Paralichthys olivaceus (Japanese flounder): 109638103
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Entry
109638103 CDS
T06037
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03030
DNA replication
pov03410
Base excision repair
pov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109638103 (pole)
03410 Base excision repair
109638103 (pole)
03420 Nucleotide excision repair
109638103 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pov03032
]
109638103 (pole)
03400 DNA repair and recombination proteins [BR:
pov03400
]
109638103 (pole)
Enzymes [BR:
pov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109638103 (pole)
DNA replication proteins [BR:
pov03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
109638103 (pole)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
109638103 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
109638103
NCBI-ProteinID:
XP_019956457
LinkDB
All DBs
Position
Unknown
AA seq
2290 aa
AA seq
DB search
MVFLQNSGRYRADRGQGGGDQDQDDGSSALKRLERSQFTDEMDARFGFDRMKEPGEKTGW
LINMHPAEILDEDKRMISAVDFYFIQDDGSRFKVALPFKPYFYVATKKNCEREVISYLSK
KFQGKVAKLEILPKEDLDLPNHLVGLKRSYIRLSFNTVDDLIKVKREISPAVRKNREKEQ
SNDAYTSMLSSALSGGNVTSTDEDRMSKSISDQLDNIVDMREYDVPYHVRVSINLKIHVA
HWYNVRYRGSTYPPEIVRRDDLVERPDPVVMAFDIETTKLPLKFPDAESDQIMMISYMID
GQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIFVT
YNGDFFDWPFIETRAGLHGLSMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLSYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVMDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTMRHAMEEEEKIPLEQITNFNEVCD
EIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
SCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPSLFPNGPPRAFHNLNREEQAKHEKK
RLADYCKRAYKKTHVTKREERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSS
AQDIGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNIMV
KEGFTNDQYHELVDPGSLTYNTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQPLE
AGQAADIEDFGVPARPLQPAILISTKRKRASQGEDSQVESQDLELTQSWREILGPPPPAG
KTREELLVWLRYHKKKWELQLRQRKERKKRRRLLDGEAQPVGGGVIRDGPTTGLGSFLRR
TARSILDMPWQIVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGATY
KKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCVCMVNKHVVRDLAGREADTFDLENLEMRSLAQFSYLEPGSVRHMYFYHHSQGHKALFG
LFIPSQRKASIFVLDTVRSNQMPNLSNLYTAERTALLEKTTEDLLPPEKHNFEVRAENDP
KAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEISYNV
LDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVEMDLQSLAVNTILQ
SQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASAHASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRLGS
TVVYGNFNRIILCTKKRRTDDAIGYVEYITNSIHSREIFHSLSLSFSRCWEFLMWMDPAN
YGGVKGKLPSNLLFGEEGAKQKKNKRGEGEEEGSEDEDEEEAEVEEDEETDDVEELIESN
WNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQASQQAVG
DLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGTRSVAQPSEMFPVLPGSHLPLNN
PALEFIKYVCQVLSLDANIVNQMNKLKRDLLRLVDVGEFSEDAQFHDPCNSYILPEVICH
HCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYETESVEMALVEALQKKLMSYTLQDL
VCNKCKGVKDANMSLYCRCAGDFDLTFSVKSFSEQITVFQNIATHYNMSFLGETIDWLVM
MNPQVGQSSR
NT seq
6873 nt
NT seq
+upstream
nt +downstream
nt
atggtttttttacaaaacagtggaagatacagagcggatcgaggacaaggtggaggagac
caggaccaggacgatggatcctcggctctcaagcggctggagcgcagccagttcaccgac
gagatggacgcccgcttcggcttcgacaggatgaaggagcccggggagaaaacaggctgg
ctgatcaacatgcaccccgcagagatcctggatgaagacaagaggatgatcagtgctgtg
gatttttatttcattcaggacgatggaagcaggtttaaggtggctctacccttcaagcca
