Paralichthys olivaceus (Japanese flounder): 109640742
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Entry
109640742 CDS
T06037
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109640742 (hps3)
Membrane trafficking [BR:
pov04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
109640742 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
109640742
NCBI-ProteinID:
XP_019960477
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MSSPRSRAKMVHVYNCHPYASQQIVQVEQEPGLVCCGGGALFVVAAGGCKVEAYSVEQEG
CPLLCRFATMGTVRSIQHSKTGDYLVTIEEKNSATYLRAYTNWRHQAEGKARVGVRLLGH
LLRGASVRGGVQMEIIEIPLSERPVAVACCSVTGDLLVGCENTLVLFTLRRPNQQNLQSQ
SPWPNTQQSSSQSQGQNSSSNQNVSILDFERSVIVHLPKMSPKQVALCGGYVAVQAELEV
LVLRLEASSDPKPLDDSPDTDTCVDPLEDQSDLLLVPRQQELLGDRAKDCDMPVSIEKTG
LEDKGQYTLSYVLFRRFTPEFFQGCSVDETQLHSLQLYPLYTSNQSASSEDPACVFCFFS
LPNAGYLYSLKGGVELLSAYQYPEKVLEAVLTDHLLHVITKNALQCFTVRCAALATRIED
PYIDTTMKACPPCSLEVCALRMQLFIGLRSVCVYGRHVILLSAADTETPEETERSTQRRG
LQLKEHTTLTGIFLAVGIDPATTPALESFLSRPFLSRKWTISSPKETSAAGHGWNLYVVD
TVSPLTLYREMVEYSQHYSETSPQAQSLRHLLSEAHLLLCASSLQQSSEDDRSASLQEDA
DRRTERQAAAQRDREELQEALRQNCAQLGDCYSRASQKDCHQALPYYRMSGLSVTEVMVR
NRPLPSSPHSYGLGFLFYLKHFLLEETEQSLSQESADEVIDIFSQSDPSELISVCASPSM
TNISPARTLQIFQHLEDSAGVSVPLTITMATMMLRLDNLPQFSQLMDRHPEMLLVYGFIE
EPRLLLHGGGGGPHTLVRPTALTRQLAKSQPGLLVAGMVALHENNKAQLEQADHIFKELG
CENCLLVDFWEATLMASSQEAVIQELLFRLASVYIDRLTRTNSDTHSSLPHTRPKRRSLK
SAEDLINSSSHYGALYPWLTVLCPAHTTIFQHQEALHKLQSLLCGPSMSIGSVLPLLERL
SEETLWGFSLHLLCATRRGQFDSCIEELLDRCPQAIIAFANHHLQDRNMALWWKKLLPEL
CNRTRAAADNSILLAALKETLVVVATETSPAQFLELIPDDGTASYFLPHLLTCGQRHLLT
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcctagaagcagagcgaagatggtgcacgtgtacaactgtcatccgtacgcc
tctcagcagatcgtgcaggtggagcaggagcccgggttggtctgctgtggaggtggagct
ctgttcgtggtcgctgctggaggatgcaaggtggaggcgtacagtgtggagcaggagggc
tgcccgctcctctgccgcttcgccaccatgggcacagtgaggagcatccagcacagcaag
acaggagactacctggtgaccattgaggaaaagaacagcgccacctacctgagagcctac
accaactggagacaccaggccgagggtaaagcccgtgtcggggtgcgtttgctgggccac
ctgctgcgtggggcgtctgtgcggggcggagtgcagatggagatcattgagattcctctg
tcggagcgtcctgtcgctgtggcgtgttgctcggtcacaggggacctgctggtcggctgc
gagaacactctggttctgttcacgctgaggagaccgaaccagcagaacctgcagagtcag
agtccctggccgaacacgcagcagagctccagtcagagtcaaggtcaaaactcaagttca
aaccaaaacgtttccatcctggactttgaacgctcggtcatcgtgcaccttccgaaaatg
tcacctaaacaggtggcgctgtgtggaggatatgttgcggtgcaggcagagctggaggtg
ctcgtactgagactggaggcatcttctgatcctaaacctctggacgactccccggacaca
gacacgtgtgtcgatcctctggaggaccagtccgacctcctgctcgttccgaggcagcag
