Paralichthys olivaceus (Japanese flounder): 109641177
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Entry
109641177 CDS
T06037
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pov03016
]
109641177 (tsen34)
Enzymes [BR:
pov01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
109641177 (tsen34)
Transfer RNA biogenesis [BR:
pov03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
109641177 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
SCAI
Motif
Other DBs
NCBI-GeneID:
109641177
NCBI-ProteinID:
XP_019961105
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MDDAPYRQEEDSSACDVIGVGVCDSAPLLWRIEDLKTLRRHGLVGALLGSLPRTPRQNGR
LGRPLRLLPEEERQLSEQHGAAALPSGNQLPQQDGGGVDLCRQAEQHEEEQRRSYEVQSV
LALEDRKSALLRAMTSSHTDSDSGPGTSDEALRGRLEALDHSFTFPWAALAVQLSTSRAG
LTYCPVDRAVLRADWPIRAQRGTRGDVRYQVFRDLRGRGFYLTSAGKFGGDFLVYPGDPL
RFHAHFIAICLSLDESLCVLDVLAVARLGSNVKKTVLLCSPGTDGAVRYTSLQWSGMV
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgccccctacagacaggaggaggactcgtctgcctgtgacgtgatcggtgtg
ggtgtgtgtgactccgcccccctgctgtggaggatagaggacctgaagacgttgaggaga
catggcctggtgggggcgctgctgggttcactgccccggacgccccgacagaacggacga
ctgggacgacccctccgactgctgccagaggaggagagacagctgagcgagcagcacggt
gccgccgcgttaccctccggtaaccagctgcctcagcaggacggaggaggggtggatctc
tgtcgacaggcggagcagcacgaggaggaacagaggaggagctatgaggtgcagagcgtc
ctcgctctggaggacaggaagtcagcattgctccgagcaatgacctcatcacacacagat
tcagactctggacctgggacctcagatgaggccctgcggggccgcctggaggccctggac
cacagctttaccttcccttgggcagcgctggcggtgcagctgagcacatcgagggcgggg
ttgacctactgcccagtggatcgggccgtcctgcgggctgactggccaatcagggcgcag
cgtggcacacgcggtgacgtcaggtaccaggtgttcagagacttgagggggcggggcttc
tacctgacctcggcagggaagtttggaggcgacttcctcgtttatccaggtgaccctctt
cgtttccacgcccacttcatcgccatctgtctgtctctggatgagtccctctgcgtgttg
gacgtccttgccgtggctcgtctgggatccaacgtgaagaagacggtgctgctgtgctcg
ccggggacggacggagcggtgcggtacacgtcgttacagtggagcgggatggtgtga
DBGET
integrated database retrieval system
