Paralichthys olivaceus (Japanese flounder): 109639861
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Entry
109639861 CDS
T06037
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109639861 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109639861 (vps8)
Membrane trafficking [BR:
pov04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109639861 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Clathrin
zf-RING_Vps41
zf-RING_UBOX
TPR_VPS8_2
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
Beta-prop_THOC3
Beta-prop_WDR5
zf-RING_5
Beta-prop_EML_2
ANAPC4_WD40
WDR55
Beta-prop_WDR3_1st
zf-rbx1
Beta-prop_HPS5
zf-C3HC4
EIF3I
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
109639861
NCBI-ProteinID:
XP_019959101
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MSESPDARSLLSASSQLNLMEVDTIDDKEFDIPQVDTPPTLESILNELDDEEEPFVLEDT
CTLSTDNMDAHSCDTSSLASSDSGDPAHLKRKKRMVDLNTTVHGSVLRHSLLKGISAQIV
SAADKVDAGLPTAITVAGVIAVGTSHGLALVFDTNQALRLCLGTKTTGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELAFRRVMGMRTCDSRCLFSGSKGEVCCIEPLRAPPDFRDHPITHYCLLAMASLTKILV
IGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKTVNPILAFCKGDTVHFLLVKKEETG
TIHVIKQRQLHLSCDIISLSWINSRTLVLVDSHEKLHVVDRPSQEVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYAGQIVYLGTKSAHIMTLRNWRERIDCLL
KQEHFAEALTLAWSFHEGTAKAVVVQVCWENQLYDAMIYVFNRGMNDYITPMEKLFAVIG
PPLREGRSLTDEEVVMGNKLLVYISCCLAGRAYPLGDIPEDLVIQVKNQVFDFLIHLHSA
DWSEEEEVFPFIRTLLHFDTREFLNVLAMTFEDFKNDKQALEYQQRIVDILLQVMVDNPD
FTPSQVGGLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCCPDDDSRHTERQQVLLELLQV
GGVVQFNEERLLALAEKAKFYQICEFLYEKKHLYDRIIDCYLRDPLRKGEVFSYIHNLLS
MPGYSPEEKQTVKEKVLQHIQELVTLDPSKSADIVVFHLTEEVHQIISELEDDELLFKFL
SCLLEPREGHHSETDLPLERDLHERLLDLLCRFAPQQLLSFLQTSQHYRLEEAIQITERH
HHSEATAYLLERKGDVHGAFSVLLETLKEKLCLLTAESGTEAEDRRHVEDERNGDSTLTR
VKLSLNDIIALCHRSSHNLYQQQREVLWFPLLETMMASQKLVKGSNPKHTSEVLKELTMK
VLNSMSSFIPLPAIIQRILQDPVYGKGKLAEIQGLILGMLDTFNYEQTLLETTTSLLNHD
LHWSLAHLRAAVTRGLHPRQDYCNICLQQYKRRQDSAEEIIVFRCGHLYHFQCLQQKDCG
WRLASERQQRWSCYKCSSSQGGKGGSASEPNRSRSTSLAQTRVTSVHHDAGAEAHRKKVF
VEASLDLQQQQSWDQLRSLYRGPSRLSILSELSHCHSEKTGPLIPAQPGAENFQLQLSPP
PLLEE
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtccccggacgcccgcagcctgctctctgcctcctcccagctcaacctgatg
gaggtggacacgatcgatgataaggagtttgacattccccaagtggacacacctcccaca
ctggagagcatccttaatgagctggacgatgaggaggagccttttgtgttggaggacaca
tgcacgctgagcacagacaacatggatgctcattcctgtgacacatcctctctggccagt
tctgacagtggagaccctgcacatctcaaacgaaaaaagaggatggtggatctaaacacg
acagttcatgggtctgttcttcgacacagcctgctgaagggcatctcggcacaaatcgtc
tcagctgctgacaaagtggatgctggactgccaactgcaataacagtggcgggtgtgatc
gctgtggggacgtctcatggtctggccctggtttttgataccaaccaggccctgcgactc
tgtctgggcaccaagacaactggggcagagtttggagctgtctccgccctcagcatcaac
cacgattgctcacgacttctctgtgggtttgccaaaggacagattacaatgtgggatcta
gccaatgggaaacttctgagaactatcaccgatgcccaccctccagggacagctatactg
catgtgaagttcacagatgacccaactcttgcagtgtgcaatgacagtggaggatcggtg
tttgagctggccttcaggagagtaatggggatgcgcacctgtgactctcgatgtctcttc
agtggttctaaaggggaggtctgctgtattgaacctctgcgtgctcctccagacttcaga