gagttgctgggtgatcgagctaaagactgtgacatgcctgtcagcattgagaagacaggg
ctggaggacaaaggacaatacacgctgtcatatgttcttttcaggcgttttactccagag
tttttccagggctgcagcgtggacgagacgcagctccactccctgcagctctacccgctg
tacaccagtaaccagtcagcgtcctcagaggacccagcgtgtgtgttctgcttcttctcg
ctccccaacgccggatacctgtacagtctgaagggtggagtcgagctgctctcagcctat
cagtatccagagaaggtcctggaggcggtgttaacagaccacctgctgcacgtcatcacg
aagaatgcgttgcagtgtttcacggtgcgctgtgcggccttagcaaccaggatcgaagac
ccctacatagataccaccatgaaggcctgtccgccctgcagcctcgaggtgtgtgcgctc
cggatgcagttgtttatcggcctgcgctcagtgtgtgtctacggccgccacgtcatcctg
ctctctgccgccgacacggagacaccggaggagaccgaacgcagcacacagcgccgcggc
ctccagttgaaagaacacaccacgctgactggtattttcctggcggtgggaatcgacccc
gcaaccacgccggctctggagagctttctgtcacgccccttcctgagcaggaagtggacg
atctcctctcctaaagaaaccagcgcagccggacacgggtggaacctgtacgtggtcgac
accgtctctcccctcacgctctaccgagagatggtggagtacagccaacactattcagag
accagcccgcaggcccaaagccttcggcacctcctcagtgaagctcacctcctcctctgc
gcctcctcgctgcagcagagcagcgaggacgaccgctcggcgtctctgcaggaagacgca
gacagacggacggagagacaggcggctgcacagagagacagggaagagctgcaggaggct
ctgaggcagaactgtgcacagctgggagactgttacagcagggcgagccagaaggactgt
caccaggctctgccgtactacaggatgtccggtctgtcagtcacagaggtcatggtcagg
aaccgcccacttcccagcagccctcactcctatggcctcggcttcctgttttacctgaag
catttcctcttagaggaaacggagcagagcctcagtcaggaatcagccgacgaggtcata
gacatcttcagccaatcagatccctcagagctcatcagcgtgtgtgccagcccgtccatg
acaaacatcagtccggctcggacgctgcaaatcttccaacatctggaggacagcgctggc
gtgtcggtcccgctgaccatcaccatggcgaccatgatgctgcgtctagacaacctgcca
cagttctcacagctgatggacagacacccagagatgctgctggtttacggtttcatcgag
gagccgaggctgctgcttcacggtggaggcggcggcccgcacacgctcgtccgtcccaca
gcgttgactcgccagctggcaaagtcccagccaggactgctggtggccgggatggtggct
ctgcatgagaacaacaaggctcagctggaacaggctgaccacatattcaaggagctgggc
tgtgagaactgtttactggttgatttctgggaggcgaccctcatggcctcctcacaggaa
gctgtcatccaggagcttctgttcagactggcttctgtctacatcgaccggctgacgcgc
acaaactcagacacacactccagccttcctcacactcgtccaaaacgcaggtcgttgaag
agcgctgaagatctgatcaactccagctcccattacggtgctttgtacccgtggctcact
gttctgtgtcccgctcacactaccatcttccaacaccaggaggcgttacacaaactgcag
tctctcctgtgtggtccgtccatgtccattggttctgtcctccctctgttggagcgcctg
tcggaggaaaccctgtggggcttcagcctgcacctcctctgcgcaaccagaagggggcag
tttgacagctgcatagaggagttgctggacagatgtcctcaggccatcatagccttcgcc
aatcaccatctgcaggacaggaacatggcgttatggtggaagaagctgctcccagaactg
tgtaatcggacgagagctgcagccgacaacagcatcctactggctgctctcaaagagacg
ctggtagtggttgccacggagaccagcccggcacagttcctggagctcatacctgacgac
ggcacggcatcgtacttcctgcctcacttgttgacgtgtggccagagacacctgctgacc
tga
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