Paralichthys olivaceus (Japanese flounder): 109639553
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Entry
109639553 CDS
T06037
Symbol
dicer1
Name
(RefSeq) endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109639553 (dicer1)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109639553 (dicer1)
microRNA pathway
RISC loading complex
109639553 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
109639553
NCBI-ProteinID:
XP_019958629
UniProt:
A0A076JS40
LinkDB
All DBs
Position
Unknown
AA seq
1896 aa
AA seq
DB search
MAGLQLVTPATSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGQYQRNAKRTVFLVNTALSVVQQAAAVRTHSDLQVGEYTDLEET
SAWTDQQWRQEIIEKQVLVMTCHIFLHVLRNKILLLSKLNLVVFDDCHLAITDHPYCEIM
KLFEGCSCSPRILGLTASLLNGKCDPSELEQKIQNLERILKSNAETATDLVVLDRYSSQP
REVVLDCGPYVDKSGLSSHLLVELDEALHFLNDCNISVDREDRNPTLISKQILSDCRAVL
HVLGPWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKVHALCEEHFSPASLDL
KYVTPKVLRLLEILHEYKPFERQQFESVEWYNNRNEDNYVSWSDSEDDDEDEEVESKERP
ESNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGQSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADSERTKAFEEDLATYKAIEKILRNKCSKSVEVSEFEVEQVLDDDKT
LPPYVLRSEDGGPQVTINTAIGHINRYCARLPSDPFTHLAPKCKTLEMQDGCFQSTLYLP
INSPLRVPVKGPIMSCARLAEKAVALICCEKLHKTGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPVCLRDSYAVDIYYLYVIGMVLTTPLPDELNFRRRKL
YPPEDTTRCFGILTAKPIPRIPYFPVYTRSGEVTISIELQKSGFMLTSNQLNLITRLHQY
IFSHILRLEKPALEFKPTLADSAYCVLPLNVVGDSNTLDMDFKFMEDIEKSEARTGIPTT
QYTKQNPFSFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYY
KTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQI
LVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATEAGVGAQNLPPDFRYP
NLDFGWKRSIDSKTFIACPESCGEDSMGHCKHQQTTTLDPSCLTQPNSYHFSLPEQEALT
APESEDTTCTRNLINGTAFVTHCDNSSHQDKHLYQHDNCQCSQPSFLGLPSPESIQTATS
VPVQPSHSLKKSCPPPHRPGRISDNTNKATSVCSRLTTASNTPTAPSPHHVSDSQHRVQT
GVSPKSLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRL
SYMRSKKVSNCNLYRLGRKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKCSTDKQDLEAKE
ELLVNGQSGNDYDENDEEGEEMVDEGEVMLKDEPNEGNMEDDLEYYKEHIKFIDNMLLGS
GAFAKKISLSVFPPSPTVASASSPVVESPYEWKAPKKPLHTSSTHYPSEPAASGTLAEEF
DYSSWDAMCYLDPSKAGDEDDFVVGFWNPSEENCGVELGKQSISYDLHTEQCIADKSIAD
CVEALLGCYLTSCGERAAQMFLCSLGLKVLPLERGSLTGALEQSCQTTTIDLCYGWLKIP
PRCMLAHPDAEQTLNHLISGFENFERKINYTFQNKAYLLQAFTHASYHYNTITDCYQRLE
FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPEL
FQVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSRM
SLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVV
GKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVNN
NT seq
5691 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcttacagcttgtcaccccagctacttcacccatggggcctttctttgggctg
ccatggcagcaggaggctatccatgataacatctatacacctaggaaatatcaggtagaa
cttcttgaagcagctcttgaacataatactattgtctgcttgaatactggctcagggaag
acctttattgcagtacttctaacaaaagagctctcccaccaaatccgtggccaatatcaa
