Paralichthys olivaceus (Japanese flounder): 109642034
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Entry
109642034 CDS
T06037
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109642034 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109642034 (lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
109642034
NCBI-ProteinID:
XP_019962227
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MTQLQLALLLVLQVYTCAQEGVAPVGGDLDAVSLPELSDICTEGSCYPATGDLLIGRAHQ
LSSTSTCGLKRPEPFCIVSHLQEEKKCFVCDSAALYDELMDQTHNHRIENVVTTFAPNRL
KTWWQSENGQENVTVQLNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAY
DCETSFPAISQGPMQKVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRINDPYSPRIQNML
KITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPIHSDGQ
TRDGMVHGHCRCNHNTKGLNCEQCQDFYHDFPWKPAEGRNTNACKKCNCNQHSDSCHFDM
AVFVASGNVSGGVCDDCQHNTAGHNCEQCKPFYYQHPERDVRDPNICQPCSCDPLGSLNG
GSCDQKTDVRTGLIAGQCRCKVNVEGERCERCKQAHYGLSDTSEGCSACTCSPVGTVPGG
NPCDSETGTCFCKRLVIGRDCDQCVVRKQSYHVTQGQGLIKHDIEVSECDQMRIKMKLCD
QVTGQCICRDHMFGRRCDQVESGFYFIALDHYTYEAEDAIFGPGVTVVPRPHPQDRSPTW
TGIGLVNVPEGAFLEFAVENIPDSMEYDIIIRYEPQLPDQWEEVLMTVMRPGPIRADSRC
INTVPDDDNQMMSLHPGSRYVVLPRPVCFESHLNYTVRLSLPLYSALSDIQSPYTLIDSI
VLMPHCKNLDIFTASEGGDSSGNSGWDIFQRYRCLENSQSVVKTPITDICRNFIFSISAM
LHQGAKECQCDLQGSLSTVCEPSGGQCQCRPNVVGRNCDACAPATFQFGPNGCRECACDR
QGSQNPFCDQLSGQCVCVAGAYGRQCDRCLPGHWGFPTCRTCPCNGHADDCDPNTGYCIS
CRDHSTGHSCDRCLDGFYGDPMLGSGDHCRPCMCPDGPGSRRQFAGSCYRSDDSQQAICV
CNTGYRGARCDECSPGYYGNPGEGGGQCQPCQCNNNIDMLDPESCNGQTGECLRCLYHSE
GTACQSCKLGYYGNALLQDCRKCVCNKLGSNISSCASGDCHCDSSSGQCHCLLNVIGQHC
DRCALDTWNMASGSGCQLCDCEPKHSYGTSCNEISGQCSCRPGFGGRTCSECQQLFWGDP
EVQCHACDCDPRGVSEHQCNKVSGHCVCVEGVSGPRCDTCARGFSGIFPDCRRCHRCFAE
WDNVIGQVTNQTHRLVNKVNALKASGVSGPYKKSIDNIERSAADIWVVLNQNPASQPLTE
IQHLLQQASDLMRALSQMLSHTEETLVQAEEGDSAAQSKLDSVTLDAQKLERTVQELLDQ
VEFIKNSDIRGATDSITKYFLLSEAAEARANSSTIDAGSSVETSAAVRQLTEDKLNQTRE
EFLRRHTERAQKLDDLAGELQTLDLSEISQKTCGSPSADQDLCTSCGGEGCDGVVMTANS
AWRKTQESEHEIISAMGEVEKLSKMVSEVKLKADEAKLSAQEVLMKTNRTKQKVDQSNDE
LRSLIRQIRDFLTQDAADLESIELVANEVLAMQMPTTPVQLQNLTEEIRQKVGELGHVET
ILQQSTDNIQRAENLLDQARHASVEAADVKDSAEKMKKALEEARRAQDAASSAIQQAAAD
IQNTNNLLSLVQFETTEADLKLNNATKRLQRLEQDVTLLIDKAVNVTKSSEQTNQDAERI
TEIAEEVKKDLESDLKDKYATVGQLIDQKAGGVANAKKRAESLQQEAKQLLLQASDKLQL
LKELEKSYNENQQTLEVKAELLVELEAAVKELLQEISHKVTVYSTCLF
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcttcagctcgcgctgcttctcgttctgcaggtgtacacctgtgctcaagag
ggcgtggcccctgtaggtggagacctggatgctgtcagcctcccggagctcagtgacatt
tgcactgaaggcagctgttacccagcaacaggagaccttctgattggccgagctcaccaa
ctgtcttccacctctacttgtggtctgaagcgacccgaaccattctgcatcgtcagccac
ctgcaggaggagaagaagtgttttgtctgcgactcagcggcactctacgacgagttgatg
