KEGG   Paralichthys olivaceus (Japanese flounder): 109641808
Entry
109641808         CDS       T06037                                 
Name
(RefSeq) syndecan-4-like isoform X1
  KO
K16338  syndecan 4
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov04512  ECM-receptor interaction
pov04514  Cell adhesion molecule (CAM) interaction
pov04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pov00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109641808
   04514 Cell adhesion molecule (CAM) interaction
    109641808
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109641808
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pov00535]
    109641808
Proteoglycans [BR:pov00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   109641808
SSDB
Motif
Pfam: Syndecan WBS28 Glycophorin_A
Other DBs
NCBI-GeneID: 109641808
NCBI-ProteinID: XP_019961932
LinkDB
Position
Unknown
AA seq 222 aa
MLRLLLLLALSASVCSESQVRETETWMPMKTTQTVAMSTHSDGLESSGDAQNGSDFGFTD
DEDDEDDEDDNDYYTDNYEDEYVESSGSGDGATTVSPEPESEPSVKPDANDNKIPDVEPP
VRPTVNEVDIVQNSNEIPLVRMDAETSEDYPSNVLMAHASDDSIFNKTEVLAAVIAGCAV
GLMFAVLLILLLIYRMKKKDEGSYELGKKPIYKKAPTTEIYA
NT seq 669 nt   +upstreamnt  +downstreamnt
atgctgcggctgctgctcctcctcgcgctgtccgcctccgtctgctccgagtcgcaggtt
agggagacggagacgtggatgcccatgaagaccacacagaccgtcgccatgtcgacacac
agcgacggcctggagtcatcgggagacgcccagaacggctccgacttcggcttcacggac
gacgaagacgacgaagatgacgaagatgacaacgactactacaccgacaactatgaggac
gagtacgtcgagtcatctgggtcaggagacggagcaacaactgtgtcacctgagccagag
tccgagccgtcagtgaagccggacgccaacgacaacaagatcccagatgtggagcctccg
gttcgaccaaccgtcaacgaggtggacatcgtccagaacagcaacgaaatcccactggtg
aggatggacgccgagacgagcgaggactacccgtccaacgtcctcatggcccacgccagt
gatgacagcatctttaacaagaccgaggtcctcgcagctgtgatcgcaggctgcgccgtc
ggcctgatgttcgccgtgctcctcatcctcctcctcatctaccgcatgaagaagaaggac
gagggcagctacgagctggggaagaagcccatctacaagaaggcccccaccacagagatc
tacgcatag

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