Paralichthys olivaceus (Japanese flounder): 109640675
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Entry
109640675 CDS
T06037
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109640675
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109640675
09142 Cell motility
04820 Cytoskeleton in muscle cells
109640675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pov04147
]
109640675
00536 Glycosaminoglycan binding proteins [BR:
pov00536
]
109640675
Exosome [BR:
pov04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109640675
Glycosaminoglycan binding proteins [BR:
pov00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109640675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
109640675
NCBI-ProteinID:
XP_019960364
LinkDB
All DBs
Position
Unknown
AA seq
1672 aa
AA seq
DB search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NT seq
5019 nt
NT seq
+upstream
nt +downstream
nt
atggggaggccactgctcatagtccctctgatcgtgtttgctgtgatgctgctgggcacc
ggggccaaaaattgtgtgtgcggtagaaaatcaaggtgccactgtgaaggcgtgaaaggc
agcaggggagacaaaggtttaccaggagtttcaggtcccgcaggagtggatggccgtcca
ggaccaactggccatgctgggccattgggagctaagggcaacacagggtctgatggacac
atgggaccaaaaggcgatccgggacctgagggcaaagaaggatttgctgggtctcatggt
ttaccaggtatcccaggtttacaagggcctccgggacccacaggggccccaggatgcaat
ggaactgatggagatgatggacatcccggactccctggggtctacggtattgatggaaaa
ccaggtccacaaggtccgcctggacctaagggtgaatctctggcatcagcaaattcagta
ggagggccacctgggccacctgggagggatggaaaacagggagctccaggttcccgtgga
gagactggatcacctggaggccctggaccaaggggcaattttggttttcctggccgtcca
ggggctcagggatctaagggtcaagggggcacaggcgggatcccaggacctcaaggacca
aaggggagaccaggaccacctggagcaccagggtcaccaggtcggattagggagtttttg
actgaaatacagcaacagattgaggctctaaaaggagatagaggagatgtgggagaaaag
ggctgcaagggcgaaccaggagacgttagttttggcctcaaaactaaaggagaaaaggga
aacaaaggacacaagggtccagaaggacagccagggaaggatggtgatcctggtcaaggc
catcagggaaaccctggccacagaggtgagccaggatatccagggacaccaggaggaatg
ggtgaaaagggagctagaggtccacatggtccacccggatatatatatgggcctgtgcct
gagccactcaaaggatatcatggagatcctggtccccctggaccacctgggcttcctggt
cgtcagggtgttgtgggatttcctggaccagaaggacttccaggccgtgcatctggcttt
tatgtgccaggcccacatggtcctaatggctttccaggttccaaaggggaccctggggac
cctggggatatttatactggactcccaggtctagaaggagatcctggtgatgaaggtctt
cctggggatcagggcccacctggacctccagaagacagaactaacaggattaccaaaggt
gtcccgggaatgaagggaataaagggtatccctggagccccgggatataacggaactttt
ggaatgaaaggagagaaaggggagccctgttatcagtgtaccggatcaggacacccaggc
ttatcaggtccccctgggccacctggcattcctggctacaatcaaggaccaggtgccaaa
ggtgatccaggcttcccaggacctagaggtgtccctggaagaccaggcccaattggtgat
tcaggatttcaaggtcctccaggacaaaagggagagacacattcctatcacaccctgggg
ataaagggagagataggaggcccaggacagcctggaaaccctggtgcaaatggtctccct
gggactcctggattaccaggtcgcaaaggatatcaaggctctccaggggatttatatcca
ttcactggtgtagagggagaccagggttttccaggtccaccagggccttcaggcagtcca
ggaccagttggcttccctggcccagtgggatatgggcaagttggacatccaggaagtaag
ggagatattggtgtacctggcttcccaggactgcctggaaatccaggccagaaaggggaa
cctatgcatattcacaccaaaggactccctggacgacctggatttaaaggtctgcctggt
gcacctggaaacattggtcatcaaggagtgccaggtaccccaggaataccaggtacccca
ggacagaaaggagaaagtggggatctggcatttcccggaaagctggggatcccagggcca
