KEGG   Paralichthys olivaceus (Japanese flounder): 109640684
Entry
109640684         CDS       T06037                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov04382  Cornified envelope formation
pov04510  Focal adhesion
pov04512  ECM-receptor interaction
pov04518  Integrin signaling
pov04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pov00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109640684
   04518 Integrin signaling
    109640684
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109640684
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109640684
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109640684
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pov04147]
    109640684
   00536 Glycosaminoglycan binding proteins [BR:pov00536]
    109640684
Exosome [BR:pov04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   109640684
Glycosaminoglycan binding proteins [BR:pov00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109640684
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 109640684
NCBI-ProteinID: XP_019960375
LinkDB
Position
Unknown
AA seq 1608 aa
MGQRGREGSPGDKGRRGIEGSHGPEGPKGDRGKTGAPGFPGNDGSLGHPGAGGEPGLSGL
DGCNGTMGRPGVPGVHGLDGLHGPPGPPGPKGIKGEPLYGVTLPGLPGERGRDGEHGVPG
RRGVMGLKGHDGLSGPPGLEGLVGREGVRGPPGNPGGSLAGDKGDDGEQGPPGLPGPEEV
IEFPPGFLPHKGYKGDRGLPGPCGPKGKRGNTLDFDRQRNKGEQGIHGFPGLWGLPGIPG
IDGPKGPQGFPGEEGLPGLIGRTGPKGYPGDPGLPGPLHFHNGSDARGAKGERGYAGPSG
IPGDPGYPGIRGPPGPPGLTVSEEPGFPGPHGQPGPKGYKGEPGGYNKFEINLFLGPKGT
KGLSGPKGVRGLPGRPGCGDYYCEPGVPGDPGDPGSKGSHGDQGREGIKGCPGECECRFG
VGRVGLPGPPGYPGSPGLPGAQGLMGDPGLKGDEGARGPYGFQGIPGFKGKKGQKGDSFV
ASGKGAKGDRGLPGQIGTPGATGRPGQDGLPGPSGDPGPPGAGYAGLPGPKGDPGVVGPK
GFPGIVGPLGPGFQGPTGPPGPRGDQGYPGTPGVSGRPGPPGEIENCCHEEAIRLPGSKG
EPGSTGIPGEPGRHGLPGVPGHPGLKGLRGDDGGTVGIGLPGPPGLNGDPGDPGRCGIRL
DGPPGPPGIPGLPGRKGMTGDVLSASPGITGPAGQPGVIGTKGPRGFPGNPGSPGIHGQP
GQPGHKGEPGVSGDPGATGTPGPPCTECELNGLPGPPGPPGNPGQRGIPGYLVQKGLKGE
MGPPGHGPKGLQGIPGLPGVPGPPGPSGTIGPSGDTGIDGWPGSKGEIGYPGGAGASGLP
GRPGPPGPRGKQGERGFTGQPGDRGDPGLPGNKGLRGPPGLSGPSGLVNITKGPAGLLGR
RGQPGQQGLAGLKGIRGIPGDSGPKGWPGPPGFKGNVGAPGRGGIPGPPGHLGIKGFSGP
RGYTGNVGDPGDPGPTGHMGIPGRPGGPGAKGEPGKSIGQPGPPGPRGLPGDNGPYAPRG
SPGDSGDPGPRGRPGQPGQPGIPGEPGRLGGLGIPGPCGPSGHQGFPGSPGDQGGLGPPG
PTGPSGPPGPPGPPGLDGLDGLRGPKGLKGASGNDIHGPQGPDGFPGVKGLKGHPGPPGV
NFPGLKGLTGPPGDTGLPGFPGEPGYAGTECSTPSPGPHGDVGYEGPSGLPGLPGEPGPP
GSGISSSGDPGPIGPPGLPGCKGAMGRPGPPGSHNNPGFIGPKGERGPIGPRGAQGPNGQ
QGLPGPRGRKGKTGPAGNRGVRGAPGDSISGQQGMAPPGLPGPIGYPGSPGFPGDVGPPG
TPGRKGEKGSAGPMGGPGLPGPAGPNGPVGDSGEVGQQGFTGLQGVSGQPGDPGEPGHRV
SSRSGFLLVVHSQSIQVPQCPEGSSQLWVGYSLVYLEGQEKAHTQDLGQAGSCLPVFSTM
