgatgat
gaagacaaatacatcccatctaatgatgacaccagttccaatatggttaccgaggccatt
aagaatgacaagcttcaccagatggagagagatctaaaagtccttgctgagaaatacatc
atgacctcggccaaactcatcgctccggctattgagacttcttttgccactggatttgac
tggtgtgtggacatggtgaagagttctcagtacgttgagctagccaacgatcttgagatc
aacaaagccatcacctatctcagacagaaagacttcaaccaggttgaggcagttgaaacc
ctgaaaacgtttgagaagaaggacagcagagtgaagagcgctgcagccaccaacctttct
ttccttcacttcctggagaaggaatatgagcaggctgaccgctacgctgatctcgccatg
aacgctgatcgctacaatccagcagcactaatcaacaagggcaacaccctgttcgtcaaa
caggactatgagaaggcagcagagttctacaaagaagcgctgaggaatgactcgtcctgc
accgaggcgctctacaacctgggtctgtcctataaaaaactgaatcgactggaggaggct
ctggactgcttcctgaagctccatgctattctgaggaacagtgcccaggtcatgtaccag
ctggctcatctctatgagcttctggaggattcccaacaggccatcgagtggttgatgcag
gtcatcagtgtaactcccacagacccacaggcactggccaagctgggggagctacacgat
ggggagggggacaagtcccaggctttccagtactactatgagtctttcagatacttccct
tccaacattgatgttattgagtggctcggggcgtattacatcgagacacagttctgtgaa
aaagccattcagtactttgaaagagccacactcattcaaccaacacaggtgaagtggcag
ctcatggtggcaagctgctacagaagaagtggaaattaccagaaagctctggaaacatat
aaagacatccactacaagtttccagaaaatgtggaatgtctgcgtttcttggtgagacta
tgcacggacatgggactgaatgaagttcaagaatacgccaccaagttgaagaaggtggag
aagatgaaggagatgagagaacagagagtgaagtcgggcagagagggcagcgccagaggt
cggagagaaggcagagagggcagcggtgggagcgccgacagcagccacagcagcaacagc
accaagggagagaggctgagcaccaggatgaggtcacttcctgcttccaacgagccctat
gaggccaacagcccaaaagaactggatgcgtcttacgtggatccactggggcctcagatg
gagagaccgaagacgggggccaagaagcgagtggaggacgacgactttgcagacgaagaa
ctgggagacgacctgctgcccgagtag
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integrated database retrieval system
