Paralichthys olivaceus (Japanese flounder): 109639529
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Entry
109639529 CDS
T06037
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pov01001
]
109639529 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pov04054
]
109639529 (ciita)
Enzymes [BR:
pov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109639529 (ciita)
Protein kinases [BR:
pov01001
]
Serine/threonine kinases: Other
TAF1 family
109639529 (ciita)
Pattern recognition receptors [BR:
pov04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109639529 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
AAA_16
LRR_14
nSTAND3
AAA_22
NB-ARC
AAA
nSTAND_NTPase5
NLRC4_HD2
DUF6274
TsaE
Motif
Other DBs
NCBI-GeneID:
109639529
NCBI-ProteinID:
XP_019958599
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MHEADQDPFDFGDLPDDLSEFLNDDYLFDTDVFFGDPWFNSDELSNSNDIAVPPEPPCTG
GHQQQQGQTDKFSSKENKRRKRQRVPWSQQCTDENNTPSRTKRHRAAGTGVEAELSPAET
VNLPTTLTRFLQLQPPIHLITIPDPKGYHVIQNVRLSPPVIRLRLPSAAATPTYILVPES
QVQPLSPVDAAVVPVQMSSSPPGSLSDTASKAMSPPRTPISSRKPSPSKESPSPRSPTVI
DIPESVKDYIQKVKAHMSLTCPAIEEGVGLTSHYVDMQVSQRETHRSGKNPNRSLDKELI
ITGDTDRQNSLLGPRQIFEDSNGHNPRRYILLFGNAGMGKTTLIRKLCLDWSRDCIPQFD
FVFLLDGKTPALKKSIYSLQTLLLNLSSFATSCTNPEEVYAQILAASKRVLIIFDGFNEL
REYEVLLQTQEKDVMTSLQKDSKAETYTVKQLFSAILQRVLLPGCTLLLTTRPKGPANQL
LRRADSFLEVCGFTPTDVEAYLSQYFTDPALRASALDCLKRCSYLHLLCWNPGLCRLVCL
VLENSKTLDVLPRTLTGLCHQVLRLKMEKHSQGTDSQPDAKTQTSLKSEEETPTQISGNN
QLNMCHKKIPVHKSKARFHTRSSNQRARGAKKHLTKDGEEMESMRRKEDRTDERVLLSQL
SSLAWEGIKVNSSILPTERPLPFKLKAFGLGMGLLLCHPLRRRLGGGREDEKEMEGGEKQ
DGTKDRGRTDIENVDGSDDHIVLWASPFLQSYLAGVHLSLSRSVTERTFLLTLPFQSGPK
GRRRAQGEEFQLTQRFAVGLLFHNSAELQSLHSYTAASFRDMVVNKQAQVTKHLEGLSHG
DLSPAQVLEACHYVYEASFTSFGDGGRGSGSTRLDSHLAANLPDVLSFHGLRLNPPDVFA
VQNILERGGSFCLDLGDSGIGVSGLKVLVGLNNVNSFRACIDDVITLWEQLERSGEEGLL
RGAVSKFKIHPLKVTQVCHVEHLAQLVDIHVQKRLSSSSTDSDSILADGVPAVKELHKLE
FELGPDKGPLGLSKLWELLPALPNLQHLHLENSKIGDKGSERLAEALESLCSLEILNLSQ
NCIGDHGVKKLTTTLEYLPNLRCLSLYSNMISDEGAESLAAVLPHMASLTDLDVKYNKLS
DVGAQRLGASLRNCQKMKTLRMWNQWIPYGVFERLQQQDGRILWH
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagcagatcaggacccatttgactttggagatctaccagatgatttatcagaa
ttcctgaatgacgattacctattcgacacagatgttttctttggtgatccgtggtttaat
tctgatgaactcagcaactccaatgatattgctgtgccaccagagccgccctgcacaggc
ggccaccagcagcagcaggggcagacggacaaattctccagcaaagaaaacaaaaggaga
aaaagacagagagttccttggtcacagcaatgcactgatgagaacaacacaccatccaga
acaaaaagacacagagcagcaggcactggtgtggaagcagagctcagtcctgcagagaca
gtgaacttacccaccactctgacaagattcctccaactccaaccccccattcatctcatc
accatcccagaccctaaaggatatcatgtcattcagaatgtgaggctctctcctccggtc
attagacttcgactccccagtgcagctgctacacccacatacatattagttcctgagagc
caagtgcagccgctctccccggtggatgctgcagtagtgccagtccaaatgagctcgtcg
ccaccaggatctctgtcggacaccgctagcaaagcaatgtctccccctcgtaccccaatc
tcctccagaaagccgtccccatctaaagaatcaccatctcctcggtctcccaccgtcatt
gatattccagaaagtgtaaaagactacattcagaaagtcaaagcccacatgagtctaaca
