Paralichthys olivaceus (Japanese flounder): 109640375
Help
Entry
109640375 CDS
T06037
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8-like isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109640375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109640375
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109640375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
109640375
NCBI-ProteinID:
XP_019959906
LinkDB
All DBs
Position
Unknown
AA seq
2564 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQGSTDPVEEALKLALGQVDPPTEPESTPELTVST
DLSVPVAAPSMPDPTPIQVLAQQSMPGATAQTVSIAVAPTVAPAPADTVPQIQTQTNIPI
ANTSMASSSTVLLSSPLTVSSSQATTTATTQQLTQITHQLTPQQLAAITQQAGGKIVILK
GPQGQAQVLQTVSGATGQTSGKVIRVLSGTPLKPGMSILQGGTVLNQASPGQAQVKVGAG
VQRLLQLPNGPVKHLLLTSMPQQVQQTQGQQVQVQIPAQAQMAQGQTQVQVQTQGQVQLQ
PAMQAQTQGGEPKRITLVLQQSSQAGSAAGVGQTITAQQQVAQVQTAQGGQQQQAQVPTR
LVLGQLPGGKLVLQGSQLAALTQARAGGQAGGQPKVLTIQLQVQQQPNQQGGVKYQLVSG
AGNTGSPQVLQISQGQGGQRVAVPLKMLLQPQTSSASSGGGTVSVMKVINTSTAGPSTTT
TTSSQAIRITKASGEPASVRRVEILCKQEKANRIVAEAIARAKARGEKNLPRVLNQDELP
STQSSPEIGGTVTVVSSAKKKSSGGGSKKKSPVAGGATHKTAGGGDKKSKIKTPGTTGVA
GGTVIPGAGNKSKSKTKTNTITLVGAKKRKRNASSDHSDGELSPASPAALDDDLIMKRRS
NRVVKRKKYTEDLDIKITDDEDEQEDVDVTTTAAAVSSISGNTAAQLKQEMELDGDGQPS
MQFFVENPSEEDAAIVDKILSIRLTKKEVCPGQYTNVEEFFVKYKNYSYLHCEWASLEQL
EKDKRIHQKLKRFKTKHAQMRHIFQEEEEPFNPDYMEVDRILDVSHSVDKDNGEPVIYYL
VKWCSLPYEDATWELKEDVDEGKVEEFGKIQNRQPRLKRTTRPQAGSWKKLEETREYKNG
NILREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEIYAAGIQGPFLVIAPL
STITNWEREFTTWTQMNAIVYHGSLASRQMIQQYEMYCKDDKEHLIPGAYKFDALITTFE
MVLSDCPELREISWRCVIIDEAHRLKNRNCKLLDSLKMLDLEHKVLLTGTPLQNTVEELF
SLLHFLEPAQFPSETEFLRDFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETI
IEVELTDVQKKYYRAILERNFSFLSLGANSNSNVPNLLNTMMELRKCCNHPYLINGAEEK
IVAELREVYNPMAPDFHLQALIRSAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILED
YLINKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIF
DSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMLDKASLKLGLDRAVLQSMSG
NKESNVNGIQQFSKKEIEDLLRKGAYAAIMDENDEGSRFCEEDIDQILQRRATTITIESE
GKGSTFSKASFVASENRNDIALDDPEFWQKWAKKADLDMDSINRKNTLVIDTPRVRKQTR
QFSTLRGEGGDLSDLESDDEYPAANSRHSRSSRRSDRHSGTGYGRTDCFRVEKHLLVYGW
GRWRDILSHARCKRRLSERDVETICRVILVFCLLHYRGDENIKSFIWELITPPENGREPT
TLLNHSGLSIPVPRGRKGKRVKTQSTFDVQKVEWIRKYNPDTLLLDDSYRKHLKHQCNKV
LLRVRMLYYLKQEVIGEHAESVLTGTDIREVDIWMPEMEQQEVPAGWWDTEADRSLLAGV
FKHGYEMYTTMRADPCLCFLERAGRPDDKAIDAEQHTGDTELGDDAEYDKYSEDPEFKPA
SRHKDMFEEPDSMNVDDEISVEDKVVPVVTESFLSPNWPSSSSLTARLRRLITAFQRSYR
QEQLKIEAVAKGDRRRRRCEQASKLKEIARQERQQRWTRREECDFYRVVSTFGVEKVKRE
PDLPEVGQPEFDWARFRTFARLDKKTDESLSRYFRSFVAMCRRVCHLRPSHGEDPSEVSQ
TVAPITEERASRTLYRISLLRRLRERVLPHPSLEEHLHLAPSSSELPNWWKMPDHDRQLM
LGATLHGVSRTELSIFSDSQFTFTQARDEFIQNQQAPPPLPPPPPQALPIIPLIQHKTDE
DLHGVKVEGADEDARLLCAEIGTDLQSTPLSHHDGKVRGEGWSFKKSRPRGSRSERKGEG