PFSYCNKAACHYASRNDKSYWLSTTAPIPMMPLFGQEISSHISRCVVCETVSPAVAFHSQ
DHTVPACPPGWRSLWKGYSFLLHTGEGDNGGGQSLTSSGSCLKDFRTHPFIECQGERGSC
HYFANLYSFWLTTVSQTEQFIIPRPGTIKAADQQRRKASQCHVCLRGN
NT seq 4827 nt   +upstreamnt  +downstreamnt
atgggacaaaggggacgtgaagggtcacctggagacaaaggcaggaggggaatagaggga
tcacacggcccagaggggcccaaaggcgaccgtggcaagactggtgcacctggtttccct
ggtaacgatggctcattaggtcaccctggggcaggtggagagcctggtttatcagggctg
gatggctgtaatgggacaatgggtcggccaggagttcctggtgttcatggtttggatggt
ctgcatgggccgccgggaccacctggacctaaaggaattaaaggagaacctttgtatggt
gttacccttcctggacttcctggggagcgtggcagagatggagagcatggtgtacctgga
agacgaggagtcatgggacttaaaggccatgatggcttatctggtcctcctggacttgag
ggcttggtaggacgtgaaggtgtcagaggaccaccaggaaaccctggaggatcactggca
ggtgataaaggcgacgatggtgagcaaggtccacctggcctcccgggtccagaggaagtc
attgaatttcctccaggctttcttccacacaaaggctacaagggagacagaggtcttcct
ggaccctgtggaccaaagggcaaaagggggaatacattagactttgacagacaaagaaat
aaaggagagcaagggatccatggatttcctggactttggggtctacctggtattcctggt
atagatggaccaaaaggacctcagggtttccctggagaggaaggacttccaggtctcatt
ggaagaactggaccaaagggttacccaggagatccaggtctccccggtcccttgcacttt
cataatggaagtgatgccagaggagctaaaggtgaacgtggctatgcagggccatctgga
atcccaggtgaccctgggtacccagggatacgaggacctcctggcccaccagggttaaca
gtatcagaggagccaggctttcctggtccacacgggcagcctggtccaaagggctacaaa
ggagaaccagggggttataacaagtttgaaattaatctgttcctgggaccaaaaggaact
aaagggctctctggacccaaaggtgttagaggcctccctggtcgtccaggatgtggagat
tactactgtgagcctggtgtcccaggtgaccctggagacccaggatccaagggatctcat
ggagaccaagggcgcgaaggaattaaagggtgtccaggggaatgtgaatgtaggtttggt
gtgggaagagttgggctgcctggtccacctggttatccaggatctccagggttacctgga
gctcaaggactcatgggggacccaggtctgaagggagatgagggtgcaagaggaccatat
ggctttcaaggaattcctggttttaaaggaaaaaaggggcaaaaaggtgactcttttgtg
gcaagtggtaaaggtgccaagggggacagaggattgcctggacagattggcactcctgga
gcaacaggtaggccaggacaggatggcctccctggcccctcaggagaccctggaccacca
ggggctggatatgcaggattacctggtcccaaaggtgaccctggtgttgttggacccaaa
ggttttccagggattgtaggccccttagggcctggttttcaaggccctacagggccccca
ggacccagaggagatcaaggatatcctggcaccccaggagtttctggccgaccaggacct
ccaggtgaaattgaaaattgctgtcatgaagaagcaattagattacctggttccaagggt
gagccaggctccacaggaattccaggtgagccaggaagacatggtctcccaggagttcca
gggcacccaggccttaaaggcttgagaggagatgatggtggaactgtagggattggactg
ccaggacctccaggtttaaatggggatccaggtgaccctggtcgctgtggcattaggctg
gatggccctccgggccctccggggataccaggactcccaggcagaaagggtatgacagga
gatgttctctctgcctctccgggcattactggtccagctggccaacctggggttattggg
acaaaaggacctcgtggctttcctggaaaccctgggtctccaggcatacatggccaacct
ggacaaccaggccacaaaggagagccaggagtcagtggtgaccctggtgccactgggacc
ccaggcccaccttgcactgaatgtgaactgaatggactcccaggccctccaggacctcca
gggaaccctggacagagaggaataccaggctaccttgttcagaagggtttgaagggagaa
