Paralichthys olivaceus (Japanese flounder): 109641547
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Entry
109641547 CDS
T06037
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109641547 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109641547 (cpsf4)
03019 Messenger RNA biogenesis [BR:
pov03019
]
109641547 (cpsf4)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109641547 (cpsf4)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109641547 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
109641547
NCBI-ProteinID:
XP_019961602
LinkDB
All DBs
Position
Unknown
AA seq
266 aa
AA seq
DB search
MQDLLANAEHIKFDLELAVEQQLGAQPLPFPGMDKSGSAVCEFFMRAACVKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCPEGKSCKFMHPRFELPMGASEQPP
LPLQVQNQAKPVPTIGRSSLSLIQLTNSSPSQRPQNNTVMGGYQQNNMTSNRGPRPLDQV
TCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttactggccaacgcggaacacatcaagttcgacctggagctcgctgtggag
cagcagctgggggcgcagccgctgcccttccccggcatggacaaatccggatccgctgtg
tgcgagttcttcatgagagcagcttgtgtgaaaggtgggatgtgtcctttccgtcacatc
agtggagagaagacggtggtgtgtaagcactggctccgaggactgtgtaagaagggagac
cagtgcgagtttctccatgaatacgacatgaccaagatgcctgaatgctacttctactcc
aagtttggtgagtgcagcaacaaggaatgtccgttcctgcacatcgatccagagtccaag
atcaaggattgtccctggtacgaccgaggcttctgcaaacacggtcccgactgcagacac
agacacacaagaagagtgatctgtatgaattacctggtcggattctgtccagaaggaaaa
tcctgtaaatttatgcaccctcgttttgagttgcctatgggagcctctgaacagcctcct
ctaccactacaagtccagaaccaagcaaagccagtgcctaccatcggccgctcgtcgctc
tctcttatccagttgaccaactccagtccaagccagcggccgcagaacaacacagtcatg
ggcggttaccagcaaaataacatgaccagcaacagagggcctcgtccattggaccaggtc
acatgctacaagtgtggagagaagggccactatgcaaacaaatgcacaaaaggccacctc
gccttccttagtggacagtga
DBGET
integrated database retrieval system
