Paralichthys olivaceus (Japanese flounder): 109641546
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Entry
109641546 CDS
T06037
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov00260
Glycine, serine and threonine metabolism
pov00630
Glyoxylate and dicarboxylate metabolism
pov00670
One carbon pool by folate
pov01100
Metabolic pathways
pov01200
Carbon metabolism
pov01230
Biosynthesis of amino acids
pov01240
Biosynthesis of cofactors
pov04981
Folate transport and metabolism
Module
pov_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
109641546 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
109641546 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
109641546 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
109641546 (shmt1)
Enzymes [BR:
pov01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
109641546 (shmt1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
109641546
NCBI-ProteinID:
XP_019961599
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All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MEEAAVGGGSSGIWCHSNRITISQRPELLLHWRVSDLHVLRTHRTSHVEFKFFRFRVTKE
SAAMSVTNGQSVSKETWDSHNKMMLEPLGINDSEVFSIIKKEKHRQTYGLELIASENFAS
RAVLEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSEKWGVNVQPY
SGSPANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNQET
GYIDYDRLQENARLFHPRLIIAGTSCYSRNLDYARLREIANENGAYLMADMAHISGLVAA
GVVPSPFEFSDIVSSTTHKTLRGCRSGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPG
LQGGPHNHAIAGVAVALKQAMTPEFKAYQTQVLANCKALSTALIDYGYKIVTGGSDNHLI
LLDLRSKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGFEQDDFK
KVAEFIHRGVELTLEVQRSLDPKATLKVFIQALSQEEKFQQRVAEIKAEVEAFAGHFPMP
GLPEL
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcagcggtgggtggaggttcatcggggatctggtgtcactccaaccggata
accatctctcagcgcccggagcttcttctccactggcgggtgagcgacctccacgtgctg
cggactcaccgaacctcacatgtggagttcaaattttttagattccgtgtgaccaaagaa
tcagcagccatgtctgtaacaaacggccaaagtgtgagcaaggagacgtgggactcgcac
aacaagatgatgctggagccccttggcatcaacgactcagaggttttctccatcataaaa
aaagagaagcacaggcagacgtacggtctggagctgatagcatctgagaactttgctagc
agagcagttcttgaggctctgggttcctgtatgaacaacaagtactctgagggatacccc
ggacagaggtattatggtggtaccgagcatgttgatgaactggagagactttgtcagaag
agggcgctggaggcctatggtctggactcagagaaatggggtgtcaacgtgcagccatac
tcaggttcgcctgctaacttcgcggtctacacggccatcgtggagccccacggcaggatc
atgggactggacctccctgatggaggtcacctgacgcacggcttcatgaccgaaaagaag
aaaatctcagcaacgtccatcttcttcgagtcaatgccgtacaaggtgaatcaagagacg
ggctacattgactatgacaggctgcaagaaaacgcacgtctgttccaccccagactcatc
attgcaggaactagctgctattcccgcaacctcgactacgctcgtctgagggagatcgcc
aacgagaacggtgcatacctgatggcagacatggctcacatcagtggtttggtggctgcc
ggtgtggtgccctcaccctttgagttctctgatattgtttcctcgacaacgcacaagacg
ctgcgtggctgccgctctggacttatcttctacaggaaaggtgtgcggagtgtcgatgcg
aaggggaaggagactttgtacaacttggagtctttgattaatcaggctgtgtttcctggg
ctgcagggaggaccacacaaccacgctattgcaggtgtcgctgtagctctcaaacaagcc
atgaccccagagttcaaagcctaccagacgcaggttcttgctaactgcaaagctctgtcc
actgccctcattgactacggctacaagatcgtcactggtggctctgacaaccatctgatc
ctgctggacctgcgcagcaagggaactgatggaggacgagctgagaaggttctggaagcc
tgtgctatcgcttgtaataagaacacctgtccaggggataaaagtgctttgcgcccgagt
ggtctgaggtttggctctccagctctgacctccagaggctttgagcaggatgacttcaag
aaggtggcagagttcatccaccgaggtgttgagctgaccttggaggtgcagagaagcctg
gatcccaaagccacccttaaggtgttcattcaggctttgtcacaggaagaaaagttccag
cagcgggtggcagagatcaaggctgaggtggaagctttcgctggtcatttccccatgccc
ggcctccctgagctgtag
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