Paralichthys olivaceus (Japanese flounder): 109640429
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Entry
109640429 CDS
T06037
Symbol
limch1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pov04990
]
109640429 (limch1)
Domain-containing proteins not elsewhere classified [BR:
pov04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
109640429 (limch1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
Motif
Other DBs
NCBI-GeneID:
109640429
NCBI-ProteinID:
XP_019959986
LinkDB
All DBs
Position
Unknown
AA seq
1076 aa
AA seq
DB search
MASPAADIGQSHQHHPASDSAADSAFQEAQTWIEAVTGRCFGDRDFRGGLENGILLCELL
SSIKPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQETSTRPTAKGSD
CSRKLKNVLITIYWLGRAANGCTSYNGPTLDLKEFEGLLSQMRKEAEEAESPKRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVARGSSDGRGSDSESDG
PPHRKVPDIRKDDMSARRTSVSELRTAMPFNQYLPNKSNQSGYLPTPLRKKKNDKEEGAR
KSWSTATSPIGGDRPFSPDEIPSLDTPSPSSTPPLEPQTQIQREDEGEHSFSIPNIEIHA
AITRRSSDPPPCSVPQPHAEPRTETVTHLMGPSAQSTPARSCSEELFHHSTTLAGNTIAA
SVVASGPGKLSPTTHREEAGVRMGVAGTPLVADAELDAKQACRMPTSPKRTPSPSHFLPV
PAAVATTSREIANTGRRKGRALSESDDPQGSWLDGSLPATFSHTDIVSDDSQSVSMIDMR
GEDEAVLQPHSQVRHELMHNQYNTMKEEEDHWQDDLARWKNRRRSVSQDLIKKEEERKMM
EQLMTGDTCPSHRRRSIKTYREIVEEKERREEELRDTYKRARTPEEASAILQRYAQRFSI
SETILERLQLPKLLDRSISADPSFPCSPFPLSLSSSPTTPDPFDVDPNGPLRFLRQQSAP
APKFTSTLEARIEEFPKDLSSPHQRPQIRSRSSEPPSTRTLSPKPVPLLTPKPYLESRGR
AAEPWANKADGLLRVNGNVGSDDAPTTPESQGRESPPHFQASPSRTSNSAVGAPSPAASP
AHSLRASPAGGSPASIKAKEARDGSKAAPEDVRDQRVAEHSSPLSRPTSLPEELQKPEES
FWKPGDRTAAAPEEKNSKAAAQLTTRTEAKQDVKPEASGPNIATLVRSGFSSQQCQTVTS
QASFPSSQEFSQGRENVPNLTAPGSSGYHPTQEVTAEFANSVIPPLATSNPKLRWEFFAP
PGKTLSFISGARVSFPRCRMCMESPLCLQQLDDTQFLTHVRSLVDDRCFFLSILDF
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggctgcagacataggacagtctcatcagcatcaccctgccagcgactct
gccgcagactccgcgtttcaggaggcgcagacatggatcgaggctgtgacaggaagatgt
tttggtgacagagatttcagaggaggcttggagaatggcatactgctgtgcgagttgctg
agctccattaaacctggtctggtgaagaagattaacagactgccaacacccattgctggt
ctggacaacctcagtgtgtttctccgaggctgtgaggagttgggactgaaaggctctcag
ctgtttgaccctggagacctgcaggagacatcaacacgccccaccgccaagggaagtgac
tgcagccgaaagctgaagaatgttttaatcaccatctactggttgggtcgtgctgccaac
ggctgtacctcctacaacgggcccacgctggacctgaaagagtttgagggcctgctgtca
cagatgcgaaaggaggcggaggaggcagagagcccgaaacgcagcatccgcgacagtggc
tacatcgactgctgggactcagagcgcagcgactctctctcccccccacgccacggccgc
gaggactcgttcgacagcctggactccttcggctcacgctcacgtcaaaccccgtcgcca
gacgtcctggttgcccgcggcagcagcgatggccgtggaagcgactcagagtccgacggc
cccccccacaggaaggtgccggacatccgtaaggacgacatgtctgcgcggcgaacgtcc
