Paralichthys olivaceus (Japanese flounder): 109638589
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Entry
109638589 CDS
T06037
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pov01009
]
109638589 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109638589 (stau1)
Protein phosphatases and associated proteins [BR:
pov01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109638589 (stau1)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
109638589 (stau1)
mRNA cycle factors
Stress granule specific factors
109638589 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
109638589
NCBI-ProteinID:
XP_019957195
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MSQLQFQCPSSPMPAAPAPLQLGQPQPGYSIPCASGTLPSESASQPIRSSALPAGSATPY
NTTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFSVRLTLGDQHWEAE
GTSIKKAQHSAAASALAETTLPKPTMRTPRNTGKNPVDGMTHTMELNALCMKLGKKPMYK
PIDPYPGMRPPNFNYNVRAPGPYQRSMQQYYYPFPPVGPMLYHMELSIGGQQFVGKGRTR
QLAKHDAAAKAMKVLQKEPILQQLPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEVL
KEEGPPHMKSFLVCVTVGEFTGDGEGKSKKIAKKLAAAAVLMALKRLPHIPSVEKTLPRI
KKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVTV
CGQSAEGLGPSKKVAKRNAAEKMLDLLGYKVPQPQPPKPALKTDEKTPVKKPGDGRKVTF
FEPGSVEDMALISKEEDYRLPYLSHQQLPAGILPMVPEVAQAVGACQGSQVNRPLPNPGK
ATITAMIANELLYAGASLTAETILKNKNNLNQLPHGPLTRPSEQLGYLASVQALQVEYKD
FPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLAELDQQSNERTGNGP
VSGCGKQEMEGDMHLKQANSSTLAQTLDGTV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctccagtttcagtgtccatctagccccatgccggctgcacctgccccactg
cagctggggcagccacagcccggttacagcatcccctgtgcctcaggcaccttaccctca
gagagcgcgagccagcccattaggagctccgccctccctgcaggctctgccaccccctac
aataccacagtatctaacatggcaaaccctaaagagaagacccccatgtgtttggtgaat
gagttagcccgtttcaacaagatccaacctgagtataagctgctttgtgagcaaggacct
gctcactccaagattttctcagtgagactcacactgggagatcagcactgggaagcggag
gggaccagcatcaagaaagcccagcattccgctgccgcttctgccctcgctgagacaacg
cttcccaagcccaccatgaggacaccccgcaacacaggcaagaacccagtagatggcatg
acacacactatggagttgaacgcactatgtatgaagcttggtaaaaagcctatgtataaa
cccatcgacccatacccggggatgagaccaccaaacttcaactacaacgtccgagctcca
gggccgtaccaacgctctatgcaacagtactattacccatttcctccagtgggaccgatg
ttatatcacatggagctttccattggaggtcagcagtttgttggaaagggacgcacgcgg
cagttagccaaacacgacgctgctgccaaggccatgaaagtgctgcagaaggagccaata
ttgcaacagttgccagtgatgaatggagagccggaggaggagaacctcaacaaatcagaa
atcagtcaagtttttgaaatagcacttaaacgcaacttacctgtcaactttgaggtttta
aaggaagagggccctccacacatgaagagtttcttagtgtgtgttacagtcggggagttc
actggcgacggcgagggaaagagtaaaaagattgccaagaagctggcggcagcagcagtg
ctgatggcgttgaagaggctaccccacatacctagcgtagaaaagacgttgccacgcatc
aaaaagaaaaccaaatccattatcaagctgcagaccagcccagagtatggtcagggcatg
aatcccatcagccgcctggcccagatccagcaggccaagaaggagaaggagccggagtac
agcatggtgaccgagagaggtctaccacggcgcagagagtttgtcatgcaggtgaccgtg
tgtggccagtctgccgagggactgggaccgagcaagaaggtggcaaagaggaacgcagcc
gagaaaatgctggacctcttgggatacaaagtgcctcagcctcagcccccaaaaccggca
ctaaaaactgacgagaagaccccagtgaaaaaacctggtgatgggcgtaaagtgaccttc
tttgaacctggctccgtagaggacatggcactgatttctaaggaggaggactaccggctg
ccttacctgagccaccagcagctgcctgcaggtatccttcccatggtacctgaggtggct
caagcagtcggggcctgccaaggatcccaggtcaatcgacctttgcccaacccaggcaaa
gccacaatcactgccatgattgccaatgagctgctttatgcaggggcatctctgactgct
gagactatcctaaagaacaaaaataacctgaaccaactgccccacggacctctcaccagg
ccttcagaacagctcggctatcttgcatctgtgcaggccctgcaggtggaatacaaagat
ttccccaaaaacaataagaacgagtttgtgtcactgattaactgctcatcccagccaccg
ctcatcagtcatgggattgggaaagatgtagaatcctgtcatgatatggctgcactgaat
atactgaagttgcttgcagagttggaccagcagtcaaatgaaagaacaggaaatggacca
gtctctgggtgtggcaagcaggaaatggaaggtgacatgcacctcaaacaggctaactca
agcacattggcacagaccctggatggcactgtttaa
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