tgcccggctatagaggagggcgttggtctgacctctcattatgtggatatgcaagtgagc
cagagagagactcatcgatctggaaagaacccaaacagaagcctggacaaggagctgatc
atcacgggagatacagatcgacaaaacagcttgttggggcctcgtcagatctttgaagac
tcaaatggacataaccccagacgatacatattgctgtttggcaatgcaggaatgggaaaa
accaccctgatcaggaagctgtgccttgactggtccagagactgcatcccacagtttgac
tttgtcttcttattagatggcaaaacaccggctttaaaaaagtccatctatagccttcag
acccttttattaaacctctcctcctttgcaacttcttgcacgaacccagaggaagtgtac
gctcaaatccttgcagcctcgaagcgcgtgctcatcattttcgacggttttaacgagctc
cgagaatacgaagttctactccagactcaagaaaaagacgttatgacatctctgcagaaa
gacagtaaagcggagacgtacacagtaaaacagcttttctctgccatcctccagagggta
cttcttccaggatgcacccttctgctcactacacgaccaaagggccctgccaaccagctc
cttcgtcgggcagacagctttctggaggtatgtggctttactcccactgatgtcgaagca
tatttgtcccagtacttcactgacccagccctcagagcatctgctttggactgcttaaaa
agatgcagctatctacatctcctctgctggaatcctggactatgtcggttggtgtgcttg
gttttggaaaattccaaaactttggacgtcctaccaagaactttaacagggctctgccat
caagtgcttcgtttgaaaatggaaaagcacagtcagggtacagactcacagcccgacgct
aaaacacaaacatccctgaaatctgaagaagaaactccaacacaaatctcaggtaataat
caattgaacatgtgtcacaaaaagattccagtccataagtccaaagcaagatttcatact
cgctcaagcaaccaaagagcgaggggggcaaaaaagcatttgacaaaggacggggaggag
atggaaagtatgagaaggaaggaggatagaacagacgaaagagtgttgctgtcccagctg
agctctttggcttgggaggggatcaaggtaaactcgtctatccttcccaccgagcgaccc
ttacctttcaaactcaaggcttttggccttgggatgggactcctcctctgtcaccccctg
aggaggaggctgggaggaggaagagaggacgaaaaagaaatggaaggaggagagaaacaa
gatgggacgaaagacagagggagaacagacattgaaaacgttgatggcagtgatgaccac
atcgtactgtgggccagtcccttccttcagagctacctggcaggagtccacttgtctttg
tctaggtctgtaacagagcgcacattcctcctgacccttccattccaatcaggtccaaag
gggcgtcggcgagctcaaggagaggaattccagctgactcagcgatttgcagtcggcctc
ctcttccacaacagcgcagagctgcagagcctccactcatacactgcggcatccttcagg
gatatggtggtcaacaaacaggctcaagtgacaaaacacctcgaaggtctttctcacggt
gacctgagtcccgcccaggtcctggaggcttgtcactatgtttatgaagcaagtttcaca
tcattcggtgatgggggcagaggcagtggcagcacacgattggactctcacctggcagcg
aatcttccagacgtcttgtcatttcatggacttcgactcaaccctccggatgtgttcgct
gtgcagaacatacttgaaaggggtggaagtttctgcttggatctgggggattctgggatt
ggggtttctggactgaaagttctggtggggctcaacaacgtcaactcgttcagggcgtgc
attgatgatgtcatcaccctatgggagcagctggagcgcagtggtgaggaggggctccta
cgaggggcggtgtccaagttcaagatccaccctctgaaagtcacacaggtgtgtcatgtg
gagcacctggcacagctcgtggacatacatgtgcagaagaggctgtcgagcagttccacc
gattcagattccatcttggcagacggagtaccagctgtcaaagagctacacaagctggag
tttgagcttggcccagacaaaggtcccctgggtctctctaagctgtgggagctcctgcca
gctctacctaacctccagcacttacatctcgagaacagtaagataggggacaaaggatca
gagaggttggccgaggctttagagtcactctgttctctggagatactgaatctgtcacag
aactgcatcggagaccacggggtgaagaaactgacaaccacactggagtatttaccaaac
ctgcgctgtttaagtctttacagtaacatgatttctgacgaaggggcagagagtttagca
gctgtcctcccacacatggcgtctctcactgacttggatgtgaagtacaacaagctgtcg
gacgtcggagcacagagactcggagccagtctgagaaactgtcaaaaaatgaagacttta
aggatgtggaaccagtggattccgtatggagtgtttgagcgtcttcagcagcaagacggt
cgcatcctctggcattaa
DBGET
integrated database retrieval system