agaaacgccaagaggactgtttttctggtgaacacagctttgtctgtagttcagcaagca
gctgcagtcaggactcactctgaccttcaggtgggagagtacacagatttggaggaaact
tcagcatggacagaccaacagtggagacaagagataatcgagaaacaggtgctggtcatg
acttgccacatattcctgcatgttttgaggaataaaatattactgttgtctaaactcaac
ttggtggtttttgatgattgtcacctggccattacagaccacccctactgtgagataatg
aagctgtttgaagggtgttcatgtagtcctcgtatcctgggtctgacagcttctcttcta
aatggaaaatgtgacccttcagaactggagcagaagatccagaatttggaaagaatcttg
aagagcaatgctgagactgccactgatcttgttgtccttgacagatactcatctcagcca
agagaagtggtgctggactgtggcccctatgtggacaagagtggtctttcctcccatttg
ctggtggaactggatgaagctctccactttctgaatgattgcaacatatctgttgacagg
gaggatcgcaatcctacattaatttccaaacagatcctgagtgactgccgagctgtgctg
cacgttctggggccctggtgtgcagataaggcggcaggcattatggtgcgggagctacaa
aagtatatcaaacatgagcaggaagagctcaaccgtaagttcctgctcttcactgacacc
atcctgcgcaaagtgcatgctctctgtgaggagcacttctcccctgcttcactggacctc
aagtatgtcacccccaaggtcctccgactgcttgagatcctgcacgaatacaaacccttt
gaacggcagcagtttgaaagcgtggagtggtacaacaatcggaacgaggacaactatgtg
tcctggagtgactcagaggacgacgatgaggatgaggaggtggagtctaaagagaggcct
gaatccaactttccctcacctttcaccaacatcctgtgtgggatcatctttgtggagagg
cgttacacagctgttgtcctcaaccgtcttatcaaagaggcggggaagcaggacccagag
ctggcttatatcagcagcaacttcataactggtcaaagcattggcaaaaaccagccaagg
aacaaacagatggaggtggagtttaggaaacaagaggaggttctccggaaattccgggct
catgaaaccaacctccttattgccaccagcattgtggaggaaggtgtggatattccaaag
tgtaacctggtagtgcgatttgacctgcccactgagtacaggtcctacgtccaatccaaa
ggcagagctcgagctcctgtctccaactacataatgctggctgacagtgagaggaccaaa
gctttcgaggaagatctcgctacatataaggccatagagaagatcctgaggaacaagtgt
tccaagtcagtggaggtaagtgagttcgaagtggagcaggttctggatgatgacaagacc
cttccgccatatgtgcttcgatctgaggatggaggtccccaggtcaccattaacacagcc
attggacacattaacaggtattgtgctcggctacccagtgatccattcactcacctcgca
cccaaatgtaaaactttggagatgcaggatggatgcttccagtccacactctacttaccc
atcaattcccctctgcgagtccctgttaagggtcctattatgagctgtgccagattagca
gagaaggctgttgcactaatatgctgtgagaaactccacaaaacgggtgagttggatgat
cacctgatgcctgtggggaaggagactgtcaagtatgaggaggagctggaccttcatgat
gaggaggagaccagcgtcccaggccggcctggttctaccaaaaggaggcagtgctaccct
aaagctataccagtatgtctgagggacagttatgctgtagacatatactatctatatgtg
attgggatggtccttaccacccctctcccagatgaactcaacttccgcaggaggaagctc
tacccaccggaggacaccaccaggtgctttggcatccttaccgccaaacccatacctcga
atcccatatttcccagtgtacactcgctcaggtgaagtgaccatctccattgagctgcag
aagtctggcttcatgctcacatccaaccagctcaacctcattacccgcctgcaccagtac
atcttttcccacatactccgcctggagaaacctgcactggagttcaagcccacgctagca
gactctgcttattgcgttctacctctgaatgttgttggggactccaacacgctggatatg
gattttaagttcatggaggacattgagaagtctgaggcacgcactggcattcctaccact
cagtacaccaaacagaaccccttctccttcaagttggaggactaccaggatgctgtcatc
attccaaggtatcgtaactttgaccagcctcatcgcttctatgtcgccgatgtgtacaca
gacctgacgccgcttagcaagttcccttcaccagaatatgagacgtttgctgagtactac
aaaaccaagtacaacctggacctgtccaacctaaaccagccactcctggatgttgatcat
acctcctccagactgaacctgttgaccccccggcacttgaaccagaagggcaaagccctt