GSDSDSDSDSGSSSSERSGSSDDSGESEEEVERAGKVCDVDEDNSLLSMTTSQDGLPPPD
PLRVDWPKDRVLINRLDNLCTLVLTGQWPSGRRYVPEAQLNPSSELVGDEMAYTRVIRKP
SSMPGDPGAEGEDGEFTVKLLKEEGLKLTFSKQALMPNGSGGESSSRKRRKDQEFSDPDG
LLDPLERTPRRRDPPPWLKENPDYEVEGDMMELLVNKSKRRRRRRADKALTGSEKVKLIN
MRTGKKVGAAFCPMLQDLREYLEENPDIAVAPEWSETVQKSGFLPETYFHRLLTEHSEIP
KKSRRRHHHHHHHHHHHHTPEPVPEDPNLDGVEEETLVSDGAYMMDEGDLETTHHFLTSA
DFDVKMVGGDSISQGDYDSSDQEALLDDVIIAQKDSDSSSSSED
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcccatcatggacctctttgaggacactcccttgtttaacttggatgcccta
ccggacgactcattctctcagggctccacagaccctgtggaggaggccctcaagctggcg
ttgggccaggtggacccgccgactgagccggagtctactcctgagctcacggtcagcaca
gacctcagcgttcctgtagcagctccctccatgcctgaccctacccctattcaagtcctt
gcacagcagtcaatgcccggggcaactgctcagactgtttccatagctgtggctcctacc
gtggcccctgcccccgctgacactgtacctcagatccaaacccagactaacatacccatt
gccaacaccagcatggcatccagtagtactgtccttctgagctctcctctgactgtttcc
agctcccaggccacaaccactgccacaacacagcagctcacacagataacacaccagctc
actccccagcagttagctgccatcacacagcaggccggtggtaaaattgttattctcaaa
ggaccacagggtcaagcccaggtgctgcagactgtatcaggtgccacgggtcagaccagt
ggtaaggttattcgtgtgttgtctggaactcctctcaaacctggcatgtccatactccag
gggggaacggtcttgaatcaggcaagcccaggacaagctcaagtcaaggtgggtgctggg
gtgcagaggttgctacagttgcccaacgggccagtgaaacatttgctgctcacttccatg
ccccagcaggtgcagcagacgcaaggccagcaggttcaagtgcagatcccagcccaagca
cagatggctcaaggccagactcaagtccaagttcagactcagggccaggtgcagctccag
ccagccatgcaggcccaaacgcagggaggtgaaccaaaacggatcacattggttctccag
cagtcttcccaggctggctctgctgcaggagtgggtcaaaccatcacagcccagcagcag
gttgcacaggttcaaacagctcaaggtgggcaacagcagcaggcccaggtcccaacaaga
ttagttttgggtcagctccctggaggcaaactggtactccagggaagccagctagctgcc
ctgacccaggctcgagctggaggtcaggcgggagggcagcccaaagtccttacaattcag
ctgcaggtgcagcagcagcccaaccaacaaggaggagttaagtaccagctggtttcagga
gcaggaaatactggtagcccacaggtgttgcagatctcacagggccaaggaggtcaaaga
gttgcagtgccactcaaaatgcttctgcagccacagacgagctcagcatcctcgggtggc
ggcacagtctctgtgatgaaggtcatcaacacctcgactgcaggtccctccactaccacc
accacttcatcccaggccatccgtatcaccaaggcctccggcgagcctgcctccgtccgc
cgagtagaaatcctatgtaagcaggagaaggcaaaccgtattgtggccgaagctatagcc
cgggccaaagcacgcggcgagaagaacctgcctagagtcctgaaccaggacgagctccca
tcaacccagtcatctcctgagatcgggggcactgttactgtggtgtcttctgctaagaaa
aagagcagtggaggagggagcaagaagaaaagtcctgtcgctggaggagcaacacacaaa
actgcaggtggaggcgacaaaaagagcaaaataaagacaccaggaacaactggagtggct
ggaggcacagtgatacctggggctggcaacaagagtaaaagcaagactaagactaatact
ataactctggtgggagcaaagaaaagaaagagaaacgcttcctcagatcattctgatggg
gagttgagtcctgcctcacctgctgcactggatgatgacttgattatgaagaggcgctcc
aatcgcgtggtgaaaaggaagaagtacacagaagacctggatatcaagataacagacgac
gaggatgagcaggaagacgtagatgttacgacaactgcagcggctgtgtcctctatcagt
ggcaacactgcagcgcagctgaaacaggaaatggagctggatggtgatggacagcccagc
atgcagttctttgtggaaaacccaagtgaagaagatgctgctattgtcgacaaaattttg
tccatcagattaaccaaaaaagaagtgtgtccaggccagtacacaaatgtggaggaattc