gatcagacacacaaccatcgcatcgagaatgtcgtgactacgtttgctccaaacagactg
aagacatggtggcagtctgaaaatggtcaggagaacgtcaccgttcagctgaatctggag
gcggagtttcacttcactcatctcatcatgaccttcaagacatttcgtcctgctgccatg
gtgattgagcgatcagcggactttgggaagacgtggcaggtttatcgttacttcgcttat
gattgcgaaacatcttttcccgccatttcccagggtccaatgcagaaggttgatgatgtc
atctgtgactcacgttactctgacattgagccgtccactgagggagaggtgattttcaga
gttctggatccggcgttcaggatcaacgacccttacagccctagaatccaaaatatgtta
aagatcactaacctacgagtgaagttcaccaaactgcacacacttggagacaatttactc
gactctcgtatggagatcaaagagaagtattactacgccatctacgacatggttgtccga
ggaaactgcttctgctatggacacgcctctgaatgtgcccccatccacagtgatggacag
acccgggatggcatggttcatggtcactgcaggtgcaaccacaacactaaaggtctgaac
tgtgaacagtgtcaggatttctatcatgattttccctggaaaccagcagagggccgtaac
acaaacgcctgcaagaagtgtaactgtaaccagcactctgactcatgccacttcgacatg
gccgtattcgtggcttcaggaaatgtcagcgggggtgtctgtgacgactgtcagcacaac
acagcaggacacaactgtgagcagtgtaaaccgttctactaccaacatccagagagagat
gtgagggaccccaacatctgccagccttgtagctgtgaccctctgggttctttgaatgga
ggatcatgtgaccagaagacggatgttagaaccggtctgattgctggtcagtgtcgctgt
aaagtcaatgtggagggagaacgctgcgagcgctgcaaacaggctcactacggactgagt
gacacatctgaaggatgttcagcatgtacttgtagccctgtgggaacagttccaggagga
aatccctgtgacagtgaaacaggaacttgtttctgtaaacgtctggtgattggacgagac
tgtgaccagtgtgtggtgagaaaacaaagttatcatgttacacagggtcagggtctaata
aaacatgatattgaagtatctgagtgtgatcagatgagaatcaaaatgaagctgtgtgat
caggtgactggtcagtgcatctgcagagatcacatgtttggtcgtcgctgcgatcaggtc
gagtctggattttacttcattgctctggatcactacacctatgaggcagaggatgccatt
tttggacctggagtgacagtggtgccgaggccccaccctcaggaccgcagtcccacctgg
acaggtattggcctagtcaatgtcccagaaggggccttcctggaatttgcagtggagaac
atccctgactccatggagtatgacatcatcatccgctatgaaccacagctgcccgaccaa
tgggaggaggttctgatgactgtgatgaggcctgggccaatcagagcagacagccgctgt
attaataccgtacctgatgatgacaaccagatgatgtcactccaccctggctcacggtat
gtggttcttccaagaccagtttgttttgaatctcatctgaactacaccgtccgcctcagt
ctgcctctgtactcagccctcagtgacatccagtctccgtacacacttattgactcgatc
gtgttgatgccgcactgtaaaaacctggatatcttcacagcctcagagggaggagactcc
agtgggaacagcggatgggatattttccagcgttatcgttgtttagagaatagccagagc
gttgtcaagacaccaatcacagatatctgcagaaacttcatcttcagcatctctgccatg
ttgcaccagggagctaaagaatgtcagtgtgaccttcagggctccctcagtaccgtgtgt
gaacccagtggaggtcaatgtcagtgtcgccccaatgtggtcggaagaaattgtgacgcg
tgtgctccggccacattccagttcggacccaatggctgcagagaatgtgcatgtgaccgt
caaggttcacaaaatccattttgtgaccagctcagcggacagtgtgtctgtgttgccggt
gcatatggtcgccagtgtgatcgctgtctgccaggtcactgggggtttcctacctgtcga
acctgcccatgcaatggacatgctgacgactgcgaccccaacactggatattgcatcagc
tgcagggaccacagcactggacacagctgtgacaggtgtctagacggtttctatggtgac
cccatgttggggtcaggtgaccactgtcgtccctgcatgtgtcccgatggccccggcagc