ccactcagtagtgcagagaagaggaaggccaaatgggagagtctgcagaacaaacagatc
ctggttccagagctgtgtgccatccaccctatccctgcctccctgtggaggaaagcagtg
tgtctgcccagcatcctctaccgcctccactgccttctgactgctgaggagctcagagcc
cagacagccactgaagctggagtgggagcccagaacctcccccctgacttcaggtatcca
aacctggactttggctggaagagatcaatagacagcaaaacatttatcgcctgtcctgag
tcctgtggtgaggatagcatgggacactgtaagcaccaacagacaacaacccttgacccc
agttgcctaacacaacccaatagttaccacttttctctgcctgagcaggaggctcttaca
gcccctgagtctgaagacaccacctgtacccgcaacctaattaatggaactgcctttgtt
acgcactgtgacaacagcagtcaccaagacaagcacctttaccaacatgacaactgccaa
tgctcacagcctagctttcttgggctgccgagccctgaatcgatacaaacagctacctca
gttcctgtgcagccctcacacagcttgaagaagtcctgccccccgccccacagacctggg
aggatttcagacaacacaaataaagctacctcagtctgcagccgattaaccacggcttcc
aacactcccacagcaccttctcctcaccatgtctctgactcccagcacagagtccagaca
ggagtctcccccaaaagtctcgggcccaaccctggcctcatcctgcaggctttgacactg
tcaaacgcaagtgatggcttcaacctggagcggttagagatgctgggtgactccttcctt
aagcatgccattaccacatacctgttctgtacctatccagatgctcacgagggacgactc
agttacatgcgcagcaagaaggtgagcaactgtaacctgtatcgtctggggaggaagaag
gggcttccaagcaggatggtggtgtccatttttgatccccctgtaaattggctgcctcct
ggctatgtggtcaatcaagacaaatgcagcactgacaaacaggatttagaggccaaagaa
gagcttctggtcaatgggcaatctgggaatgactatgatgagaatgatgaggagggtgag
gaaatggttgacgaaggtgaggtaatgctgaaggatgaaccaaatgagggcaacatggaa
gatgatctggagtactacaaggaacacattaaattcattgataatatgttgctgggctct
ggtgcatttgcaaagaagatctctttgagtgttttccctccatctcccaccgtggcctcg
gcttcctcacccgtagtggagtctccatatgaatggaaggcccccaagaagccccttcat
acctcctcaacccactacccctctgagccggcagccagtgggaccttagccgaagagttt
gactacagttcgtgggatgccatgtgctacttggaccccagcaaggccggagacgaggat
gactttgtggtgggtttttggaatccatcagaggagaactgtggagttgagcttggcaag
cagtcaatctcctacgatctgcacacagagcagtgtatcgcagacaagagcattgctgac
tgtgtggaggctttgcttggctgctacctaaccagctgtggagaaagagctgcccagatg
ttcctctgctcattgggcctcaaggtgttaccgttggagagagggagcctcacaggagct
ctggagcaaagctgtcagacaacaacaattgacctgtgttatggctggttaaagatccca
ccccgctgcatgctggctcatccagacgcagagcaaactctaaaccacctcatatccggc
tttgaaaactttgaaagaaagatcaactatacctttcagaataaggcttacctcctgcaa
gcctttacccatgcttcttaccattacaacaccattacagattgttaccagcggcttgag
tttcttggtgatgcaattttagactacctcataacaaagcacctttatgaagacccacgg
cagcactctcctggtgtgctgactgacttgcgctcagcactcgttaacaacaccatcttt
gcctctctggctgtcaagtacgactaccacaagtacttcaaggccatctcacctgagctt
ttccaggtcattgacgactttgtgcagtttcagctggagaaaaatgagatgcaaggcatg
gactctgagctgcgacgctctgaggaagacgaggagaaggaggaggacattgaggttcct
aaggctatgggggatatctttgagtcactggctggagcaatttatatggatagcaggatg
tcattggagatggtttggcaagtgtattatccaatgatgaggccacttatagagaaattc
tctgccaatgtgccacgctctccagtgagggagctcctggagatggaaccagaaactgcc
aagttcagccctgcagagagaacatatgatggaaaggtgcgagtgacggtggaggtagtt
ggcaagggcaagtttaaaggagttggccgcagttaccggatcgccaagtcagcagcggca
agacgagctctgcgcagcctcaaagccaatcaacctcaggtcaataactga
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integrated database retrieval system
