Paralichthys olivaceus (Japanese flounder): 109640534
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Entry
109640534 CDS
T06037
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109640534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109640534
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109640534
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109640534
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
FAM186A-B_N
Motif
Other DBs
NCBI-GeneID:
109640534
NCBI-ProteinID:
XP_019960156
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MERFKIVERETKTKAYSKEGLGLAQKVDPAQREKEEVGMWLTNMIDTLNMQVDQFESEVE
SLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHIRMLETILRMLDNDSVQVDSIRKIKDDV
EYYIDSSQDPDFEENEFLYDDLDLEDIPQTLVATSPPGHSHLEDEIFQHSSSTPTSTTSS
SPIPPSPATCTTENSEDDKKRGRSTDSEVSQSPVKNGNPSSSLSSSSSSSSSSSSSSSSS
SSVSGLTPSSLVSMATIAGGGGSASGGNSHYTNSGGLLSNTSAGSYSNATQQPPHPSAQQ
QPAKNSVSLSSSAPIACPSTNSHPTSSTSSPPNASTQGLLTSNSLPPPPSGPTQTSNSFG
LGLGLSLGKGGMSSSLTTSPMSGGLGLSGMPASLSTMASLLSSSTPAPYAQAAASGAVGS
GLPGLPGSLGGVSTTTTNSALGSIGSGNITVGGPTSSSGGLLGASTAMGSIGSGILGLGS
SQSGMQGLSLMSPSQVGGLAPGSGVGVIGSNGGSSGSVGSGVVGGNSSLSVRPPSRQKQN
GSTSYSAVVADSTADSALNSVSQSQNSQPSSLTSTANQPKDTGPSLLGSITLSSSSPSPG
SYSDAKMVSGGSLLNGPLSFSQSSDSIKCHSSGTLSFLKIPRSEFSCLPQKENLLIDSEN
TTLFEDNMTLKDEPQEPLSSLKSMAERAALSSGMEGDVPSLHLTPDIFPSSTTASSGPPS
APQTSLSEVSIPPSLGVCPLGPVPVSKDQLYQQAMEEAAWTHMPHPSDSERIRCSEIQIC
NHTIIRPYASPLR
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagcggttcaagatagtggaaagagaaaccaagacgaaagcctactcaaaagaaggg
ttgggcctggctcagaaggtcgacccggcccagagggagaaggaggaggtcgggatgtgg
ctaacaaatatgattgacacgttaaacatgcaggtggatcagtttgagagtgaagtggag
tctctgtcggtccagaccagaaaaaagaaaggagacaaggagaagcaggaccggatcgag
gagctgaagaagttcatcgagaagcatcgataccacatccggatgctggaaacaatactg
aggatgctggacaacgactcagtgcaggtggactccatcaggaagatcaaggatgatgtg
gagtactacatagactcgtcgcaggatccagactttgaggagaacgagtttctgtacgac
gacctggatctggaggacattcctcagacgctggtcgccacctccccgccgggacactcg
cacttggaggacgagatcttccagcactccagcagcacacccacctccaccacctcatct
tcacccatccccccctcacctgctacttgcactacggagaactcagaggatgacaagaag
agaggacgttcgacagacagtgaagttagtcagtcacctgtgaagaacggaaacccttcc
tcctcgttatcctcttcctcctcctcctcttcttcctcctcctcttcctcctcctcctct
tcctccgtctcagggctgaccccctcctcgctggtctctatggcgaccatcgccgggggt
ggaggcagcgcctctgggggcaacagtcattacaccaactcggggggtctcctctccaac
acctccgctggcagctacagcaacgccacccagcagccgccgcacccatcagcacagcaa
cagccggccaaaaactcagtgagcctctcctcctctgcaccgatagcctgccccagcacc
aacagccaccccacctcctccacctcctctccccccaacgccagcacacaggggctcctg
acttcaaactccctgcccccgcctccatcagggcccacgcagacctccaacagcttcggc
ctcggtctggggctctctctggggaaaggcggcatgtccagctccctcaccaccagcccg
atgtccgggggcctcggtttatcagggatgccggcatccctgagcaccatggcgagcctt
ctatccagctccactccagcaccgtacgctcaggcagccgcctcaggtgcggttggctcc
ggcttacctggcttaccgggctctctgggaggcgtcagcaccacgaccaccaacagcgcg
ctgggctccatcggcagtgggaacatcacagtcggcgggccgacatcttcttcaggaggt
ctgctgggcgcatcgacagcgatgggcagcatcggctctgggattctgggtttgggctcc
agccagtcggggatgcaggggctgtctctgatgtccccgagccaggtggggggcctggct
ccaggaagcggagtaggagtcatcgggagcaacggaggcagctcgggatcagtggggagc
ggagtggtgggaggaaactcgtcactctctgtcagaccgccgagccgacagaagcagaac
ggcagcactagttacagtgccgtggtggccgacagcacagcagactccgccctcaacagt
gtcagccaatcacaaaacagccaaccctcatctttgacctccacagccaatcagcctaag
gatactggtcccagtctactgggctctatcactttgtcgtccagctctccatcaccgggc
tcctacagcgatgccaaaatggtgagcggcggcagcctgctgaacgggccgctgtccttc
tcacaatcctctgatagcatcaagtgtcacagctcaggaactctgagctttctgaaaata
ccaaggtccgagttttcatgtctaccacaaaaagaaaaccttctaatcgattcggaaaac
acgaccctgtttgaagacaacatgaccctgaaagacgagccccaggagcctctgagcagc
ctgaagtccatggccgagcgagcagcactcagctcagggatggagggagacgtgccttcc
ctgcacctcaccccagacatcttccccagcagcactacagcctcctccggccccccgtca
gcgcctcagacctcgctgtcagaggtcagcatccccccgtcgttgggggtctgcccactg
gggccggtgcccgtgtccaaagaccagctctaccaacaggccatggaggaggcggcgtgg
acgcacatgccccacccgtctgactccgagaggatcaggtgcagtgaaattcaaatttgt
aaccacacgataattcgtccttacgcttccccgctgaggtag
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