Paralichthys olivaceus (Japanese flounder): 109638556
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Entry
109638556 CDS
T06037
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109638556
04121 Ubiquitin system [BR:
pov04121
]
109638556
Transcription factors [BR:
pov03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
109638556
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
109638556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
DBD_Tnp_Hermes
RGM_N
Motif
Other DBs
NCBI-GeneID:
109638556
NCBI-ProteinID:
XP_019957184
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MAASNTVATRTKTSKVWEHFSLDTANKKITCKVCKADLAYHGSTSVMHEHLKRKHVGQMN
ETESDSPRPKKRATMDPFLQKRQMCTPQRATALTESVLQMLIYDMRPLSVVDGAGFQQMI
DQFNPDYILPSRTHFTHLMEQKYNWQMKTLNLATLPLEERHTAANIMIWMEEVIEKFDIL
PSKIKAIVHDNRSNMVAAAQLLEEKHGWSSVRCAGHTLQLVVNSALKEPSINKATGAARS
LVEHFRRSELANSKLKKKQQQINTAEHKLIXDVSTRWNSTYYMVERLLEQRWPVTATLSD
PEVTPRGKHYFDLKPEQWVLLEELVQGLGXFXCATVFLSGXEYATASCLPQLVKGLQRSI
QQTQFETSSGKAFLAIAGKGISERWENLNTVSAERDNPXVLAAAIDPRFRKMKFISPEDG
TRVQSTVEVLAIKEAKAETGIYDDPELEQKRRGNVPGAKSALDNLLQSDTDSLSDEEEET
QEDKKIQMVRRXVQXFFTEAPIAKKDDPLSWWRENEGRFPTLSNLARSLLCIPATSTLAE
RIFSAAGNICSQKRASLTREHVDMLTFLSMNKLNDIA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccaacacagtagctacgcgtaccaaaacatctaaagtttgggagcatttt
agcctggatacggcgaataaaaagataacttgcaaggtttgtaaggcagaccttgcgtat
cacggcagcacctccgtgatgcacgaacatttaaagagaaagcacgtcgggcagatgaac
gaaacggagtctgactcgcctcgtccgaagaagagggccaccatggatccctttctgcaa
aagaggcagatgtgcaccccgcaacgggcgactgccctcactgagtcagtattgcagatg
ctgatctatgatatgaggccgctttccgtggtcgatggtgccgggtttcaacagatgata
gaccagttcaacccagactacatcctgccatccagaacccatttcacccacttgatggag
cagaaatacaactggcaaatgaagactttgaacctcgccactctacctctggaggagagg
catactgctgcgaacatcatgatatggatggaagaggtgatagagaaatttgacatcttg
cctagcaaaattaaagcaatagtacacgacaacaggtctaacatggtggcggcagctcaa
ctcctggaagaaaaacatggttggtcttcagtccgctgtgctgggcacaccctccaactt
gtcgtcaacagtgccctcaaagagcccagcatcaacaaagctactggtgctgcaagaagc
ttagtggagcactttaggagaagtgagctggcaaattcaaaactgaagaagaagcagcag
caaatmaacaccgcagagcacaagctgatccwggacgtcagtacacgatggaatagtact
tattacatggtggagagactcctggagcagcgctggccagtcactgcaactctctctgac
cctgaggtaacaccaagaggcaagcactactttgacctgaaaccagagcagtgggtgcta
cttgaagagctggtgcaagggttggggscttttyaatgtgctaccgttttcctcagtgga
raggagtatgctactgcttcatgtcttccacagctggtcaaagggctgcaacggtccata
cagcaaacccagtttgagacgagctcaggaaaagcctttctagccattgcaggaaaagga
ataagtgagagatgggagaatcttaacactgtgtctgcagagagagacaacccasttgtt
cttgcagctgccattgatccaagattcagaaagatgaagtttatctcacctgaagatggc
acaagggtgcaaagtacagttgaggttcttgccataaaagaagcaaaggccgagactggg
atatatgatgaccctgagctagagcagaagaggaggggtaatgtcccaggggcaaagtca
gcgctggataaccttcttcagtctgacactgacagtctgagtgacgaagaggaggaaacc
caggaggacaaaaaaatccaaatggtyaggagggkagttcagamgttcttcacagaggca
ccaatagccaaaaaggatgaccctctcagctggtggagagaaaatgaggggcgttttccc
acactgtcaaacctagcaagatctcttctgtgcattcctgcaacatccaccctggcagag
cgaatcttctcagcagcaggaaatatctgctckcagaagagagcaagcctcacacgagag
catgtggatatgctgacttttcttagtatgaataaactgaatgacatagcctga
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