KEGG   Paralichthys olivaceus (Japanese flounder): 109641693
Entry
109641693         CDS       T06037                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03030  DNA replication
pov03410  Base excision repair
pov03420  Nucleotide excision repair
pov03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109641693 (rfc2)
   03410 Base excision repair
    109641693 (rfc2)
   03420 Nucleotide excision repair
    109641693 (rfc2)
   03430 Mismatch repair
    109641693 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pov03032]
    109641693 (rfc2)
   03036 Chromosome and associated proteins [BR:pov03036]
    109641693 (rfc2)
   03400 DNA repair and recombination proteins [BR:pov03400]
    109641693 (rfc2)
DNA replication proteins [BR:pov03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    109641693 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    109641693 (rfc2)
Chromosome and associated proteins [BR:pov03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    109641693 (rfc2)
DNA repair and recombination proteins [BR:pov03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     109641693 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    109641693 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA AAA_assoc_2 DNAX_ATPase_lid AAA_22 PPR_1 DEAD
Other DBs
NCBI-GeneID: 109641693
NCBI-ProteinID: XP_019961782
LinkDB
Position
Unknown
AA seq 257 aa
MKEAVLELNASNERGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRI
MEIYSKTTRFALACNASDKIIEPIQSRCAVLRYSKLTDGQILARLQEVVEKERLSVSDDG
LEAVIFTAQGDMRQALNNLQSTNSGFGYINSENVFKVCDEPHPLLVKSMLGHCVEGKIDE
AYKVVEQLWALGYSPEDIIGNIFRVCKTLQMAEYLKLEFIKEIGYTHMRVAEGVNSLLQM
AGLLGRLCSKTTTPPAS
NT seq 774 nt   +upstreamnt  +downstreamnt
atgaaggaagccgtgctggagctcaacgcttccaacgagcgaggaatcgacgtggtgagg
aataaaatcaagatgtttgctcagcagaaagtcacgctgcccaaaggacgacacaagatc
atcatcctggacgaggccgacagcatgactgacggagctcagcaggctctcaggaggatc
atggagatctattccaagacgacgcgcttcgctctcgcctgcaacgcctcagataagatc
atcgagccgatccagtcccgctgtgcggtgctgcgttactccaagctgaccgacggacag
atcctcgcccgcctgcaggaggtggtggagaaagagcgtctgtctgtgtctgacgacggg
ctggaggccgtcatcttcaccgcccagggagacatgagacaggcgttgaacaacctgcag
tcgaccaactccggcttcggctacatcaacagtgagaacgtgttcaaggtgtgtgacgag
cctcaccctctgctggtgaaaagcatgctgggacactgcgtggaggggaagatcgacgag
gcctacaaggtggtggagcagctgtgggcgctgggctactccccagaggacatcatcgga
aacatcttcagggtctgcaagaccttgcaaatggccgagtacctcaaactggagtttatc
aaggagatcggttacactcacatgcgagtggctgaaggtgtgaactctctgctgcagatg
gccggactcctcggacgactctgcagcaagacgacgacgccccctgccagctga

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