atgggtccacctggtcatggaccgaagggtcttcaaggaattccaggtctccctggtgtg
ccaggcccacctggacccagtggcaccattggcccctcaggagatactgggattgatggt
tggccagggtcaaaaggtgaaataggctaccctggcggggctggagcaagtggtttacca
ggtcgtcctggacccccaggacctagaggtaaacagggagaaagaggctttactggtcaa
ccaggtgacagaggagacccaggactgccaggtaataaaggtttacgaggtcccccagga
ttatcaggcccatcaggacttgtgaatataactaaaggcccagcaggacttttaggaagg
aggggacaaccaggccaacaaggacttgcaggcttaaagggtatacggggaataccaggt
gactctgggcctaagggatggcctggtccaccagggtttaagggcaatgttggtgctcca
ggcaggggaggaatcccaggacctcctgggcaccttggaatcaaaggtttctctggtcca
aggggatatacaggaaatgttggagatccgggagatccagggcctacagggcatatgggg
ataccagggcgaccaggaggtcctggtgccaagggtgagccaggaaagtcaattggacaa
cctggtccacctggacccagaggactgccaggggataatggaccgtatgcacccaggggg
agtccaggtgattcaggtgacccgggacccaggggaaggccaggacagcccggacaacca
ggcattcctggggaaccaggaagactcggaggattaggcatccctgggccttgtggtcca
tctggccatcaagggtttccaggtagtccaggtgatcaaggaggtctcggcccaccaggt
ccaactggcccaagtgggcctccagggccccctggaccaccaggtctggatggattggac
ggactaagaggtccaaaggggttgaagggagcaagtggcaacgatatccatggccctcaa
ggaccagatggctttcctggagtcaaaggtctgaagggccatccaggacccccaggagtc
aactttcctgggcttaaaggtctgacgggcccacctggtgacacaggtcttccaggcttc
cctggcgaacctggatacgctggcacagaatgcagcacaccttcaccaggaccgcatgga
gatgtaggatatgaaggaccttcaggcctcccaggtcttccaggggaaccaggccctcca
ggcagtggcatttcctccagtggagatccaggaccgattggccccccagggttaccaggt
tgtaagggagccatgggccgcccagggcctccaggatctcacaacaatccaggctttatc
ggtccaaaaggtgagagaggtcccattggtcccaggggtgctcaaggacctaatggtcaa
caaggactccctgggccacggggccgtaagggaaaaacaggtccagctggaaataggggc
gtcaggggagctcctggtgattccatcagtggacaacaagggatggctcctcctggactt
ccaggtccaattggttaccctggatctccgggcttccctggtgatgtgggtcctcctggg
actccaggacgtaaaggagagaagggttctgcagggcccatgggaggccccggtctaccg
ggtcctgctggtcctaatggtcctgttggagactcaggcgaagtgggtcagcaaggattc
actggacttcaaggtgtctctggtcaacctggtgatccaggtgaaccaggtcacagggtc
tcatccaggtcaggtttcctccttgtcgtccacagtcagtcaattcaggtgccacagtgc
cctgaaggcagcagtcagctttgggtgggctacagtctggtgtacctagagggacaagag
aaggctcacacacaagacctgggccaggctggctcttgcctccctgttttctctaccatg
cctttctcctactgcaacaaagctgcctgtcactatgccagccgcaatgacaaatcctat
tggctctctaccactgctcccatacccatgatgccactattcggccaggagattagctcc
cacatcagccgctgtgtcgtgtgtgagacggtgtcacctgcagtggctttccatagccag
gatcacacggttcctgcgtgcccgcctggctggaggagtctgtggaagggctactctttc
ctcctgcacacaggggaaggtgataatggtggtggccagtctctgacctcctccggcagc
tgcctcaaggatttcagaactcaccccttcatagagtgccagggcgagcgaggctcctgt
cactacttcgccaacctctacagtttttggctgactactgtgagtcagacagagcagttc
atcatcccgagacccggcaccatcaaagcagccgaccaacaacgacgcaaggccagtcag
tgtcatgtctgcctcagagggaattaa

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