Paralichthys olivaceus (Japanese flounder): 109638953
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Entry
109638953 CDS
T06037
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109638953 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109638953 (cnot2)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109638953 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109638953 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
109638953
NCBI-ProteinID:
XP_019957716
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MFGARKKFVEFVEVVDNDFSDESMYYNQPSMFPHRSDKDMLSSPSPSSSGQLSQLGASLY
GPQSALGFSVRGMGNSTPQLNRNLTQGTQLTSHITPTTGVSTMSLHTPPSPSRGTLPMNT
RNMLNHSQVSQSIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGM
NRNQGFGMNNSLSSNIFNGTDGSENLTGLDLSDFPALADRSRREGTGNPTPVLNPLAGRA
PYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTSKSTSNADGPK
FPGDKTASAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLA
LGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLA
RYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNNYERG
TYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaaatttgtcgagttcgtcgaggttgtcgataacgacttctct
gatgaaagcatgtactacaatcagccgtcgatgttcccacatcgatcggacaaagatatg
ctctcctctccctcaccatcgtcgtcaggtcagctgtcgcagctcggtgcaagtttgtat
ggtccacaaagtgcactgggcttttcagtcaggggcatggggaacagcacacctcagtta
aaccgaaatctaacgcaaggcacgcagctaacaagtcatatcactcccacaacaggagtc
tccaccatgtccctccatacccctccgtcaccaagcagggggacgttgccaatgaacacg
aggaacatgctgaaccactctcaggtcagtcaaagcattgggatgagcggcaggaccaat
agtatgggcagctcggggctgggcagccccaaccgcagctcacccagtatcatctgtatg
cccaaacagcagccagcacgtcagcccttcaccataaacagtatgtcaggattcggtatg
aaccgcaaccagggttttgggatgaacaactcgttatcaagcaacatcttcaatggcaca
gatgggagtgaaaatctaacgggactggatctgtcagacttccctgcgttagcagacagg
agtcgaagagaagggactggaaacccaacaccggtgctcaaccctctggctggaagggct
ccctatgttggcatggtgacaaagccatcaacagaacagacacaggatttctccatccat
aacgaggacttccctgcactgcctggcccaaactacaaggaccccacgttgaacaatgac
gacagcaaaactaacttgaactctacaagcaagagcacatccaatgcagacgggcccaag
ttccccggagacaagacggcctcagcacagaacaacaaccagaagaaagggatccaggtg
ttgcccgatggtcgggtgacgaacattccctcaggaatggtgacggaccaattcggcatg
atcggcctgctgacgtttatccgggcggcagagactgatcctgggatggtccatctggcg
ctggggagcgacctcacgacactgggactcaacttaaactcaccagaaaacttgtacccc
aagttcgcctcgccgtgggcctcagcaccttgtcgacctcaagacatcgacttccacgtt
ccctctgagtatttaaccaatatccacatcagggacaagttggctgcaatcaaactggct
cgatatggtgaagacctgttgttctacctgtactacatgaacggtggagacctgctacag
cttttggcggcagtagagctctttaaccgtgactggaggtaccacaaagaagagcgggtt
tggataacaagggcgcctggcatggagcctacactgaagaccaacaactatgagaggggc
acctactacttttttgattgtcttaactggaggaaagtagccaaggagtttcatctggag
tacgacaagctggaagagaggcctcacgtgccaacaacgttcaactacaacccagcccag
caggccttctaa
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