KEGG   Paralichthys olivaceus (Japanese flounder): 109641747
Entry
109641747         CDS       T06037                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov04382  Cornified envelope formation
pov04510  Focal adhesion
pov04512  ECM-receptor interaction
pov04518  Integrin signaling
pov04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pov00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109641747 (col4a5)
   04518 Integrin signaling
    109641747 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109641747 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109641747 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    109641747 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pov04147]
    109641747 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:pov00536]
    109641747 (col4a5)
Exosome [BR:pov04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   109641747 (col4a5)
Glycosaminoglycan binding proteins [BR:pov00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   109641747 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 109641747
NCBI-ProteinID: XP_019961846
LinkDB
Position
Unknown
AA seq 1686 aa
MEIRDTVRLCEGFGAFRLNKNICLVSPQACHGCVGSKCDCSGVKGAKGERGFPGLTGQPG
VPGFPGPEGPIGGRGEKGSDGPQGPGGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGPRG
VAGCNGTKGERGFPGTSGIPGQQGLMGPPGLPGSKGDPGDVISSNRFGDNGAVGLPGVPG
VPGSPGPPGLQGPLGPPGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGEPGLQGPAGP
PGQVGEQKRPPETEIQRGDKGDPGLPGPRGDPGYPGSPGPSGGQKGSKGEPGEAGKRGKP
GKDGDPGPPGYPGGKGESGLPGPPGRDGERGFKGERGFTGPPGVVIGGQTGGRVGPKGEP
GYPGSPGLKGDRGPAGSTGPPGPPGRPAVGGGGQPGPPGFPGERGQKGDGGAPGLSLPGA
PGRSGSPGSPGPQGPPGPPGFSSSAQNCVAGEPGRPGVQGERGYPGNSGQKGEKGETCVN
CFNDISSIPGEKGLPGPPGFPGNPGNPGLKGDRGFPGNPGSAGPAGAPGPQGSAGFPGEK
GDPGDAITVPGGRGEKGDTGFPGPPGLPGLDGRPGRDGQPGSPGPKGSSGSLLVKGERGP
PGEPGSPGNPGDRGPPGGPGFGPQGPSGEKGIQGVSGRPGGPGAPGAKGEPGLTVAEKGL
PGPRGQDGEPGRPGPPGDAGQFGQPGFPGLPGVKGEPGLPGIGLPGPPGSKGFPGIPGQP
GSPGGPGRPGVDGLSGQPGIPGSKGEPGFGLPGPPGLPGVPGSKGFPGPKGDPGFSGGPG
SPGRSGFDGTPGSKGEPGLSGVPGARGPPGSPSTGSFGLPGSPGAPGPMGPPGFPGSNGE
KGDPGPPGLDIPGLPGDRGNPGFPGSTGPAGTPGPPGGPGRDGLPGLPGQKGDMGPMGSP
GPSGGPGGPGGPGAPGLKGEPGFSGRDGSPGGSGIKGERGDPGVAGPPGPTLTAAAVKGT
KGDSGLPGGPGFPGQKGVSGLPGDPGLPGSDGRPGLPGPPGPKGDAGFPGGPGGPGAPGL
KGSMGEMGFPGPAGQKGLPGLSGRPGTSGQPGGPGFPGAKGEPGSAGVGPPGPPGFKGEP
GQSGFPGSPGLKGAPGSPGLSGLPGSPGTKGDPGLPGFQGSPGIPGPKGLDGGPGSPGLT
GSPGRPGEPGRPGASGFPGDKGQAGRDGIPGPAGVKGEPGLPGHGAPGASGLPGFPGAKG
DPGLPGPSGSPGFPGSKGEAGFPGSPGPSGNSGPPGPPGLAVQGPKGLQGPPGPPGRAGP
SGPPGPGGPQGPRGPAGSGGVKGEKGIPGAPGQPGFSGQKGESGVPGFPGTSGVPGGSGI
KGDIGLPGVPGFPGPKGDPGISGSNGLPGDPGDIGPVGPPGDPGLSPTPIVVKGERGPPG
PQGQQGGQGLPGSSGRDGLPGQPGNPGDPGTEGPPGFSGPPGRKGDTGPAGQPGQRGYPG
PPGSDGPQGQPGLPGTASAAHGFLITRHSQGTEVPYCPDGTSSIYDGYSLLYVQGNERAH
GQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMDPLRGESIKP
FISRCSVCEAPAMVIAVHSQTIQIPSCPGNWEALWIGYSFMMHTSAGAEGSGQALASPGS
CLEEFRSAPFIECHGSGTCNYYGNSYSFWLATVEPSEMFRKPQSETLKAGNLRTRVSRCV
VCMKRT
NT seq 5061 nt   +upstreamnt  +downstreamnt
atggagattagagacacagtccgactctgtgaaggttttggagcctttcggttgaataaa
aatatttgtcttgtttctccgcaggcttgccatggatgtgtgggatccaaatgtgactgc
agtggagtgaaaggagccaaaggtgaacggggtttcccaggtctcaccggacagccaggg
gtcccagggttccccggacccgaggggccgatcggaggaagaggagagaagggcagcgac
ggacctcaaggaccaggcggtccaaaaggaatcagagggcctccaggattgcctggattt
ccaggaacaccaggtcttccgggtctgccgggtcaggacggacctccgggcccgagaggc
gtggcaggatgcaacggaacaaagggtgaacggggtttcccaggaacttccgggatccca
ggacaacagggtctaatgggaccaccaggtctgccagggtcaaagggagatccaggtgac
gtgatctccagtaatcggtttggagataatggagcagtgggattacctggagtaccagga
gttcctggctcaccggggccccctggtttacaaggtccactcgggcccccgggacccaga
ggttatgagggtcgtccaggtcctcccggtcctcctggacccaagggaaacatgggtttg
aacttccaaggacccaaaggagagaagggagaaccaggtttgcaaggacccgccggtccc
ccaggacaggtgggagaacagaagaggcccccggagacggagatccagagaggagacaag
ggcgacccaggacttcccggccctcggggtgatcccggttatccaggttctcccggcccc
tcaggtggacagaaaggaagcaagggcgaaccaggagaggccggcaaacgaggtaaacca
ggcaaagatggcgaccccggtcctccaggatacccgggaggcaaaggagagtcaggcctg
ccaggtcctccaggcagagacggagagagaggtttcaaaggagagcgtggattcacaggt
ccacctggagtggtgattggcgggcagacaggaggtagggtcggtccgaaaggtgagccc
ggataccccggatcacctggactcaaaggagatcgaggaccagcaggttcaacgggacca
ccgggaccaccaggacgtccagccgtcggtggcggcggtcagcctggacctcccggtttc
cccggagagagaggtcagaagggagacggtggtgctccaggcctctctttaccaggagcc
ccaggacgatctggatctcctggcagcccgggaccacaggggccccctggacctccaggc
ttttccagcagcgcacaaaactgcgtcgccggagaacccgggcgccccggtgtgcagggc
gagagaggttaccccggaaattcgggacagaaaggtgagaagggcgaaacctgcgtgaac
tgcttcaatgacatcagctcgatcccaggagagaaaggacttcctggaccacctggattc
ccaggtaatcctggcaacccgggtttgaaaggagacagaggatttccagggaatcccgga
agtgctggacccgctggtgcccccggccctcaaggttccgcaggattccccggagagaaa
ggtgatccaggtgatgccatcacagtccctggtgggcggggagagaagggtgacactggc
ttccctggaccccccggtcttcccggtctggacggtcgacctggtcgtgatggacaacct
ggatccccggggcccaaaggatcttctggctctctgctggtaaaaggagaacgaggaccc
cccggtgagccgggttctcctggtaatccaggagacaggggtccgccaggtggccccggc
tttggacctcaagggccttccggagaaaagggtatccagggcgtctctggaagacctgga
ggtcccggtgctcctggtgctaaaggtgaacctggcctgacagtggcagagaaaggttta
ccaggacccagaggacaggatggagagcctggacggcctggtccaccaggtgacgcaggt
cagtttggacagcctggtttccctggtttacccggagtgaagggtgaacctggcctccct
ggcatcggactccctggacccccaggatctaaaggattcccaggtatcccaggtcagcca
ggatctcctggaggaccaggcagaccaggagtagacggactctccggccagcctggaatt
cctggatccaagggtgaacctggcttcggacttcccggcccacctggtttacctggagta
cccggatctaaaggtttccccggaccaaagggagatcctggtttctctggtggccctggt
tcaccaggaagatctggatttgatggcaccccaggatccaaaggcgagcccggtttatct
ggtgtccctggagctcgtggcccaccgggatccccctccactggctcatttgggctccca