aaaggtgaaaaagggcagccaggtctcccaggtcttccaggtatgggcttgcctggtcag
ccgggttcacaaggccctcctggtgttccaggactgaagggtgatagtggtcctggaaaa
cgtggcttccccggcctgccaggggttccgggagaacctggagtgcagggacatgtagga
gatgttgggactcctggtctacctggaaacccagggctaaatggtaaccctggttttcca
ggagaaaaaggaagtcaaggctctatagggccccctggactacctggtagcaaggagtca
tgttatggtttacctggaccagagggaccaccaggaccaaatggttatccaggactccaa
ggacctaatggttttcctggtgagaaggggaatccaggtttaccagggtcgggtcagcct
ggcccccgtggtcagcctggttcccctgggtcatcagtgacgggttcacgtggacttcct
ggacaaaaagggattaagggacaaaatggcctgtctggtaaaccaggactgagaggagac
ccaggaccagacggcttaccaggatatggactggagggattgcctggaattctaggacca
ccaggccaaataggttcccctggccaagatggagccaaaggttcccagggtccaccaggc
atggatggagaaccaggtcccacaggtcctccaggcactagatcaacaccaatagatata
attgggcccccaggagaccctggcaatattggtcattctggtcaaactggtccccatgga
aacactggaagtactggaccaaaagggcaaagagggacagaaggagcaccagggggtccg
ggaccaagaggccctccaggtgctccaggtattgatagagtagcgttctcccaaggaagt
caaggacctgctggagtcccgggagatccaggatttagagggcctccaggcctgaaagga
ataaaaggagatacaggtatcgctggagggccgggtcccaatggcgaaacaggtcaacct
ggcttcaaaggggatgatggagaaccaagctactctggatatggactgcctggaccagtt
ggacaaaagggtgaaccaggatcaagcaacagtgaagtgatgaaaggtcagagaggagaa
cctggtatcagtggacgagtaggtgtaccaggaagcccaggagccagaggaaacccagga
cctgttggagacaatggtttaccaggctatcaaggacctaaaggttcagatgggcctaca
ggaatcaaaggacacacaggaactcatggatcaccaggacagcaaggtctgcggggtgtt
gctggttatccaggtccgaaaggcaaccagggccgggatgggatccctggaccaccagga
gagaaaggggacaccataattcacgggacacctggaagacgtggtgacacaggtcaacca
ggtcccccaggaaaccctggtcctcctggcttgtctgtaacagcgagtcctgggccgaca
ggagacagaggacttcctggcatacgtggggttaatggtcctcatgggctaccaggtaga
caaggggaatgtctacctgggttaaaaggaagccgtggccatcttggatttcctggcaaa
ccaggctgtcctggtttacctggccctccaggtcccacagtagcagggttaaaaggagac
agagggaacatgggtcctgcagggatcccaggttattgtggtccacaaggagatccaggt
cttcaaggaccacctggtgcaagaggcagacctggaggcccaggaccattaggtgacttg
ggtcctcctggattccaaggccctccaggtgggatgggagaccccggatacatcccagga
ccacccgggccacctggacacaaaggttttcctggaccacctggccctaaaggtgaacct
gtatttggcaaatatacatatgaagcagggcctcctggcttacctggtccccccggaaat
cgaggagctccagggagcacaggagcatcaggaccaccaggccatcaaggccagcccgga
atcaaaggggtgcgtggttccagcccaatcggcctgcccggttttcctggctacaaagga
gacacaggaagagccggagtgccaggtctggaaggtagaaccggagacccaggccgaaag
ggtcctccagggttgcctggtagaggtttttcatgtcacactgatagtttcctaatagcg
agacacagtcagagcatccgtgtccctgactgcccttatggctccagcttcatctactct
ggatactccctcctcttcatcaacggaaatgagaaagctcatggtcaggatcttggcaca
atgggaagttgcctccctcggttctccaccatgcccttcctgttctgtgacacagagagc
aactgtcgctacgcttctcgaaatgactactcgtattggttgtccactgacactcccatg
cccaccaacatggttgccatcacaggggataaactggcctcctacatcagcaggtgctca
gtgtgtgaaaccacctccaatgttatagccatccacagccagacaactctgatacctcaa
tgtccccagggatgggagtccctgtggactggatactcatttgtcatgcaaacaggtgtt
ggggcagatggctcctcccagcctctggtttctcctggctcatgtctggaaagtttccgc
caagtgcccttcattgaatgtcacggcaagggaacatgtaactactaccctgactcctac
agctactggttggcctcccttgaccccaacaagatattcagtaaacctgttcctcggaca
gtgaagggacccactctagaaaatgttatcagccgttgtcaagtctgtaggaaaacagtg
aaggctcgcccaggtgatggacgtggggacagtttttaa
DBGET
integrated database retrieval system