tttgtaaaatacaagaactattcatacttacactgtgagtgggccagtttggagcagcta
gagaaagataagaggatccatcaaaagctcaagaggttcaagacaaaacatgcacaaatg
aggcacatcttccaggaggaggaagagccttttaaccctgactacatggaggtggacagg
atcctggatgtgtctcatagtgtggacaaggacaacggcgagcctgttatctactacctg
gtgaagtggtgctcgctgccttatgaagatgccacttgggagctgaaggaagacgtggac
gagggcaaggtggaagagttcgggaaaatccaaaaccgacaacctcgcctgaaaagaacg
acacgacctcaagctggttcatggaagaagctggaagaaaccagagagtacaagaacggc
aacatactcagagagtatcaactggaaggagtcaactggctgctcttcaactggtacaac
aggcagaactgtatcctggcagatgagatgggtctggggaaaactatccagtctattgca
ctgctctcagaaatttatgctgctggaatccaaggccccttccttgttattgctccactc
tccactatcactaactgggagagggagttcaccacgtggacacagatgaacgccattgtt
taccacggcagcctggccagccgacagatgatccagcagtatgagatgtactgcaaggat
gacaaggagcatttgattccaggtgcatataagtttgatgccctcatcacaacctttgag
atggtgttgtctgactgtccggagctgagggaaatctcctggcgctgtgtcatcatcgac
gaggctcatcgcctcaagaatcgcaactgtaagctgttggacagcttgaagatgctggat
ctggaacacaaagtgttgttgactggcactcctcttcagaatactgtggaggaacttttt
agtctgctgcatttcctggagcctgctcagttcccctctgagacagaattcctcagagac
tttggagacttgaaaacagaagaacaggttcaaaagctgcaggccatcttgaaacccatg
atgttaagaaggctgaaggaagatgttgagaagaacttggcacccaaacaggagaccatc
atagaggttgagttgactgacgtccagaagaaatactacagagccatcttggagcggaac
ttcagtttcctcagtttaggggcaaacagtaacagcaacgtccccaacctgctcaacact
atgatggagctgcgcaagtgctgcaaccacccctacctcatcaatggcgcagaagagaag
atcgtggcagagttgcgggaggtgtataacccaatggcacctgacttccatctgcaggcc
ctgattcggtcggccggtaagctggtgctactggacaagctgctgcctcgcctcaaggct
gggggccacaaagtgctcatcttctcccagatggtgcgctgcttagacattctggaggac
tacctcatcaacaagagatacctttatgagcgaattgatggcagagtgcgtgggaactta
cgacaagctgccatcgatcgctttagtaagcctgactcagaccgcttcgttttcctgctg
tgtacccgtgctggtggcctgggtatcaacctgactgctgccgacacatgtgttatattt
gactctgactggaaccctcaaaatgacctccaggcccaagcacgatgtcatcgtattggc
cagtctaaggcagttaaggtgtaccgtctgataactaggaactcctatgagagggagatg
ctggataaagcaagtctgaagcttgggctggaccgtgccgtcctgcagagcatgagtggc
aacaaggaaagcaacgtcaacgggatccagcagttctctaagaaggagatagaggacctt
ctcagaaaaggagcatacgctgctatcatggatgagaatgatgagggtagtcgcttttgt
gaggaggacatcgaccagatccttcagcgacgagcaaccacaatcaccatcgagagtgag
ggcaagggctccacattctccaaggccagctttgtggcctctgagaaccgcaacgacatt
gcccttgatgaccctgaattctggcagaagtgggcaaagaaagcagacctagacatggat
tccatcaaccggaagaacacccttgtgatcgacactcccagagtacgcaagcagacccga
cagttttccaccttacgaggtgaaggtggtgacctatctgacttggaaagtgatgatgag
tatcctgctgccaattccagacattctcgttcctcccgacgctccgaccgccacagtgga
accggatacggccgcactgactgtttccgagtggagaagcacctgcttgtctatggttgg
ggtcgttggagggacattctgtctcatgcccgatgtaagcggcgtttgagtgaacgtgat
gtggagacgatatgccgtgtcatcctggtcttttgtctgcttcactaccgtggagatgag
aacatcaagagtttcatctgggagctcatcacaccgccagaaaacgggcgtgaacccaca
acactgctcaaccactctggtctgtctatccctgtccccagaggcaggaagggtaagagg
gtaaagacccagagcacatttgatgttcagaaagtggagtggatccgcaagtacaaccct
gacaccctgctactggatgacagctaccgtaaacacctcaagcaccagtgcaacaaggtg
