Paralichthys olivaceus (Japanese flounder): 109641040
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Entry
109641040 CDS
T06037
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109641040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pov04121
]
109641040
Enzymes [BR:
pov01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
109641040
Ubiquitin system [BR:
pov04121
]
Ubiquitin ligases (E3)
HECT type E3
109641040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
109641040
NCBI-ProteinID:
XP_019960901
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MLSWGEDGHQVFRAVDSSLEVRQCSPGYVVRDLSAGHSVLSFIKTNGNAFIIRTNQNKDG
KRVRGKQKFVECKEKIRAVSCGDDHVSLLSDRGSVLCVDTTHHPFTPRLQKELCNIPVRQ
VACGSQHSVVLTNDGRVYTWGQDSRGQLGLGEGKPGANSPQHLRSLSSIALVHIAAGGEQ
SFALSVSGGVFGWGRNDRGQLGLGDTTDRRTPAPVKCLNMKGTVHISCGKDHTATLTKDG
AVFTFGSGQYGQLGHNSFADELRPRLVVELLGAKVTEIACGIHHTLVLTDAKKVYSFGCG
EQGQLGHGDESHPSVPLPVQLPQDGGEGPKIRNIFAGGNCSFATCSSNEEVHEEPNTDGA
SDTKRCCLEDMIDKWTTKCDSKSWKKIKQEINRTFSNACCMNQSFLEKRKEKHFHTSSKY
PGLNLSLARLAFKKLVENDDVFAEVEAAVLKLLLPSCTDPAGVEGLRIFLLLNELLHVMQ
KLKRPQSTKLAEAVAAAAVGLSDENLQVLGNWWTSLSASTMSKYVKVWKKALSVFLSSNP
VPRHTGVRNLLQVLQYMYNANSRTPESRRMPDSDFYLLIDKNFLIEDLRLWFLQSKNKRV
GAEPLILCSFPIVMDLQSKKMVLDQYAEFNKQWGLNLLVPQDSLFRLDLRRASISEDTFK
QLDAVHHSDYKKRLVVFFDKNYTTVSYVYMKDFFHEVFHELVSDESKMFIFNDSRTLAWF
PSRATHDHRRYFLFGVLCGLALYNQCIIHLPFSTALFKKLLGVKPSLEDIMEFSPDVGKS
LLSILEEYEDEDFESLELCFSINWDGKDVDIDPINPEKPVTSQNKKEFVDAYVNHVFNTS
VENVFLEFRRGFFKVSDRDLVKLLQPEELQEVLVGKDFRAWERLKQNASYHWPYHVDHPN
IRMFWEVFDDLTEDQRKKFLWFVTGFERLPILGNNTITIRPREFWQDSQDQYFPESLTCH
SYLDLPLYSTREIMKTKLMEALNNSRRNYK
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtggggggaggacggtcaccaggtcttcagggccgtggacagctcgttagag
gtgcgtcagtgcagcccgggctacgtcgtcagggacctgtctgcaggacacagtgtgctc
agcttcatcaaaaccaacggaaacgcttttatcatccggacaaaccagaacaaagatgga
aaaagagtcagaggaaaacagaagtttgtggagtgtaaggagaagatccgggccgtgagc
tgcggagatgatcatgtctcactgttgtctgacagaggctcagttctctgtgtggacaca
actcaccaccccttcacaccgaggctgcagaaggagttgtgtaacatacctgttcgtcag
gtggcgtgtgggagtcaacattcagtcgtcttgaccaatgatggtcgagtttacacgtgg
ggtcaggattccaggggccagctgggtctgggggaggggaagcccggcgccaactcgccc
caacacctccgctctctgtcgtccatcgcgctggttcacatcgccgcggggggggagcag
agcttcgccctctctgtcagcggaggggtgttcggctggggcagaaacgaccgtggacag
ctcgggctgggagacacaacagacagacgtacaccagctcctgtcaaatgtctgaacatg
aagggaaccgttcacatttcctgtgggaaggatcacactgccactttaactaaggatggt
