Paralichthys olivaceus (Japanese flounder): 109640428
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Entry
109640428 CDS
T06037
Symbol
acin1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
pov03015
mRNA surveillance pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109640428 (acin1)
09122 Translation
03013 Nucleocytoplasmic transport
109640428 (acin1)
03015 mRNA surveillance pathway
109640428 (acin1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109640428 (acin1)
03041 Spliceosome [BR:
pov03041
]
109640428 (acin1)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109640428 (acin1)
Spliceosome [BR:
pov03041
]
Complex C
Other components
EJC/TREX
109640428 (acin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
109640428
NCBI-ProteinID:
XP_019959990
LinkDB
All DBs
Position
Unknown
AA seq
1765 aa
AA seq
DB search
MADLEDVTLDGRPLQTLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTAH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNDQEDHAEVNNSTSCP
PQAQDVTPALAEQHKPPGPSSGEGFFGEGNDEEGERNNEADMSSPPASGSVAMRVPGGEN
RPERGFASSEVAADSDDEDSDEAEEDGDDDDWDSGARRRNLREPARVPSSRERSGASCQP
QQQHIPSLLSPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPPRHSPSTSSSGSSSS
GSRSSSPEPQRSGHNERKPGPLTLLARKMESEGAFSGAGWHGGEGEGDRHDSSLPSATLF
PRGGPPEGLVSAITHTANTAGHMPFPMIPGTNQGVPGTHSTHIQVPVSVLKATATDERDR
QRGMEMEREELERQERQRQLEQEKAMELERERALALELEEKQRALERERIERQQALEREE
REKALQRERELALERERKERELVLERERQERELALERERQERELALAQEREEREQALARE
RKERELVLERERRERELLALAKEMEEREQALARERALERQKEVERQRALEEERLQKERED
REKREREEMERAMELERAKALERERQERERALEQERERALEAERRDRIEREKTLERERLE
REKALEQERIERQKALEQARLERERVLEQERVEKEKALEQERIEKEKALERERIEREKAL
ERERLEREKALELERIEREKAIQQERLERERALEQERLELERKEKERIEREKKEREREEK
ERVERKAALEKERIETERAEKERKERLEREKALEQEKLEQERALEKEMKEKERALKEERE
RTLERQRKEKEEQERALEQEKDQARMAEKERESHLPPSKRGREIGFTPLPTPPSFSTGPA
RKLSTEAGVQEDVHAQIPRSESQAAESSATMSPTPLSPQSSFKKFRFLRDSPTQPQPSST
SMVIKRPRTFSDTPQPQASPVLSPTSVVEKQQQQEGHRPSAEQEDRKVETKPEVIAGPPG
PTKKEAAKSIPEDREQADSVKAEHAAKDSTQKSKVDESKSPSSQLAQRDGRDAKKEEKQT
RRRSTSNDSSSSESDSESSSSRSSRSSASSQEETSSSFRGRKEVKPVRDSSPQHRVTVEI
HAEGSKELPKASPLKRAISGDMRNTTADGDSHIKKPFIEAAPGEETQRKRTNSEREEEKD
KQRQVKETGMESEKLPENSEETPKAFSARKISLSSNKLSPSPGSAEGEQESGAAAGRKRR
WGSSTAVTAKKPSISITTDSLKSLIPDIRPCLGQEAIVDLHPEEAVLSGVEDEERERSDQ
DLQIRRTVTQVVHLESQENGQKEVKRSRHEELEEEDLQGEKDRTMTLEEKMDTSFPGAVE
TQSPSHTSHDVEINTVTPSDTLIRRSISQQKTGVSITIDDPVRTSCQPSPPRGKVSNIVH
VCNLVRPFTLGQLKELLSRTGTLVEDSFWIDKIKSHCYVTYSCSEEAVATRAALHGVKWP
QSNPKVLSVDFCQQDELDFHKGLVTADRTGAEEQGPGSGRGRTSGLPSLLPERDQWAERE
REMERRERARAEREWDRDKVREFGKPGSEKEGGPRRSRSRERRRKERGKSKEKKTEKKEK
AAEDPPAKLLDDLFRKTKAAPCIYWLPLTDEQFIQRETARAERAKEREKRRKEQEEEEEK
KREEERKERMKAGGGTTGDRSEGEKDKDRERDRDRERGRDRERERERERENDKRRDGYRR
QGGSGAGGGSSRRSRSRSDPRERRR