tatttctacgtagctacaaaaaagaactgcgagagagaggtcatctcatacttgtcgaag
aagttccagggaaaagtggcgaagcttgaaattctcccaaaggaggatctagacctgccg
aaccatttagttggcctgaagagaagctacatcagactgtcgttcaacaccgtggacgac
ctcatcaaggtgaagcgtgagatctctccagcagtgcgcaagaacagagagaaggagcag
tccaatgatgcctacacttccatgttatccagtgccttgtcaggaggcaatgtgacctcc
acagatgaagacaggatgtcaaagagtatctcagaccagttggacaacatcgtggacatg
agggagtacgacgttccctatcatgtgcgagtgtcaatcaacctcaagatccacgtggct
cactggtacaatgttcgatacagaggcagcacttacccaccagagattgtacggagagac
gatcttgtggagcgaccagatcctgttgttatggcttttgacattgaaacgaccaaactt
ccactgaagtttccggacgctgagtcagaccagattatgatgatctcctacatgatagac
ggacaggggtttctaataacaaacagagagatcgtctctgagaacattgaggattttgag
ttcactcccaaacctgagtatgaagggccgttcactgttttcaatgaggatgatgaggcg
gctctgattcagaggtggtttgatcacgttcaagaaacgaagccaaacatctttgtaaca
tacaacggagacttcttcgattggccttttattgagacccgggccggcctccatgggctg
agcatgcacagggagatcggtttccagaaggacaatcagggagagtacaagtccagtcag
gccatccacatggactgcttaaggtgggtaaaaagagacagctaccttccagtgggaagt
cacaatctgaaggcagcagcgaaggctaaactgagctacgacccggtagagctggatcca
gaggagatgtgccgcatggcgacagaggagccgcagactttggcgacgtactctgtgtct
gatgctgtggccacatattacctgtacatgaaatatgttcatcccttcatcttcgctctg
tgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggactctgtgt
gaggccttgctcatggtccaggcctttcacgccaacatcgtcttccccaacaagcaggag
caggtctttaacaaactgacagacgacggccacgtcatggactctgagacgtacgtgggc
ggccacgtggaggcgctggagtccggagtgtttcgtagtgacatcccctgccgtttcaaa
atgaacccggctgcattcgacttcctgcttcaaagagttgagagaacgatgcgtcacgct
atggaggaagaggagaaaatccctctggagcaaatcacaaactttaacgaggtctgcgat
gagataaagaagaagctgatttcactgaaggaggttccaaacaggatcgaatgccccctc
atctaccatctggatgttggggctatgtaccccaacatcattctcaccaaccgactgcag
ccatctgctatggttgacgaggccacgtgtgctgcctgtgactttaacaaacctggagcc
tcctgtcagaggaggatggcctggcagtggagaggagaaatcatgcctgccagtcgcagt
gagtttcaccgtatccagcagcaactggagtcagagaagttcccgtcgctgtttcccaac
ggtccacctcgcgctttccacaatctgaacagagaggagcaagccaagcatgagaagaaa
cgtttggcagactactgtaagagagcctataagaagacacacgtcaccaagcgggaggag
cgcgtcaccaccatctgtcagagagaaaactctttctatgtggatactgtgagagctttc
agagatcgacgctacgaattcaaaggactccacaaggtgtggaagaagaaactgtcctca
gctcaggacattggagacgctgcagaggtgaagcgctgcaagaacatggagatcctgtac
gagtctcttcagctcgctcacaagtgtattctcaactccttctacggctacgtcatgagg
aaaggggcgcgctggtattccatggagatggccggcattgtgtgctacaccggagccaac
atcatcactcaagccagagagctgatcgaacaaatagggaggccattggagttggacacc
gatggtatctggtgtgtcctccctaacacctttcctgagaattttgtagtgaagacgagt
aatgaaaagaagcccaaggtgaccatctcctacccgggggccatgctgaacatcatggtg
aaggagggattcaccaacgaccagtaccatgagctggtcgaccccgggtccctcacctac
aacacacggtcagagaacagcatcttctttgaggtggacggaccgtacctggcaatgatc
ctgcccgcctcaaaagaggaaggaaagaagctgaagaaaaggtacgctgtgtttaatgag
gacggctctcttgctgagctcaagggttttgaagtgaagagaagaggagagctccagctc
atcaagatttttcagtcctcagtgtttgaggctttcctcaaaggtaccactttggaggaa
gtctatgcatcggtggccaaagtggccgactactggctggacgttctgtacagcaaggct
gccaacatgccagatgcggagctgtttgaactgatttccgagaatcgttccatgtccagg
aagctggaggactacggagagcagaagtccacgtcgatcagcaccgctaagagactcgct
gagttcctgggagatcagatggtgaaagacgctggtctgagctgtcgctacgtcatctcc
cgaaaaccagagggttcacctgtcacagaaagagccattcctctggccatcttccaggca
gagcccagtgtgaagaaacatttcctccgtaagtggttgaagatgccgagcctgcatgac
ttggacatccgctctatcctcgattggagttattacattgagaggttgggtagtgccatt
cagaaaatcatcaccatccctgcggctctgcaacaggtgaagaacccagtgccccgagtg
agacatccagactggcttcacaagaaactcctggagaaaaacgacatttacaagcaaaag
aaaatcagtgaactgttcaccagtgagggcaagagacaggtggcccaccagcctcttgaa
