Paralichthys olivaceus (Japanese flounder): 109640003
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Entry
109640003 CDS
T06037
Name
(RefSeq) spermatogenesis-associated protein 5-like
KO
K14575
AAA family ATPase
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109640003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pov03009
]
109640003
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109640003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_16
Rad17
AAA_2
AAA_3
Mg_chelatase
AAA_7
AAA_28
AAA_14
nSTAND3
Sigma54_activ_2
RNA_helicase
NPHP3_N
AAA_33
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
109640003
NCBI-ProteinID:
XP_019959335
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
KYFSCLLPPRCVQHFVFTHSSPQHVAGLHALRRALGGSRPPSDQQLTGTVTVTLQDLQWA
MSAVKPSAMREVSIDVPKVRWSDVGGMEEVKLKLKQAVDWPLRHPEAFTRMGIQPPKGVL
LYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVREVFRKARAVAPSIVF
FDEIDALASERGSSSGSGGVGDRVLAQLLTEMDGIEQLRDVTVLAATNRPDMIDKALMRP
GRLDRIVYVPLPDAPTRQEIFSLQFRYMPVAQDVSLDDLVTRTNKYSGAEITAVCREAAL
LALQEDIKAQHIEARHFESALNAVKPRIPDSLIQSYISYQQRHSGLCFF
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
aagtatttttcgtgccttctgcctccgaggtgtgtgcagcactttgtcttcactcattcg
tcacctcagcacgttgcaggtttacatgcactcagacgagcactgggaggttcccgcccg
ccatcagaccaacagctgacggggacggtgaccgtcactctgcaggacctccagtgggcc
atgtccgctgtgaagcccagcgccatgagggaggtttctatagatgtgcccaaggtgcgc
tggtcggatgtcggtgggatggaggaggtgaagctgaaactgaagcaggccgtcgactgg
cccctgaggcaccccgaggccttcacccgcatgggcatccaaccacccaaaggagtcctg
ctctacgggcccccgggctgctccaagaccatgatcgccaaggccctagcaaatgaaagt
gggctcaactttctggcgatcaaagggccagaactactgagcaagtatgttggagagtct
gagagagccgtgagagaggtgtttcggaaggcgagggccgtcgctccctccatcgtcttc
tttgacgagatcgacgctcttgccagcgaaagaggaagctcctcgggctccggtggtgtc
ggcgaccgggtcctggctcagctcctgacagagatggacggcatcgagcagctccgagac
gtcactgtgctggccgccaccaaccggcccgacatgatcgataaggctctgatgcgtcca
ggtcgcctcgaccgaatcgtctacgtgcctcttccagacgctccgacacgacaggaaata
ttttctctccagttccgttacatgcctgtggcccaagatgtgtctctagatgacctggtc
acacggacaaataaatattctggagcggagataacagcagtatgcagagaggccgccctc
ctggccctgcaagaggacatcaaagctcagcacatcgaggccagacactttgaaagtgcc
ctgaacgctgtgaagcctcggatccccgactcgctcatccagtcgtatatcagctatcag
cagcggcacagcggcctgtgcttcttctga
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