ggctcccctggagctccaggcccgatgggaccaccaggattccctggatcaaatggagag
aaaggtgaccccggtcctccaggtctagatatcccaggtttgccaggagatagaggaaat
cccggtttcccaggttctacaggaccagctggaaccccaggacctcctggagggcctgga
cgagatggtctgcctggattgccaggtcagaaaggtgacatgggtcccatgggatcccca
ggaccctccggaggaccgggaggcccaggaggacctggtgctcctggacttaaaggtgaa
cctgggttctcaggtcgagatggttctcctggtggttccggcattaaaggagaaaggggt
gaccccggtgtcgcaggacccccaggtcctaccctgacagcagcagccgtaaagggaacc
aaaggagattcaggacttccaggtggaccaggttttccaggtcagaaaggtgtcagcggt
ctccccggagacccaggacttccaggatcagatggtcgccctggactccccggaccacca
ggtccaaagggcgatgctggattcccaggaggcccgggaggacctggagctccaggacta
aaaggcagcatgggagaaatgggatttcctggaccagcagggcagaagggtctaccaggt
ctgtctgggcgaccaggaacctcaggacagccaggaggaccgggtttccccggagccaaa
ggtgaaccaggttctgccggagttgggccacctggaccacctggattcaagggtgagcca
ggtcagtcagggttcccaggaagtccaggactcaaaggagctccaggatcacctggtctc
tcaggtttacctggaagtccaggtaccaaaggtgatcctggccttcccggattccaaggt
tctcctggtatcccaggtccgaagggtcttgacggtggtcccggctccccaggtctcacc
ggatcaccaggtagaccaggagagcctggccgacctggagcatcaggttttccaggagat
aagggtcaggcaggtcgtgatggaatcccaggaccggctggagtcaagggagagcccggg
cttcctggtcacggagcccctggtgcctctgggcttccagggtttccaggtgcaaaggga
gacccaggtcttcccggtccctctggcagccccggtttccccggctctaaaggagaagct
ggcttccctggttcccctggtccttcaggaaacagtggccctcctggccctcctggactg
gctgtgcagggccccaaaggactccaaggtccccctggacctcctggacgagcaggtccc
tcaggtcctccaggtccaggcggcccgcagggtccccgcggacctgcaggaagtggcggc
gttaagggagagaagggtattcccggcgctcctggccagcccggcttctctggacagaag
ggagagtctggtgttccaggattcccgggtacctctggtgttcctggcggctctggtata
aagggagacatcggtctgcctggcgttcctggattcccgggacccaagggagacccagga
attagcggtagtaatggtcttcctggagatcctggagacattgggcctgtcggccctcct
ggtgaccctggtttatctccgactcccatcgtggtgaagggagagcgaggacctcctgga
cctcagggccagcaaggtggccagggactgcctggttcttctggacgtgatgggctgcca
ggtcaacctggtaaccctggagatcctggtaccgagggccctcccggcttcagcggccca
cccggcaggaaaggagacacaggacccgccggtcagcctggtcagcgaggttaccctggt
ccccctggttcagacggtccacagggtcagcctggtctcccaggaacagcctctgcggcc
cacggcttcctcatcacccgacacagccagggtacggaggtgccctactgtcccgacgga
acaagcagcatctacgacggttactcgctgctgtacgtgcagggcaacgagagggctcac
gggcaggaccttggcacggctggcagctgtctccgcaggttcagcaccatgcccttcatg
ttctgcaacatcaacaacgtctgcaacttcgcctcccgaaacgactactcctactggctg
tccacgcccgagcccatgcccatgtccatggacccgctcagaggggagagcatcaagcct
ttcatcagcaggtgttcagtgtgtgaagctccagccatggtgatagcagtgcacagtcag
accatccagattccatcgtgcccagggaactgggaagctctgtggatcggatactccttc
atgatgcacaccagtgcaggtgcagagggctccggtcaggccctggcctctcccggctcc
tgcctggaggagttccgcagcgctcccttcatcgagtgccacggcagcggcacctgcaac
tactacggcaactcctactccttctggctggccactgtggaaccctctgagatgttcagg
aagccacagtcggagactctcaaggcggggaacctacggacgcgcgtcagccgttgcgtg
gtctgcatgaagaggacgtaa

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