gtcagcgagcttcgaaccgccatgccctttaaccagtaccttcccaacaagagcaaccag
agtggatatctacccacgccgctccgcaaaaagaaaaacgacaaagaggagggagcacgc
aagagttggagtactgccacttcgcctatagggggagacagacctttcagtccagatgaa
atccctagcttagacaccccgagtccatcctccaccccgccccttgaaccccagacacag
attcaacgggaggatgaaggggagcacagtttctccatccctaacattgagatccatgcg
gccatcacgaggaggagcagtgaccctccgccctgtagcgtcccccagccccacgcagag
ccccgcacggagactgtaacgcacctgatgggcccctctgcacaaagcactccagctcgc
tcgtgctcggaggaactcttccaccattcaacgactctggcgggaaacaccattgcggcg
tctgtggtcgcatcaggccccggaaaactttcacctacaacacaccgggaggaagccgga
gtgaggatgggagtcgctggtaccccgctagtcgcagatgcagagctggacgcgaagcaa
gcctgtcgaatgccgacctctcctaaacgcacgccaagtccctcccacttccttcctgta
cctgctgccgtggcaaccacttcaagagaaatagccaacacaggccgacgaaagggcagg
gccctgagcgaaagtgacgacccacaaggatcttggttggacggcagtcttccagcaaca
ttcagccacacagatattgtgtcagatgattcacagagtgtgagtatgatcgacatgcgt
ggtgaggacgaggccgtcttgcagccccacagtcaggtgcgtcatgagctgatgcacaat
cagtacaacacgatgaaggaggaggaggatcactggcaggacgacctggcaagatggaaa
aatcggaggaggagtgtttctcaggacctgatcaagaaggaggaggagaggaagatgatg
gaacagttgatgacaggagacacttgtccctcccacaggaggagaagcatcaagacgtac
agagagatagtggaggaaaaggagcgccgtgaggaggagctgcgggacacctacaaaaga
gccagaacccctgaggaggcgtccgccatcctgcagcgttacgcccagcgtttctccatc
agtgaaactatcctggaacgcctgcagctgccaaagctgctggatcgcagcatctccgct
gacccctccttcccctgctcacccttccctctctccctctcctcctccccgacgacgcca
gaccccttcgacgtggaccccaacgggcccttgaggtttctgcggcagcagtccgccccg
gctccaaagttcacgtctacgcttgaggcgcgaatcgaggagtttcccaaagacttgtcg
tcacctcaccagcggcctcaaattcgctcgcgctcgtctgagccgccgtcaaccagaacc
ctgtctcccaaaccggtgcctttgctgacacctaagccttacctggagtcccgaggcaga
gcggctgaaccgtgggccaacaaggcggacggtttgctccgagtcaacggcaatgtagga
agtgacgacgctcccaccacacctgagagtcaaggaagggaatctcctcctcacttccag
gcgtccccttccagaaccagcaacagcgctgtaggtgctccctccccggcagcatcgccc
gcccacagtctacgcgcctcccccgcaggaggaagcccggcgtccataaaggccaaggag
gcacgggacggcagcaaagcagctcccgaggacgtccgggaccagagagtcgctgagcat
tcatcgccactgagtcggcccacctcacttccagaggaactgcagaagccagaagaaagc
ttttggaagcctggggaccggacggcagctgctccagaggagaaaaactcaaaggctgca
gctcaactaacaacacgtacagaagccaaacaagacgttaaacctgaagcatctggtccg
aacatcgccactctggtccgatcagggttcagctcacagcagtgtcagacagtaacttcg
caggcgagttttcccagttcccaggagttttcacagggaagagagaacgtaccaaactta
actgcaccaggatcgtctggatatcacccgacacaggaagtaacagcagagtttgcaaac
agtgtcatccctccactggcaaccagcaaccctaagttacgttgggagttcttcgctccg
ccaggtaaaaccctttcattcatcagcggagctcgtgtttccttccccaggtgcagaatg
tgtatggagtccccgctgtgtctgcagcagttggacgacactcagtttttaactcacgtc
aggagtcttgtggatgatcgctgtttttttctctccatcttagatttctag
DBGET
integrated database retrieval system
