Paralichthys olivaceus (Japanese flounder): 109640528
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Entry
109640528 CDS
T06037
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109640528 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109640528 (sf3b3)
03041 Spliceosome [BR:
pov03041
]
109640528 (sf3b3)
03036 Chromosome and associated proteins [BR:
pov03036
]
109640528 (sf3b3)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
109640528 (sf3b3)
Spliceosome [BR:
pov03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
109640528 (sf3b3)
Complex B
109640528 (sf3b3)
Complex C
U2 SnRNP specific factors
109640528 (sf3b3)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
109640528 (sf3b3)
TFTC complex
109640528 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
109640528
NCBI-ProteinID:
XP_019960150
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNITLQRATGITHAIHGNFSGTKLQEIVVSRGKILEIIRPDANTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVIGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPTDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQCTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGSPKAGAGQWASIVRLVNPIQGTTLDQVQLEQNEAAFSVAVCRFPNTG
DDWYVLVGVARDMILNPRSVAGGFIYTYRLIGGGEKLEFVHKTPVEDVPLAIAPFQGRIL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVSSIHTIGQRVIVTDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIVNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVAEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctctacaacatcaccctgcagcgtgccactggcatcacacatgccatccatgga
aacttctcaggaaccaagctgcaggagattgttgtttccaggggaaagatcttggaaata
atacgtccagatgccaacacaggaaaggtgcacactctgctcaccgtggaggtgtttggc
atcataaggtctctgatggcattcagactcacaggaggaaccaaagattacatagtaatc
ggaagtgacagtggtcgcattgtcatcctggaatatcatccatcaaaaaacatgtttgag
aagatccaccaggaaacgttcgggaagagcggctgtcggcgtattgttcccggacagttt
ctggctgtcgacccaaaaggcagagctgttatgataggagcaatcgagaaacagaagctg
gtttacattctgaacagagatgcagcagcaaggctgaccatctcctcaccactggaggca
cataaagcaaacacactggtgtaccatgtagtcggagtcgacgttggctttgagaatccc
atgtttgcctgcttagaaatggactatgaggaagctgacaacgacccaacaggagaagct
gctgccaacacacaacagactctcaccttttacgagctggacctcggcttaaatcacgtg
gtccgcaagtacagcgaggctttggaagagcatggaaacttcctcatcaccgttcccggt
ggttcagatggacccagtggtgttctgatctgctcagaaaactacatcacttacaagaat
tttggagaccagcctgacattcgctgtcctattccacgacgcagaaatgacctggatgac
ccggagcgtggcatgatcttcgtctgctcagccacccacaagaccaagtctatgttcttc
ttcctggcccagactgagcagggagacatcttcaaggttactctggagacagatgaagaa
atggtcacggaaatcaggctgaagtactttgacacgatccccgtggcaacagccatgtgt
gttctgaagactggcttcctgtttgtttcctcagagtttggaaaccattacctttaccag
atcgctcacctgggcgatgatgatgaagaacctgagttctcatctgcgatgccactggag
gagggagacaccttcttcttccagcctcgtcccctcaaaaaccttgtgctggtggacgaa
caggagaacttatcacccatcatgtcctgtcagattgctgatttggccaatgaagataca
cctcagctgtatgtggcctgtggacgaggacccagatctactctcagggtccttcgtcac
ggactggaggtttcagagatggctgtgtccgagctgcccggtaaccccaatgctgtgtgg
acagtgcgtagacacgtggaagacgagtttgatgcctacatcattgtgtctttcgtcaac
gccactctggttctgtccatcggagagactgtggaggaggtgacagattctgggtttctg
ggaactactcccaccctgtcctgctcactgcttggtgaagatgcattggtgcaggtgtac
ccagacggcatccgccacattcgagcagacaagcgtgtgaatgagtggaagactcctggt
aaaaaaaccatcgtccgctgcgcggtgaaccagcggcaggtggttatcgccctcactgga
ggggagcttgtctactttgagatggacccgtccggccagctgaacgagtacacagagcgg
aaagagatgtccgcagacgtggtttgcatgagcctggctaacgttccacctggtgagcaa
cgctcccggttcttggcggttggactggtcgacaacacagttcgaatcatctccctggac
cctacggactgtctgcagccgttgagtatgcaggcccttccagcccagccggagagtctc
tgtattgtagagatgggaggtgtcgagaaacaagatgaacttggagaaaagggaaccatt
ggatttctctatctcaacattggacttcagaacggtgtgctactgagaactgttctggac
ccggtaactggtgacctgtcagatacacgaacacgctacctggggtctcggccagtcaaa
ctcttcagagtcaggatgcagggacaggaagctgtgctggcaatgtccagtcgctcttgg
ctcagctactcgtaccagtctcgcttccatctgacccctctgtcatacgagactctggag
tacgcctctggctttgcctccgagcaatgtccagaaggtatagtggccatctccaccaac
acactgagaattttggctttggagaagttgggagccgtcttcaatcaggtggcctttcct
ctgcagtgcactcccagaaagtttgtgatccacccagagaccaataacctcattttgatc
gagactgaccacaatgcctacacagaggcgaccaaagctcagcgaaagcaacagatggct
gaggagatggtggaggctgctggtgaggatgaaagggaactggctgctgagatggccgct
gccttcctcaacgagaatctcccagaagccatctttggttcgcctaaagctggagccggg
cagtgggcttcaatcgtgcgactggtaaaccccatacagggtacaacattggaccaagtg
cagctggaacagaacgaagctgctttcagtgtcgcagtgtgtcgcttccccaacacggga
gatgactggtatgttctggttggtgtagccagagacatgattctcaaccccagatcggtg
gccggcggctttatctacacctataggctcattggtggcggggagaagctggagtttgtg
cacaagaccccagtagaagatgtgcctttggccattgctccattccagggacgaattctg
gtgggagttggtaaactcctgaggatctatgaccttggaaaaaagaagctgctgcgcaag
tgtgaaaacaagcacgtacccaacctggtgtctagtatccacaccatcggccagcgagtg
attgtcactgacgtccaggagagtctgttctgggttcggtatcgacgtaacgagaaccag
ctcattatcttcgctgatgacacatatccccgctgggtgacgacagcctgtctacttgac
tatgacaccatggcctctgctgacaagtttgggaacatcagcatcgtgcgtcttcctccc
aacaccagcgatgatgtggatgaagaccccacaggaaacaaagctttatgggacagaggc
ctcctcaatggagcatcacagaaggctgaggtgatcgtcaactaccacgtaggtgagacg
gtgttgtctctgcagaaaaccactctgatccccggaggttccgagtccctggtctacacc
acgctgtctggaggcatcggcatattagtcccattcacctcacatgaggatcatgacttt
ttccagcatttagagatgcacatgcgctcagagttccctccactctgcggtagagaccat
ctcagctttagatcctactacttcccagttaagaatgtgatcgatggagacctgtgcgag
cagttcaacagtatggaccctcacaagcagaagagtgtggcagaggagctggacaggacc
ccaccagaggtctctaagaaactggaggatattcgcactcgttacgccttctaa
DBGET
integrated database retrieval system
