Paralichthys olivaceus (Japanese flounder): 109638211
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Entry
109638211 CDS
T06037
Symbol
usp39
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109638211 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109638211 (usp39)
Spliceosome [BR:
pov03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109638211 (usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109638211
NCBI-ProteinID:
XP_019956642
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MMVSLKREREVEVDDDDSDDGVAAKVGRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCS
ISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSS
LEDITYVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSN
VPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVL
CSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPCEXENXRCFLLRFRSLTXQFFPPE
EKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFTGSTEK
EYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEA
QATEKCTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVIDILPQMITLSEAY
IQIWKRQECADDTNNHTEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatggtttctctgaaacgagaaagagaagttgaggtggacgacgacgacagcgacgac
ggagtggcagctaaagtaggacgaggacgtgtagtagaagaccggagaagtcgccactgc
ccgtatctagacaccataaacaggagtgtgttggactttgactttgagaagctctgctcc
atctctctgtcccacatcaacgtctacgcctgccttatatgtgggaaatacttccagggt
agaggactgaagtcccatgcctacacccacagcgtacagtttacccaccatgtgttcctc
aatctgcacacactcaagttttactgtctgccagacaactacgagatcatcgactcttca
ctggaggacatcacttatgtgctaaagccaactttcaccaagcagcacatttcaggactg
gacaagcaagggaaactgtaccgagcctatgatggtacgacatacctaccaggcattgtt
gggctcaacaacatcaaagctaatgactatgccaacgtggtgttacaggctttttccaac
gttccacctttgcgaaactacttcctggaggaggaaaactacagaggaatccgcaggcca
ccgggggacatcatgttcctcctggtgcagaggtttggggagctgatgcgcaaactttgg
aatccaagaaacttcaaggcccacgtgtctccccatgagatgcttcaggccgtggtgctg
tgcagcaagaagaacttccaaattaccaaacaaggagatgctgtggacttcatgacgtgg
ttcttgaatgctctgcatggggcgcttggaggcacaaagaaaaagccatgtgagtaggag
aattaaagatgttttctcctacgtttcagatcactcacatgacagttttttccaccggag
gagaaagaggcattacttgtgacggaggaataccaggaacagatgtctgagtccaccttc
ctgtttctgacacttgacctcccaacagctccactgtacaaggatgagaaagagcagctt
atcatcccccaggtccctctcttcaacatcctgggcaagttcactggcagcacagagaag
gaatacaaaacctacaaagagaattttctcaaaaggttccagttgaccaaacttcctccg
tacctaattttttgcatcaaaagattcaccaagaacaacttctttgtggaaaagaaccca
acaattgtcaacttccccatcacgaacgtagaccttcgtgagtacttgacagaagaagct
caagctacagagaagtgcacaacttatgacctcgtcgccaacgtagtgcatgatgggaaa
cccactgagggagcgtacagaatacatgttctgcatcacggaactgggaagtggtacgag
atgcaggaccttcaggtgatcgacattctcccccagatgatcacgttgtcagaagcctac
atccagatctggaagagacaagagtgtgctgatgacacaaacaaccacacagaggcgtaa
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