gcagtgtttaccttcggctcgggtcagtacgggcagcttgggcacaactcattcgccgat
gagctccgtcctcgtcttgttgtggagctgttgggggcaaaggtcaccgagattgcgtgt
ggaatacaccacacattagtgttgacagacgccaagaaggtttactcctttgggtgtgga
gagcaagggcagctgggacatggagacgagagtcatccgtctgtgccgctccccgtccaa
ctgccacaagacggcggtgagggtcccaaaatcagaaacatcttcgcaggaggaaactgt
tcatttgcgacgtgctcgtctaatgaggaagttcatgaggagccaaacactgacggggcc
agtgatacgaaacgatgttgtcttgaagacatgatcgacaaatggacgactaaatgtgat
tcaaaatcctggaaaaagataaaacaggaaatcaacaggaccttttccaatgcgtgttgt
atgaatcaaagcttccttgagaaaagaaaagaaaaacatttccacacctcttcaaagtac
cccggcttgaacttgtcgcttgcacgactcgctttcaagaaactggtggagaacgacgat
gtgtttgcagaggtggaggccgctgtcctgaagctgcttctcccatcttgcacggatcca
gcgggagtggaggggttgaggatcttcttgcttctcaatgagcttcttcacgtgatgcag
aagctcaaacgaccacagagcacgaagctcgctgaggccgtcgccgctgccgctgtgggg
ctgtctgatgaaaaccttcaggtcctagggaactggtggacgtcattgtcagcctccacc
atgtctaaatatgtcaaggtttggaagaaagctctctcagtcttcctgtcctcaaaccct
gttcctcgccacactggagtcagaaatctgctacaagtcctccagtatatgtacaatgcc
aacagcaggactccagaatctagaaggatgccagacagcgatttttacttgctcattgac
aaaaactttcttattgaggatctgcgtctttggtttttacagtcgaaaaacaagcgtgtg
ggtgctgagcctcttatcctttgtagctttccaattgtgatggatctgcaatcaaagaaa
atggttctcgaccagtatgcggaattcaacaagcagtggggactcaatcttctggttcct
caagactcactgttcagactggacctgagacgagcatccatttcagaagacacttttaaa
caactggatgccgttcatcacagtgactacaaaaaaagacttgtggtcttttttgataag
aactacactacagtgagctatgtctacatgaaagacttttttcatgaagtctttcatgag
ctggtgtcagacgaatcaaagatgttcattttcaatgactccagaacactggcctggttc
ccctccagagcaacacacgaccaccgcaggtacttcctgttcggagttctatgtggattg
gctttgtacaaccagtgcatcatacacctaccgttctcaacggctctgttcaagaagcta
ctcggtgtgaagccttccctggaggacataatggaattcagtccagacgttggaaagagt
ctgctgtccatcctggaagaatacgaagacgaagactttgaaagcctggagttatgtttt
tcaatcaactgggatgggaaagacgttgacattgatcccataaaccctgaaaaaccagtg
acaagtcaaaacaagaaggagtttgttgacgcctacgtgaatcacgtcttcaacacatct
gtggagaacgtgtttctggagttcaggcggggcttcttcaaggtttccgaccgggacttg
gtgaagctgttgcagccagaggagctgcaggaagtcctggtgggcaaagacttccgtgcc
tgggaaaggctgaaacagaacgcaagttaccactggccgtaccatgttgaccaccccaac
attcggatgttttgggaggtttttgacgatctaactgaggatcagaggaagaagttcctt
tggtttgtgaccggttttgaaaggttgccaattcttggcaataacaccatcaccatcagg
cccagggaattctggcaggactctcaggaccagtacttccctgaatccctcacctgtcac
tcttacctggatctgcccctatactcaacaagggagattatgaaaaccaagctgatggag
gccttaaacaacagtagaagaaactacaagtga
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