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgtaacgctggacgggagaccgctccagaccctccgagtggcg
gatcttaaggcggccctggaggagagggggctctcgaaaagcggccagaagaacgctctg
atcaagagactcaagggggctctcatgctggagaatctgcagaggacttccactgctcac
attggcctgcagccaaactctcagattggtgaggaaatgagccagaacagctttatcaaa
cagtatctggctaaacaacaagagctcctgaggcagcgtctggagagggaggcacgcgag
gcatatgaaacaaatgatcaagaggaccatgcagaagttaacaatagtacctcatgtcct
cctcaagcccaggatgtcacaccagcattggctgagcagcacaagccaccaggcccctct
agtggagagggattttttggtgaaggaaatgatgaagagggtgagaggaacaacgaggcc
gacatgtccagtcctcctgcgtctggctctgtggctatgcgtgttcctggtggtgaaaac
cggccagagaggggttttgcatccagtgaggttgcagctgacagcgatgatgaggatagt
gatgaagcagaggaggacggtgacgatgatgattgggacagcggtgctcgaagaagaaat
ctcagagagccagccagagtgccctccagcagagagaggtctggagcatcctgtcaaccc
cagcagcaacacatcccttcccttttgtctccacagctccgccaaccaacacctcccccc
tccccacctccagagttatcattccccttgcctgacacccctaaacagagcccccctagt
ccagatgtagctccccctaggcactcacccagtacctccagctctggctcctctagcagt
ggcagccgcagcagcagcccagagccacagaggagtggacataatgagcgcaaaccaggc
ccattgacccttctggcacgtaaaatggagtcagaaggtgctttctcaggggcaggttgg
cacggcggtgagggggaaggtgataggcacgatagcagtttgccttcagccacattgttt
cctagaggaggacctccagagggtctggtatctgctatcactcacacagccaacactgca
ggccatatgccatttcccatgattccgggcaccaaccaaggtgtcccagggacacattct
acccatattcaagtacctgtgagtgtgcttaaagccactgcaacagacgagagggacaga
cagaggggcatggagatggaaagagaagagcttgaaagacaggaacggcagagacaactt
gagcaagaaaaagcaatggagttagagcgggaaagagctcttgcactagagcttgaggaa
aagcagagggctttggagagagagcgtattgagcgacagcaggccttagaaagagaagaa
cgagaaaaagccttacagagggagagagagcttgctcttgagcgagagagaaaggagagg
gaacttgtccttgagcgagagaggcaggagagggaacttgctctcgagcgagagaggcag
gagagggaactagctttggctcaagagagggaggaacgagagcaagccttagcacgagaa
agaaaggagagggaacttgtccttgagcgagagaggcgggagagggagctgctagctttg
gccaaagagatggaggagcgagagcaagccttagcacgagagagggccctggagcgacag
aaagaggttgaaagacagagggctctggaggaagagcgtttacagaaagaaagggaggat
agggagaagagagagagggaagaaatggagagggctatggagctagaaagagctaaggct
ttggagagggaaaggcaggagagagaaagggctcttgagcaggagagggaaagagctttg
gaggctgagagacgggacaggattgaaagagagaagactttggaaagggaaaggttagag
agggagaaagccttagagcaagagagaatagagagacagaaagcactggagcaagcgaga
ctagaaagggagagagtcctggagcaagagagggtagaaaaagagaaagctttagaacag
gagagaattgagaaagagaaggccttagagcgagagagaattgaaagagagaaagcctta
gagagggagagacttgagagagagaaagccttggagttagagagaatagaaagagaaaag
gctatacagcaagaaaggttggagagggagagagccctagagcaagagagattggagctt
gagaggaaggaaaaagagagaattgagcgagagaagaaagagagagaaagggaggaaaaa
gagagagtggagaggaaggcagctctggagaaggagaggatagagacggaaagagctgaa
aaggagaggaaagaaaggctagagagggagaaagctctagagcaagagaaactggaacag
gagcgtgccttggagaaggagatgaaggagaaagagagagccctaaaggaagagagggaa
aggactctcgaacgccaacgaaaagaaaaagaggagcaggagagggccctggaacaggag
aaagatcaagctaggatggccgaaaaggagagagagagtcacctccctccatccaaacgt
