Paralichthys olivaceus (Japanese flounder): 109638241
Help
Entry
109638241 CDS
T06037
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109638241 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109638241 (herc3)
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109638241 (herc3)
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
HECT type E3
109638241 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
EKLF_TAD1
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
109638241
NCBI-ProteinID:
XP_019956690
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MLCWGNARDGQLGIGLERNPLFEPKNCHVFMGRGLKDVACGGQYSMFLLYDGSVYTCGSN
SCGQLGHDKPGTSPELVGALDTQKITNVSSGRAHSMAVNEKGQVFAWGAGEGGQLGLGTA
EVAVRIPRLVKRLCDHHISQVMCGNQHCIALSRDGQLFTWGQNASGQLGLGKGEPSKLFP
HPLKSLAGIPLAQIIAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRS
QKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSSNNELLPRRVLELMGTEVSQITC
GRHHTLAFVPSSGLVYAFGCNSHGQLGTGILGDARSPFPVKTSLLTAHFHRPVTKVICGG
DHSFLLYSNEQSSVPPEDFRVINISKSLAPINFERLNSWRLKLMYNTDSSVTNDIIIQLS
STACWNASFLDQSDDIHFKTNPKIPGIDLNSVRLLFEALSKPAFSGLLEQATKSFESLLI
PQLPHSPPDVEAMRIYLILSECPALQDSKNYIRLTIPLAMAILRLDANPSKVLDNWWCFV
EDSVFTRMVDMYKSIIVFMLTGGKTLLVPMFYENYFLAALRLLEKLHKVNLKAQHVEYSR
FYIPDITSLVDIQEDYLKWFLSKAEIKVGSSPSQSDFPSVNLCAYPFILNAQAKTTMLQT
DAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVIHVRRNHLVSDTLRELTMYSDVDLK
KPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDKCFVEENWF
HLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSPMLEDFKELSPTEARSLQQLLDYEGGD
VEETFLLNFAITRENYGMTEVKELIPGGESISVDKNNRKEFVEAYLCYVFSDSVSEQYSA
FSSGFLKVCGGEILALFQPSELMAMVVGNNNYNWEEMEKNAAYKGEYTATHPTVRLFWEV
FHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIIIQSTTAEEHYLPVAHTCYNLLDMPRYQ
TKEILCRRLTQAVEQYEGFSLV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgttgggggaatgcaagggatggacagctgggtattggcctggagaggaacccc
ttgtttgagccaaagaactgtcatgtgttcatgggcaggggactgaaggatgtcgcgtgt
ggaggacaatactcaatgttcctgttgtatgatggcagcgtgtacacatgtggctctaac
agctgtggacagctgggccacgacaaaccagggacttccccagagctagtcggcgctctg
gacactcagaagattacaaatgtgtcgagtggtcgagcccattctatggcggtgaatgag
aaaggtcaagtatttgcctggggagctggtgaagggggtcagctcggcctggggactgca
gaggtggctgttcgcatcccaaggttggtcaaaagactgtgtgaccatcacatctcccaa
gtaatgtgtggaaatcagcactgcatcgcactttctcgagatggccagctattcacatgg
ggccagaatgccagcggtcagctcggcctgggaaaaggagaacccagcaaactgttccct
catcccctgaagtctctggctggaattcctttggcacagatcatcgctgggggagaccac
agcttcgctctctccttgtccggagctgtgtttggctggggcaaaaacagagcgggacaa
ctgggactcaatgataaacaagatcgtgccgtcccctgccacatcaaatttttgagatct
caaaaagttgtttacatcagttgtggagatgaacatacagcagcactcacaaaggacggt
ggattgtttacgtttggcgatggctcctggggtcagctgggccacggctccagcaacaat
gaacttttacccagacgagtgctggagctcatgggtactgaggtgtcccagatcacctgt
ggcaggcaccacacattggcgtttgtgccgtcctctggattggtgtatgcattcggttgt
aacagccatgggcagcttggcacaggaatactgggggatgctagaagtccatttcctgtg
aagaccagtttgttgactgctcatttccatagaccagtgaccaaagtcatctgtggagga
gaccatagtttcttactgtactctaatgaacagagctcagtccccccagaagacttcaga
gtgatcaacatcagcaaaagcctcgccccaatcaattttgaacggttaaattcatggagg
ttaaaactgatgtacaacacagattccagtgtcacaaacgacattatcattcagctgtcc
tccacagcttgttggaatgccagcttcctggaccaaagtgatgacatccacttcaaaacc
aacccaaagatcccgggcatcgatctcaactctgtcagacttctgtttgaggcactcagc
aaaccggccttctctgggcttctggagcaggccaccaagagttttgagagtctgttgatc
cctcagctgccgcactctcctcctgacgtcgaggccatgaggatctacctcatcttgtct
gagtgtccagcgctgcaggactcaaagaactacatccgcctcactatccccttggcgatg
gccatcctccggctcgacgccaaccccagcaaagtattggacaactggtggtgttttgtg
gaggacagcgtgttcaccagaatggtcgacatgtacaagagcatcatcgtgtttatgctg
acgggaggaaagacgctgctcgtgccaatgttttatgagaactactttcttgcagcacta
aggctgctggaaaaactccacaaggtgaacttaaaggcccagcatgtggagtacagccgc
ttttatatccccgacatcaccagcctggtggacatccaggaagactacctcaaatggttt
ctgagtaaagctgagattaaagtgggatcatccccttcgcagagtgactttccctcagtg
aacctatgtgcctatccgttcatactgaacgcccaagccaagacaaccatgctgcaaaca
gatgctgagctgcagatgcagatggcagtaagcggagcaaacctacacaacgtcttcatg
ctgctcacactggaaccccaccttgccagaaatccttacctggtgatacacgtgcgcagg
aaccatttagttagcgacaccctgcgtgagctcaccatgtactctgacgtggacctgaag
aagccactaaaggtgatcttcgatggagaggaggccgtggacgcaggcggagtaactaag
gagttcttcctgctgctgttaaaggagctgatggatcctgtttatgggatgttcactcac
tacaaggagtccaacctgctgtggttctcagacaaatgttttgtagaagagaactggttt
cacctgatcgggatcatctgcggtctggccatctacaactccactgtggtggacctgcac
ttccccctggctctctacaagaagctgctggatgtgtcaccgatgcttgaagacttcaag
gagctctccccaaccgaggccaggagtctacaacaacttctagactatgagggaggtgac
gtggaggagacgtttcttctcaactttgctatcaccagggagaactacggcatgacagaa
gtgaaggagctgatcccaggaggagagagcatcagcgtggacaaaaacaacaggaaggag
ttcgtggaggcctacctgtgctacgtgttctctgactcggtgagcgagcagtactcagcc
ttctcctcaggtttcctgaaggtgtgtggaggcgagatcctggcgctgttccagccgtct
gagctgatggccatggtggtcggcaacaacaactacaactgggaggaaatggagaagaac
gctgcttacaaaggggaatacacagccactcatccaacagtccgattgttctgggaggtt
ttccacgagttccctctggagaagaagaagcagttcttgttgttcctgaccggcagcgac
cgcatccccatccacggcatggagagcctgcgcatcatcatccagtccaccacggccgag
gagcactacctgccggtggcccacacctgctacaacctgctggacatgccccgctaccag
accaaagagatcctgtgccgccgtctcactcaggccgtggagcagtacgagggcttcagc
ctggtctga
DBGET
integrated database retrieval system
