Paralichthys olivaceus (Japanese flounder): 109638306
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Entry
109638306 CDS
T06037
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109638306 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109638306 (smarca5)
03036 Chromosome and associated proteins [BR:
pov03036
]
109638306 (smarca5)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
109638306 (smarca5)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
109638306 (smarca5)
RSF complex
109638306 (smarca5)
WICH complex
109638306 (smarca5)
B-WICH complex
109638306 (smarca5)
NORC complex
109638306 (smarca5)
BRF complex
109638306 (smarca5)
NuRF complex (fruit fly)
109638306 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
109638306
NCBI-ProteinID:
XP_019956772
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MSANEICVEQREEQAEVEEAGGAEEKSDSSDAGKESSSDAGPDGQDASSSSAKDSAPGYE
EKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSAGEL
SLLDSNRHRRTEQEEDEELLNESTKTTNVCARFDESPSYVKTGKMRDYQVRGLNWLISLY
ENGINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSL
RAVCLIGDREQRTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKN
EKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNCL
GDQKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDIL
NSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLAVNSGKMVVLEKLLPKL
KEQGSRVLIFSQMTRVLDILEDYCMWRNYAYCRLDGQTPHEERQISINAYNEPNSPKFIF
MLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEE
RIVERAEMKLRLDSIVIQQGRLVDPNANKLGKDEMLSIIRHGATHVFASKESEITDEDID
EILERGERKTMEMKEKLSSLGESSLRNFTMDTENSSVYTFEGEDYREKKKVITNWIEPPK
RERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKT
IGYKVPRNLDMPNSAQVQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWNKRDFNQFIK
ANEKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRI
SIKKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQ
CIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTGSAQK
RKSEGTPDGRGRRKKLKL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaacgaaatctgcgtggagcagcgggaagagcaggctgaagttgaagaagcc
ggaggagcggaggagaagtctgactcttcagatgctggaaaagagtcctcctcagatgcc
ggtcctgatggacaggatgcatcatcttcctcagctaaagattctgctccaggttacgag
gagaaagtgcaaacagaccggaccaacagatttgagtacctgttgaagcaaacagagttg
tttgctcatttcatccaaccagctgcacagaagacccccacctctccactgaagatgaaa
ccaggacgtcctcgcataaagaaagatgagaaacaaaacctgctgtctgctggagaattg
tctctgttggacagcaaccgccatcggcgcacggagcaggaggaggatgaggagctcctg
aacgagagcaccaagacgaccaatgtctgcgctcgttttgatgaatctccctcttatgtc
aaaacaggaaaaatgagggactatcaggtccgtggtttgaactggctcatctctttgtat
gaaaatggcatcaatggaatccttgctgatgaaatgggtttgggtaaaactctccagact
atcgctctgctgggttatatgaagcactacagaaacatcccgggtccccacatggtgctg
gtgcccaagtccaccttatacaactggatgaacgagttcaaacgatgggtgccttctctt
cgtgcagtctgcctgatcggagacagagagcagaggactgctttgatcagagatgtgctg
ctgccaggagagtgggatgtgtgtgtcacatcctacgagatgctcatcattgaaaaggct
gtgttcaagaagttcaactggaggtacctcgtaatcgacgaagcccacaggatcaagaat
gagaaatcaaagctatcagaaattgtacgagaattcaagaccaccaatcgtttactgctg
actggaacaccccttcaaaacaacctccacgagctgtgggctctgctcaactttctgctg
cctgacgtctttaactcagcagaggactttgactcctggtttgacacaaacaactgcttg
ggtgaccagaagttggttgaacgtcttcacactgttctacgtcctttcttgcttcggcgt
attaaagctgacgtggagaaaactttgcttccaaagaaagagatcaagatgtacgtgggc
ctgagcaagatgcagcgagagtggtacacaaagattctgatgaaggacattgacattctg
aactcagcgggtaagatggacaagatgcgcctgctgaacgttctcatgcagctcaggaaa
tgttgcaaccacccgtacctgttcgacggagctgagccaggtcctccgtacacaactgac
ctccatctggccgtgaacagcggcaagatggtggtgctggagaagctgctacccaagttg
aaggagcagggttcccgtgtgctcatcttcagtcagatgaccagggtgctggacatcttg
gaggactactgcatgtggaggaactatgcatactgtcgcttggatggtcagacgccgcac
gaggaaagacagatctcgatcaacgcatacaatgagcccaacagccctaagttcatcttc
atgttgagcaccagggccggtgggctgggtatcaacctggctacagccgacgtcgtcatc
ctctacgactcagactggaaccctcaagtcgacctgcaggccatggaccgagctcacagg
attggtcagcagaagcaggtacgtgtctttcgtttcatcaccgaaaacacagtggaggag
aggatcgtagagagggccgagatgaaactgcgcctggactccattgtcatccagcaagga
agacttgtggatccgaacgcaaacaagctgggcaaggatgagatgctgtccatcatccgt
catggtgccacacacgtgttcgcttccaaagagagtgagatcacagatgaggacattgat
gaaatcctggagagaggtgaaaggaagaccatggagatgaaggagaaactgtcgtctctg
ggtgagagctctctgagaaacttcaccatggacacagagaacagtagtgtgtacacattt
gaaggagaggactacagagagaagaaaaaggtcattaccaactggatcgagccgcccaag
agagagaggaaagccaattacgctgtggatgcctactttagagaagcgctgcgtgtcagt
gaacccaaagcacccaaggctcctcgtcctcccaagcagccaaatgtccaggacttccag
ttctttcctcctcgtctctttgagcttcttgaaaaggaaattctcttctatagaaagacc
ataggctacaaggttccccgtaacctggacatgccaaactctgctcaggtgcagaaagag
gagcaggctaagattgacgaggctgaggctctcacagaggaggaactggaggagaaggag
aacctgctgcaacagggatttactatttggaacaaacgggacttcaaccagttcatcaaa
gccaacgagaagtggggaagagatgatatcgagaacatcgccagagaagtggagggaaaa
acccctgaagaagtcatggaatattctgctgttttctgggagcgctgcaatgagcttcag
gacatcgagaagatcatggcccagatcgagagaggagaagccaggattcagagaaggatt
agcatcaagaaagcacttgactcaaagattggtcgctacaaggctccattccatcagctt
cgtatttcctacggcaccaacaaaggcaagaactacacagaggaagaggaccgcttcctc
atctgtatgctccacaagctgggcttcgacaaggagagtgtgtacgatgagctgcgtcag
tgcatccgtaactcacctcagttccgattcgactggttcctcaagtccaggaccgccatg
gagcttcagaggcgatgtaacaccctaattacgctgatagagagagagaacatggagctg
gaggagagggagaaggcggagaagaagaaacgaggtccaaagactggatcggctcagaaa
cgaaagtcagagggaaccccagacggtcgtggacgcaggaaaaagctcaagttgtga
DBGET
integrated database retrieval system