gatcatcccatcacacactactgtctactggccatggcctctctcactaaaattctggtc
attggcctgaagccttccctgaaagtctggatgacttttccctacagcaagtctgatccg
tccagcgttcctcagctggcctggcagtttgttcccgttcagaagacagtcaacccaatc
ctggctttttgtaaaggagacaccgtccacttcctgctggttaaaaaggaggagacgggg
accatccatgtcatcaaacagagacaactccacctcagctgtgacatcatcagcctgagt
tggatcaacagtcgcacactggttctggtagacagccatgaaaagctgcacgttgtggac
agacccagtcaggaggttttggagactctggacttggagcaggtgcaactggtctataac
agccgacatttcaaatcgctggccactggagggaatgtctcccaggctctggctttagtt
ggagagaaggcctgctaccagtcagtctctagctacgcgggacagatcgtctatttgggc
actaagtccgctcacattatgaccctacgaaactggagagagcgtatagactgtctgctg
aaacaggagcattttgctgaagcgctcactttggcctggtctttccacgagggaactgct
aaagctgtggtcgttcaagtgtgttgggaaaatcagctgtatgatgcgatgatctacgtt
ttcaacagaggcatgaatgactacattacacctatggagaaactatttgcagtgattgga
ccaccacttagggaggggagaagcctaacagatgaggaagtggtgatgggaaacaaactt
ctagtgtacataagctgttgtctagcaggaagagcatatccactgggagacatccctgaa
gaccttgtgattcaagtcaagaaccaggtgtttgacttcctgatccatcttcattcagct
gattggtcagaggaggaggaggtgttcccctttattcgtacactcctccactttgacacg
cgggagttcctcaacgtcctcgccatgacatttgaagactttaagaatgacaagcaggcc
cttgagtaccagcagaggatagtggacatcttactgcaggttatggtggacaacccagac
ttcaccccctcccaggtgggcgggctcttcacctttttggcccgacagttggccaagcca
gacaacacgctttttgtgaacaggaagctctttgatcaggtcctggagttcctgtgttgc
cctgacgatgactcccgacacacagagaggcagcaggtgctcctggagctgctgcaggtc
gggggtgtggtgcagtttaatgaagaaaggttgttggcgttggcagagaaggccaagttc
taccagatttgtgaattcctttatgagaagaaacatctctatgacaggatcatcgactgc
tacctgagagacccgctaagaaagggggaggtcttcagctacatccacaatctgctgtcc
atgcctggctacagccctgaagagaaacaaacagtgaaggagaaagtgctgcaacacatc
caggagctggtgacactagaccccagcaagtcagctgacatagtggtgtttcatttgact
gaagaggtgcatcaaatcatctctgagcttgaggatgatgagctacttttcaagttcctc
agctgcctcctggagccccgggaagggcatcattcagagaccgacctgcctctggaacgt
gacctccacgagcgtctgctggacctactgtgtcgctttgcaccccagcagctcctgagc
ttcctccagacctcccagcactacagactggaggaggccatacaaataacagagaggcac
caccacagtgaagccacagcctatctgctggagaggaagggagacgttcacggagccttt
tctgtcttgttagagacactgaaggagaaactgtgtctcctcactgcggagagtggcaca
gaggcagaagacagacgacacgttgaagacgagagaaacggtgattcaacactgaccaga
gtaaagctttcactgaatgacatcatcgccttgtgtcatcgaagctcacacaacctctac
cagcaacaaagagaggttctgtggtttccacttctggagaccatgatggcttctcagaaa
ctagtgaaggggtccaatcccaaacacacctctgaagtgctgaaggagctgacgatgaag
gttctcaactctatgagcagcttcattcctttgcctgccatcatccaacgaatactgcag
gacccggtttatgggaaaggaaagcttgcagagatccaaggccttattctgggtatgctg
gacacctttaactatgaacagactttacttgaaacaaccactagtcttttgaaccatgac
ctccactggtccctggcacacctccgtgctgctgtcacaaggggactccacccacgccaa
gactactgtaacatctgcctccagcagtataagagaagacaggattcagctgaggagatc
attgtgttcagatgtggtcacctgtaccacttccagtgcctgcagcagaaggactgtggg
tggcgccttgcttcagagcggcagcagcggtggagctgctacaagtgttcctccagccaa
ggagggaagggagggtctgcctctgaaccgaacagaagccgcagcacgtccctggcacag
actcgtgttacatcagtacatcatgatgcaggagcagaagctcacaggaagaaggtgttt
gttgaggcatcattggaccttcagcagcaacagtcctgggatcagctacgctctttatac
cggggaccatccaggttgtccatcctttcagaactctcccactgccacagcgagaagacg
gggcctctgatcccggcccaaccaggagcagagaatttccaactgcagctctctcctcca
cctctgttggaggagtag
DBGET
integrated database retrieval system
