Paralichthys olivaceus (Japanese flounder): 109640140
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Entry
109640140 CDS
T06037
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04137
Mitophagy - animal
pov04140
Autophagy - animal
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109640140
04137 Mitophagy - animal
109640140
04148 Efferocytosis
109640140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pov03000
]
109640140
Transcription factors [BR:
pov03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109640140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
bHLH_HIF1A
PAS_3
PAS
HIF-1
PAS_4
PAS_9
DsbC_N
PAS_2
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
109640140
NCBI-ProteinID:
XP_019959544
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
SVLLFRPVPLSSSCRGSTEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVSTHLDKA
AIMRVALSFLRMHHLLRPSENQKEESEEEESDIREEEEEEEEDPMDAFYPQTLAGFIMVM
TEEGDVIYLTENISKHIGITQLELLGQSVYDLVHPCDQEELRDLLSLRPSSSKKEQKHQN
ERNFFLRMKSTLTSRGRTVNIKSATWKVLHCTGHMRPFGGSSTSPPAARVMTLLCEPIPH
PSSVEFPLDRSTFLTRHSMDLRFTHCEGRVTELVGYQPEDLIGRSAYEFHHAFDSDHVTK
SLHTLLTKGQVSTSHYRFLANSGGFVWVETQATVLYSSKTSQPEAIVCLNFILSSVEQPD
VVFSSEQIRCVHQPKAEPDSPQLTPEDCGSPDVCDTDVPNQTNSSETEDTGSNPSSATEL
FFRLQEKPEGLFQTADDDTDAIAPLTGGFVELSFVTPPRPDSVPDHPQDLCTPQLRQLLT
PIFNPLTPPSSSSPASSSDPREDDVMDSSEVERFFAIWPENVQQKEKTVENMEGMDLDML
APYISMDDDFQLTAFSSLSEEVDKPSSEPSAVTPAATLSRKRAHNPDEELLSQLMIQDKR
QKQTPSSTEEELFLTHRLLDCLGEPDQSDLILDLGPGGRSQLLTDRDPVLGGVQGLCETA
ALMRDIFDPRPPDLLPPLSPLT
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
tctgttttattatttcgtcctgtccctctgtcctcctcctgcagaggcagcacggagcag
aggaagctgcgttctcgtgacgcagccagatgtcgacgcagtcaggagacggaggtgttc
tatgagctcgcccgcactctgccgctcccccgcagggtgtccacccacctggacaaagcg
gccatcatgagagtcgccctcagcttcctgcgcatgcaccacctcctgcggccgagtgag
aatcagaaagaggagtctgaagaggaagagagtgacatcagggaggaggaggaggaggaa
gaggaggatccaatggacgctttctatcctcagacgttggctggtttcatcatggtgatg
acggaggaaggtgacgtgatctacctgacggagaacatcagcaaacacatcggcatcaca
cagctggagctgctgggtcagagcgtctacgacttagttcatccgtgtgatcaggaggag
ctcagagatctgttgagtctacgtccaagttcgagtaagaaagaacagaaacatcagaac
gagagaaacttcttcctgcgaatgaaaagcacactgaccagcagggggcgcacagtcaac
atcaagtctgctacatggaaggttcttcactgcaccggtcacatgcgtcccttcggtggc
agctccacgtcgccccctgcagccagagtgatgaccctgctgtgtgagcccatccctcac
ccgtccagcgtggagttccctctggacaggtccaccttcctcacccgccacagcatggac
ctgcgcttcactcactgcgagggcagggttacagagttggtgggataccaacctgaagat
ctgattggccgttcagcctacgagttccatcacgcgttcgactccgatcacgtgaccaaa
agcctgcacacattgttgaccaaaggtcaggtcagcaccagtcactaccgtttcctggca
aacagcggcggcttcgtctgggtcgagactcaggcgactgttctctacagcagcaagacg
tcgcagcccgaagccatcgtctgcctcaacttcatcctcagttctgtggagcagccagac
gtcgttttctcttctgagcagatccgttgcgttcaccagcccaaagctgaacccgactca
ccgcagctcacaccagaggattgtgggtcacctgacgtctgtgacactgatgttccaaat
caaaccaactccagtgagactgaggacacaggttcgaatcccagcagcgctacagagctg
ttcttcagactgcaggagaagccagaggggcttttccagacggctgatgacgacacggac
gccatcgcaccactgacaggaggttttgtggagctgtcgttcgtcactccgcccagaccg
gactcggtgcccgaccaccctcaggatctgtgcacgccacagctgcgacaactcctcacc
cccatcttcaaccctctcacacctccctcgtcatcatcgccagcctcttcatctgatccc
agggaggacgacgtgatggactcaagcgaggtggagaggttctttgccatttggccagaa
aatgttcaacagaaagaaaagacagtggagaacatggaggggatggatctggacatgttg
gctccgtacatctcgatggacgatgacttccagctgaccgccttcagtagtttgtccgag
gaagtcgacaaaccttcgtcggaaccttcagctgtgactcctgcagccacactcagcagg
aaacgggcccacaatccagacgaggagcttctgtctcagctgatgattcaggacaagaga
cagaaacaaactccttcgtcaacagaagaggaacttttcctcactcacagattactggac
tgtctgggggaacccgaccagtcagatctgatcttagacctgggaccaggaggtcggagt
cagctcctcacagacagagaccccgttttaggaggcgttcaggggctttgtgaaactgca
gctctgatgagggacatattcgatcctcgccctcctgacctgttgccacctctgtcgccc
ttgacttga
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