cggcggcagtttgcaggaagctgttaccgaagtgacgactcacagcaggcgatctgtgtc
tgcaacactggatatagaggtgctcgctgtgatgagtgctcacctggttactatggaaac
cctggtgagggggggggtcagtgtcaaccatgtcagtgcaacaacaatatcgacatgttg
gacccagagtcttgcaacggtcaaaccggcgagtgtctacgctgcctgtaccacagcgag
ggcaccgcctgccagagctgtaaactgggttactacggcaacgcactgctgcaggactgt
agaaagtgcgtttgtaacaagctcggcagcaacatctccagctgtgcgtccggtgactgt
cactgtgacagcagcagtggtcagtgtcactgtctcttgaacgtgattggtcaacactgt
gaccgctgtgctctggacacctggaacatggcgagtggcagcggctgtcagctctgcgac
tgtgaacccaaacactcgtacgggacgtcctgcaacgagatcagtggtcagtgctcctgt
cgccccggcttcggcggaagaacctgcagcgagtgtcaacagctgttctggggagatcca
gaggtccaatgtcacgcctgtgactgcgaccctcggggcgtctctgaacatcagtgtaac
aaagtcagtggtcactgcgtctgtgtggagggcgtgtctggaccacgttgtgacacgtgc
gcacgtggattctcaggaatattccccgactgtcgccgctgccaccgttgctttgcagaa
tgggacaatgtcatcggtcaggtgaccaatcagacgcaccgccttgttaacaaggtcaat
gccctcaaagccagtggagtgagcggaccgtacaagaagtccatcgacaacatcgagagg
agcgccgcggacatctgggtcgtgttgaaccagaacccagcttcacaaccgctcactgag
atccagcacctgcttcaacaggccagtgacctgatgagggccctgagccagatgttgagc
cacacagaagagactctggtccaggcagaggaaggggactcggctgcacaatctaaactg
gactctgtgacattagatgctcagaaactggagcgcactgttcaggagcttctggatcaa
gttgagttcatcaaaaactctgacatcagaggggcgacagacagcatcactaagtacttc
ctgctgtctgaggcagctgaagctcgagccaactcctccaccatcgatgctggaagctct
gtggaaacctctgccgctgtacggcagctcacagaggacaaactgaaccaaaccagagag
gagttcctgaggagacacactgagcgtgctcagaaactggacgacctggctggagagctg
cagactctggacctatcagagatcagccagaagacctgtggcagtccatcagcggatcag
gatttgtgcaccagctgtggaggtgaaggatgtgacggcgtggtgatgacggccaacagt
gcgtggaggaaaactcaagagtcagagcatgaaatcatcagtgccatgggggaagtggaa
aaactgtctaagatggtgtcagaggtcaagctgaaggcagatgaagcaaaactgagtgct
caggaagttctgatgaagaccaacagaaccaaacagaaagtggaccagagtaacgatgag
ctgagaagtctcatcagacagatcagagactttttaacacaggatgccgcagatttagag
agcatcgagctggtggctaacgaggttctggccatgcagatgccaactacgccggtacag
ctacaaaacctcacagaagagatccgacagaaggtgggagaactgggacatgtggagacc
attctgcagcagagtactgacaacatccagagagctgagaacctgctggaccaggcccgt
cacgccagtgtggaggcagctgatgtgaaggactctgcagagaaaatgaagaaagctctg
gaagaagctcggagagctcaagacgcagccagcagcgctatccagcaggcggccgccgac
atccagaataccaacaacctactgtctttagtgcagtttgagacaacagaagcagacctg
aagctaaacaacgccaccaagaggctgcagaggcttgagcaggatgtaacattactaata
gacaaagctgtaaatgtcactaagagctctgaacagaccaatcaggatgcagaaagaatc
acagagatagcagaggaggtgaagaaagacctggagtccgacctgaaggataagtatgcc
acagtggggcagctgattgatcagaaggcagggggtgtggctaatgccaagaagagggcg
gagtcactgcaacaggaagccaaacagctgttgttgcaggccagcgacaagctgcagctg
ctgaaagagctggagaagtcgtacaatgaaaaccaacaaactctggaggtgaaggctgag
ctgctggtggaactggaggctgctgttaaagagctgcttcaagagatcagccacaaggtc
acggtctacagtacctgtctgttctag
DBGET
integrated database retrieval system