ttgctgagggtgcgtatgctctactacctgaaacaggaagtgataggtgaacatgctgag
tctgttctgacagggactgacatcagggaagttgatatctggatgcctgagatggagcag
caggaagtaccggcaggatggtgggacactgaggcagatcgctcgctgcttgctggcgta
ttcaaacatggttatgaaatgtacactaccatgcgcgctgatccctgcctctgcttcctg
gagcgagccggtcggcccgatgacaaggccattgatgccgagcagcatactggtgacaca
gagctgggagacgatgctgagtatgataaatactcggaggatccagagttcaaacctgcg
tcaaggcacaaagatatgttcgaggagcctgactctatgaacgtggacgatgagatttct
gtcgaagacaaggtggtgccggtggtcacggaaagctttctgagtcccaactggccatcc
agctcgtcgctaacagcacggttgcgccggctcatcacagctttccaacgcagctacaga
caggagcagctgaagattgaagcggtggcaaaaggcgaccgcaggcgcaggaggtgcgaa
caggccagcaagctgaaggagattgcgcggcaggagcgtcagcagaggtggacccgtaga
gaggagtgtgacttctaccgcgtcgtatcaacttttggcgtggaaaaggtgaaaagggag
ccggatcttcctgaggtcggacaacctgaatttgactgggcacgcttccgtaccttcgct
cgtctggataaaaaaactgacgagagcctcagtcgatacttccgctcttttgttgccatg
tgccggagagtttgccacctccgcccaagccatggtgaagatccatcagaggtttcccag
actgtcgcccccatcactgaggagcgtgcttcccgtaccctatatcgtatcagcctcctg
cgccgcctccgtgagcgagtcctaccccacccctcactggaggagcatctgcatctggcc
ccatccagctcggagctgcccaattggtggaaaatgccagaccacgatcgtcagctgatg
ctgggtgcaacgctgcacggcgtcagccgcactgagctctccatcttctccgactcacag
ttcaccttcactcaggcgagggatgagttcatccaaaaccagcaggccccgccgcctctg
cctccgcctccaccccaagcactgcccattattccactcatccagcacaagactgacgag
gacctgcatggcgtgaaggtggagggagctgatgaggacgcccggttgctctgcgctgaa
atcggcacagacctgcagagcacgcctttgagtcaccatgatggaaaagtgcgaggggag
ggctggagcttcaagaagagcagaccgaggggaagtcgatcagaaaggaagggagaggga
ggatctgattcagattcagattctgattcaggctcatcgtcctcggagcgatcaggaagc
agtgacgacagcggagagagtgaagaagaggtggaaagagcaggcaaggtttgtgacgta
gatgaagataatagtttactctccatgactacatctcaagatggccttccaccccctgat
cctctcagagttgactggcccaaggatcgtgttttgatcaaccggctggacaatttgtgt
acacttgtgctgacgggtcagtggccctcagggcggagatatgtgcctgaggctcagctc
aacccgagctcagagctggtgggagacgagatggcctacacgagggtgatccgtaaaccc
agcagcatgcctggtgacccgggagctgagggagaagatggagaattcactgtcaaactc
ctcaaggaggaggggctgaagctgaccttctctaagcaggctctgatgcccaacgggtca
gggggagagagcagcagccgtaagaggcgcaaggaccaagagttttccgacccagacgga
ctccttgacccactggagcgtactcctcgacgtagggaccctcccccctggctgaaggag
aacccagattatgaggtggagggagacatgatggagcttcttgtgaacaagagcaagaga
aggagaaggaggagggcagataaagccctgacaggcagtgagaaggtcaaactcattaac
atgagaactggaaagaaggttggtgctgctttctgcccaatgctgcaagatctgagggaa
tatctagaagagaatcctgatattgctgtagcacctgagtggtcggaaactgttcagaaa
tctggcttcctacctgagacctacttccaccggctgttgacggagcactcggaaattccc
aagaaaagccgacgccgccatcatcatcatcaccaccaccaccaccatcaccacactcca
gagcctgttcccgaagaccccaacctggacggagttgaagaggagactctggtctcggac
ggagcctacatgatggacgagggggacctggagaccacccatcacttcctcactagtgcg
gactttgacgttaaaatggtggggggcgacagcatttcccaaggcgactatgacagctcg
gatcaagaagcgttattagacgatgtcatcatagcacagaaggactctgactcctcatca
agctcagaggattga
DBGET
integrated database retrieval system
