Paralichthys olivaceus (Japanese flounder): 109641838
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Entry
109641838 CDS
T06037
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109641838
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109641838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
109641838
NCBI-ProteinID:
XP_019961966
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MSYAEDEGMNAEVFKSVHPWSKIPACWNPTDSAAAAWIFPSLLPVQNTSRPSCEKMSSAE
PDPSLDPEQLEAQMDFFLKLGYSTAQVRSVQQKFGPSIDTDKVLGELMKMDQEPKQVPVT
MMSVVLPRGDPQAAGPTLQLPVAVSTPRTREESSEDEDALRPIVIDGSNVAMSHGNKEVF
SCLGIQLAVNFFLDRGHTNVTVFVPLWRKEQPRPDVPITDQHILLDLERRKLLVFTPSRR
VAGKRVVCNDDCFIVKLGYESDGIIVSNDMYRDLQGEKPEWKRFIEERLLMYSFVNNKFM
PPDDPLGRYGPTLENFLRKFPKTQKKLLCPYGKKCTYGIKCKFHHPERAKQSNRLVADEL
RENAKHPSAAQKQSSACSIPVPGQSLLLVEDMAKKLSLGHEIGSLKKDHKNEHVAQVKTG
HRSSKKPTCRKERGSFHSSSDHGSVRESQLDSGLGSIDSQPMEAPWITDCQYGATYRGCQ
HFHSVQQQHGPQAPCSCCSHGPPSQGSAPPFHHHSHHHSIGPVSSHSSDTSPYGPPHYHG
YPAYPVSMPAAYSQPADFQHGRVHNRQQQTYWSDPFGGHPSLVRHLPAECSQWEPPQATQ
PSREEREVVRKKLLAIFSAHLVDTAMEMFPQSMDPQMLVAEILRLQSQNRPLR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgccgaggacgaagggatgaatgctgaagtttttaaatctgtgcacccgtgg
agtaaaatcccagcctgttggaaccccacagactctgccgctgctgcatggatcttcccc
tcactcctccctgtgcaaaacacctcccgtccgtcctgtgagaaaatgtcctctgctgaa
cccgacccatccctggaccccgagcagctggaggcccagatggacttcttcctcaagctg
ggatactccacggctcaggttcggtccgttcagcagaagtttggccccagcatagacaca
gataaagttctgggggagctgatgaagatggatcaggagcccaaacaggtgccggtgacc
atgatgtcggtggtgctgcccagaggggacccccaggctgcgggccccacgctgcagctg
cctgtcgccgtgtcgactcctcggaccagagaggagagcagcgaggatgaagatgccctg
agacccatcgttatagacggcagcaatgtggccatgagccacgggaacaaggaagtcttc
tcgtgtctgggaatccagttggctgtgaatttcttcttggacagaggtcacaccaatgtc
acagtgtttgttcccttgtggaggaaggagcagccgcggccagatgttcccattacagat
cagcacattctgctcgacctggagaggaggaagctcctggtgttcacgccgtcgcggcgc
gtcgcaggcaagcgagtggtctgtaatgacgactgcttcatcgtcaagctgggctacgag
tctgacggcatcatcgtgtccaacgacatgtatcgggaccttcagggggagaaaccggag
tggaagcgcttcatcgaggagaggctgctcatgtactccttcgttaataacaagtttatg
cctcctgatgatcctctaggccgctatggaccaactctggagaacttcctgcggaagttt
ccaaagacgcagaaaaaactcctgtgcccttatggaaagaaatgcacttacggaatcaaa
tgtaaattccaccatcctgagcgagccaaacagtccaatcgcttggtcgccgatgagctt
cgggagaacgctaagcacccttcagctgctcagaaacagtcctcagcttgttccattcct
gtcccgggacagagcctcttgttggtggaggacatggccaagaaactgagtctgggacac
gaaatcggctcattgaagaaagatcataaaaacgaacatgtagctcaggtgaagacgggt
caccgctccagcaagaagccgacgtgcagaaaggaaagaggcagcttccactcctcctcg
gaccacggctcagtgcgtgaatctcagctggactctggtttgggctccattgacagtcag
ccaatggaggctccctggattactgattgccagtatggggcgacgtacaggggctgccag
catttccacagtgtccaacagcagcacggccctcaagcaccatgcagctgctgctcacac
ggtcctccctctcaggggagtgcaccacctttccaccaccacagccaccatcatagcatc
gggcccgtcagcagccacagctctgatacgtccccctacggcccacctcattaccatggc
tacccagcgtacccggtcagcatgcctgctgcatacagtcagccggctgatttccagcac
ggcagagtccacaaccgacagcagcagacgtactggtccgatccatttgggggtcatcct
tcgttggtccgccacctgccggcggagtgctcccagtgggagccccctcaggcaacccaa
cccagcagagaggagcgagaggttgttcgcaagaagctcctcgccatcttcagcgcccac
ttggtggacacggccatggaaatgttccctcagtcgatggatccacagatgcttgtcgct
gagatcctcaggctgcagagtcagaaccggccactgagatga
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