ggccgtgagattggtttcacccccctgcccactcctccctctttctccacaggaccagct
agaaaattatcgactgaggcaggagtgcaggaagatgtccatgctcaaataccgcggagt
gaaagccaggcagcagagtccagtgcaaccatgtcaccaacacctctgtcaccacagtca
tcctttaagaagttccggttcttaagggactctccaactcagccacagccttcctccact
tccatggttatcaagcggccccggaccttctctgacaccccacagccccaggcctcacct
gtcctctcccccaccagtgttgtggaaaaacaacaacagcaggaaggacaccggccctca
gctgaacaggaagatcgaaaggtggagacaaaaccagaggttatcgctggaccaccagga
cccacaaaaaaagaggctgcaaaaagcataccagaggacagagaacaggcagattcagtg
aaggctgaacatgctgccaaggattccacccaaaaatcaaaagtggatgaaagcaagagt
ccttcaagccaactagcacagcgggatggtagggatgctaagaaggaagagaaacaaaca
agacgaagatcaacgtctaatgattcctcttcctcagagtcagactctgagtcctcatca
tctcggtcctctaggtcgtctgcatcttctcaagaggaaacttcctcctccttcagaggt
agaaaggaggtgaaacctgtaagagactcctcaccacagcacagggtgactgtggagatt
catgctgagggttctaaagaactcccaaaagcctctcctctcaaaagagcaatatctgga
gacatgcgtaacacaactgctgatggagacagtcacatcaagaaaccgttcattgaagct
gcacctggagaggagacacaaagaaaaagaacaaacagtgagagagaagaggaaaaggac
aaacaaaggcaggtgaaggagactggcatggagtcagagaagcttccagagaacagcgag
gagacaccaaaggccttctcagctcgtaagatctctcttagcagcaacaaattgtcccca
agccctggcagtgcggagggtgagcaagagtcaggggctgcggccggtcgcaagaggagg
tggggttctagcacagctgtcactgccaagaagccttccatcagcatcaccacagactca
ctgaagtctctgatccccgacatccgaccatgtcttggtcaggaggcaatagtggatctg
cacccagaggaagctgtcctctctggggttgaggatgaagagagggaacgctctgaccag
gaccttcagatacgtcgcactgtcacacaggtggtgcacttggagagccaggagaatgga
cagaaagaagtgaagaggagcagacatgaggagctggaggaggaagatcttcagggagag
aaagacagaacaatgacgcttgaagagaagatggacacctcatttcctggagcagtggaa
acccaatcaccatcacataccagccatgatgtagaaatcaacactgtgacccctagtgac
accctcattcgtcgctccatcagccagcagaaaacgggcgtctccatcacaattgatgat
cccgtccgcacatcctgtcagccttcaccgcctcgtggcaaagtctccaacattgttcac
gtctgcaacctggtgcggccattcactttggggcaactgaaggagttgctcagccgaaca
ggcaccctggtggaggacagcttctggattgataaaatcaagtctcactgctatgtcact
tactcgtgctcagaggaggctgttgccacacgggcagctcttcatggagtgaaatggcct
cagagcaacccaaaagtccttagtgtggacttctgccagcaagatgagctggacttccac
aaaggcctggtgacagccgacagaactggagcagaggaacagggtcctggctctggtcgt
ggtcgaacgtcaggcctgccctctctcctccctgagcgagaccagtgggctgagcgtgag
cgtgaaatggagcgccgggagagggccagagcagagcgggagtgggatcgtgacaaggtc
agagagttcgggaaacccgggtcagagaaggagggaggtcctagaaggtcgcgctccaga
gagagaagacgtaaagagagaggaaagagcaaagagaaaaagactgaaaagaaggagaaa
gcagctgaggatcctccagcaaagctgcttgatgatctgttccgaaaaactaaagcagct
ccttgcatatactggcttccacttaccgatgaacagtttatccagcgagaaactgccaga
gcagagcgggcaaaggagcgagagaaacggaggaaggagcaagaggaggaggaggagaaa
aaaagggaagaagagcgcaaggagaggatgaaagctggaggtggcacaacaggagaccgg
agtgagggtgagaaggacaaggacagagaaagagacagagacagagaacgcggtagagac
agggagagggaaagggaaagggagagggaaaatgataaacgcagggatggctatcgaagg
caggggggcagcggggcaggtggcggcagcagccgacgctcacgcagccgtagcgacccg
cgagaaaggcggcgctaa
DBGET
integrated database retrieval system