gcaggccaagctgcagacattgaggacttcggtgtgccagccagaccactgcaaccggcc
atcctcatcagcaccaagcggaagcgagcttctcagggagaggacagccaggtggagtct
caggacctggagctcactcagtcctggcgagagatcctgggaccacccccacccgcggga
aaaacacgggaggagcttttagtatggctgcgctaccacaagaagaagtgggagctgcag
ctgaggcagaggaaggagagaaagaagaggaggaggctgctggatggtgaagctcagcct
gtaggtgggggagtgatcagagacggccctaccaccggccttggcagcttcctgcgcaga
acagcacgcagcattctggacatgccctggcagattgtgcagatcgcagagaccagtcac
cctggtctgtacaagttgtgggctgtgattggtaatgacctccactgcatgaagctcaac
atcccccgtgtcttctacgtcaatcagaaagtcccaaaacaagaggagggagccacgtac
aagaaggtgaaccgcatgctgcctcgctccaacattgtgtactacctttatgagtactgt
gtgccagaggacatgtaccaggagcacatcaatgagatcaatgcagacctgtctgcacca
gacatcgaaggagtctacgaaacacaggtccccttgctgtttcgggctctggtgcagctt
ggatgtgtgtgtatggtcaataaacacgtcgtgagggatctggccggcagggaggcggat
acttttgacctggagaatctggagatgaggtctctggcccagttcagttacctagagcca
gggagcgttcgccacatgtacttctatcatcacagccagggacacaaagctctgtttgga
cttttcatcccctcccagcgcaaagccagcatcttcgtcttggacacagtgcgaagcaac
cagatgccaaacctgagtaacctttacacagcagagcgcaccgccctcctggagaagacg
acagaggatctccttcctccagagaaacacaacttcgaggttcgagctgaaaatgaccca
aaggctatttaccgtgcactgcagcgcattctgctcaactacaaggaggaacgtcgtggg
cccaccctcatcgctgtgcaatcaaactgggagctgcgtcgattggcagcggggatgccg
gtgcttgaggagtttcctgtggttccagtgcatgtggtcgacgagatcagttataatgtt
ctggattggcaacgccacggtgcccggcgcatgatccgtcactacctcaacctggacagc
tgcctgtcgcaagctttcgacatggccaggtattaccatttgcctgtgggaaacttgcct
caggatgtgtccatcttcggttcagacttgttcctcgcgagacatctacggaaacacaac
cacctgctgtggctgtcacctacagccagacctgacctcgggggaaaagaggctgatgac
agccgtctggtcatggaaagcgatgacagaggttctgtggagatcaacgctcaaggatgc
tattccaccgtttgtgtggagatggacctgcagagcctggcagtgaacaccatcctccag
tcgcagcatgtcaacgacatggagggtggagccagtctgggcgtcagtttcgatgtgatc
cagcaggcctcgttggaggacatgatgtcaggaaatcagggggcgagcgctcacgctagc
tatgatgagactgctctctgctccaacaccttcaggatcttgaagagcatggtggtggga
tgggtcagggagatcactcagtaccacaacgtgtacgccgacaaccaggtgatgcacttc
taccgctggctgcgctccccgagctctctgctgtatgaccctgctctgcatcgcaccctg
cacaacatgatgaagaaggtgtttctacagttggttgcagagtttaaacgtcttggctca
actgtggtgtacggaaacttcaacaggatcatcctgtgtactaagaaacggaggacagac
gatgcaattggctacgtggagtatatcactaacagcatccactccagagaaatcttccac
tctttgtccttgtccttctctcgctgctgggagttcctgatgtggatggacccagccaac
tatggcggcgtgaaggggaaactgccttccaacctcttgtttggggaggaaggagccaaa
cagaagaaaaataaacgaggggagggtgaagaggagggcagtgaggatgaagatgaggag
gaagcagaagttgaggaagatgaagagacggatgatgtagaggagttgatcgagagcaac
tggaacatcatgcagtacctgcctcaaacagcctcctgtcagaaatacttcctcatgatc
gtctcagcctacattgcagctgtgtaccacagtatgaaagaggagctgagacgtaatgct
cctggagcaacaccagttaagagacgtggaggcagccaggcttcccagcaggcagtggga
gacctgagtgctcttcctggaatgatctccttctcccaggaatacgtgtccagtgagctg
acacagaactttttcaccatcactcaaaaaatccagaagaaggtgacaggcactaggagt
gtggcgcagccctcagagatgttccctgtcctgcctggatcccacctgccactcaacaac
ccagcactggagttcatcaaatatgtctgccaggtcctctcactggacgccaacatagtg
aaccagatgaacaagctaaagagggacctcctgcgtcttgtggacgtcggagagttttca
gaggacgctcagttccatgatccctgcaactcctacatcctaccagaggtcatctgccac
cactgtaatttctgtcgtgacctcgacctctgcaaagacccatccgtggcacaggacggg
tctgtcttacctcagtggttctgctccaactgccaggcccagtacgagactgagtctgta
gagatggctctggtggaagctctgcagaagaagctgatgagctacacactgcaggacctg
gtgtgtaacaaatgtaaaggcgtgaaggacgcaaacatgtccctctactgcagatgtgct
ggagactttgacctcactttctcagtcaagagcttctccgagcagatcacagtgtttcag
aacatagccacccactacaacatgagcttcctgggggagaccattgactggctggtcatg
atgaatccacaggtcggacagagctctcgctga
DBGET
integrated database retrieval system
