Paralichthys olivaceus (Japanese flounder): 109640042
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Entry
109640042 CDS
T06037
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109640042 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109640042 (runx1)
Transcription factors [BR:
pov03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
109640042 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
109640042
NCBI-ProteinID:
XP_019959391
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MYLMRKGRTGSGLFDPAPGRRYTPPSTTLASGGKMAEALPLGAQEAGGGGSLMGKLRMAD
RGMVEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPDGTLVTVMAG
NDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIKI
TVDGPREPRRHRQKMDEVKPGTLAFSERLTELEQLRRTSMRVTPPHHHHHQPSANTRQAL
NSATFSSPTHTQLTADSRQMQSSPSWSYDQSYPYLGQITTPTVHTANPLSPGRSSLSDLS
SRLTGPDLTAFGDPRMTLERSFSSLPSLPDSRFSDPRVHYPPTAAAFTYTPSHNPVSNSA
LGISMATAMATTPAGRYHTYLPPPYPANTPHQAQNGHFQSTSSPYHLYYSTAAGSYQFSM
MAGGGGGSDSRSPPRILPPCTNASTGSSLLHPSLPNQNEGVGVEVESSHSSSPTNMAAAE
AVWRPY
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgatgaggaaaggccggacaggcagcggactctttgacccagcccctggccgg
cgttacactcccccctccaccactctcgcctctggggggaagatggctgaggccctgccc
ctgggggcccaggaggccggaggcgggggctctctgatgggcaaactgcgtatggcggac
cgcggcatggtggaggtgatctcagatcatccaggagagctggtgaagacggacagcccc
aacttcctctgctccgtgctgccgacacactggaggtgtaacaagactctgcccatcgct
ttcaaggtggttgccctgggcgacatccctgatggcaccttggtaacggtgatggcagga
aacgacgagaactactcagcagagctccgcaacgccacggctgccatcaagaaccaagtg
gctcggttcaacgacctgcgttttgtcggccgcagcggaagagggaagagcttcactctg
accatcacagtgttcactaaccctcctcaagtggccacataccaaagagctattaaaatt
acagtggacggtccgagagagccgcgacgtcatcgtcagaagatggacgaggtcaaaccc
ggcacactggcgttctctgagaggctaactgagctggagcagctgaggcggacctcgatg
agggtgacgcctcctcaccatcatcaccatcagccctccgccaacacacgccaagcactc
aactcggccacattctccagtcccacgcacacgcagttaactgctgattccagacagatg
cagtcgtctccatcttggtcctacgaccagtcttatccctaccttggccaaataaccaca
cccactgtccatacagccaaccccctatcgcctggccgctcttcactcagcgacctgtcc
tcacgactcacaggccctgacctcacagcctttggcgaccccaggatgaccttggaacga
tctttctcttcccttccctccttgcctgactcccgcttctccgacccccgcgtacactac
cctcccacagcggctgccttcacctacaccccctcccacaaccctgtctccaacagcgcc
cttggcatcagcatggcgacagccatggcgaccaccccggcagggaggtaccacacctac
ctgcctccgccctatcctgcaaacactccgcaccaggctcagaatgggcatttccaatcc
acctcctcaccgtaccacctgtactactccaccgccgctggatcgtaccagttctccatg
atggccggaggaggaggcggcagcgactcgcgctcccctccgaggatcctgccaccatgc
accaacgcctccacaggctcctccctcctgcacccatccttgcccaatcagaatgaagga
gtgggcgtcgaggtggagtccagccatagtagctctccgacaaacatggcggctgctgaa
gctgtgtggagaccgtactga
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