Paralichthys olivaceus (Japanese flounder): 109642049
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Entry
109642049 CDS
T06037
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109642049
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109642049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
109642049
NCBI-ProteinID:
XP_019962247
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MGLKDHLEDGTGHILSLELDLDYLHVEGAERQGSLSTATDAGNVGISQVRADSSHNNSIG
SSGTSFSTHSSYSSSSSCSNFSEESAVSDSEDERIQNRSEFQNPHRDQPHLHHQESSTAC
QPVRLDLTQPETSAPTDPVTDCRTKVEFALKLGYSEELVLLVLRKLGTHALINDVLGELV
KLGTKTEMEQHGGVTVSQSPSTSLSSSLASSSTSSSSSFSSSLDSCRLLCPSQLLEDKEN
LRPVVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDALIT
DQEILRQLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKP
EWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKRPVIHRKQPCPYGKKCTYGH
KCKFYHPERGSQPQRAVADELRASAKISSVTSRGLLEDTLMIKSQSPGQGHRMAEAEPSQ
GTPKKRPNPSPRSSFSDLLEDRLRVQSKVEGRRGSSSSSSSNCSSNFLGYPAPGAPTSLG
NLDKWEYPGGSGGGSSRFAGASGPSQPDTYHRCESPEVGYSSLAKAYSGLNLVVPQSLEC
FFPADLRAGSMLSDCSSEGSVSSDSFSPDPLLDDGPKCHHHHHHPHHHHHCSGQYPHPTS
RVPPGLGQRAPHGYPVPLALQRQHGFGLEDPSPSVTCHASPHPFKSPSAYVAPHLRHPSL
SSFPGELPASPRCPPQTSPAHPHSQSSSLGRNLMGSLWQDGGFPDSRVYEGSPLHSRRNY
TSLNQQPLPHINWEPQYQQSPKPCYDLFTLQSRGREAHSSPRGLSSSSLPPLPQLSLTSI
SPHKSHLPPLPQHQEPPNLGRYQDLRERMFVNLCGIFPPDLVRMVMTRNPHVMDAQELAA
AILMEKSQI
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgggacaggccacatcctcagcctggagctggat
ctggactacctacatgtggaaggtgctgagcgtcaggggagtctgagcaccgcaaccgat
gcagggaatgtaggaatctcgcaggtcagagctgattcctcacataacaacagtataggt
agtagtggtactagttttagtactcactcaagctatagcagcagcagtagttgcagtaat
ttctcagaggagagtgcagtatccgacagtgaagatgagcgaatccagaatcggtccgaa
tttcaaaatcctcatcgagatcagcctcacctacaccaccaagagtcctccactgcctgt
cagccggtcaggctggacctgacacagccagaaacatcagctccgaccgaccccgtcact
gactgccgcaccaaggtggagtttgctctcaagctcggttactccgaggagcttgtgctg
ctggtgctgaggaaactgggcacacacgcactcattaatgacgtcctgggagagctggtc
aaactgggaaccaagacagagatggagcagcacggaggtgtgactgtctcccagtctccc
tccacatctttatcatcctctttggcctcctcctccacctcctcctcctcctcctttagc
tcctctctggactcatgtcggctgctgtgtccgtcccagctgctggaggacaaagaaaac
cttcggcctgttgtggtggacgggagcaatgtagccatgagtcacggaaataaggaagtg
ttctcgtgtcaaggcatccagctggctgtggattggttcttagaacgaggtcaccgtgac
atcactgtttttgttcctgcctggagaaaagagcagtcacggcccgacgctctcatcaca
gaccaggagatcttgaggcaactagagaaagagaagatcctggttttcactccatctcga
cgtgtgcaggggcgtcgtgtggtttgctatgacgaccgcttcatcgtcaaactggcctac
gagtccgatggcatcattgtctctaacgacaactaccgcgaccttgccaatgagaagcca
gagtggaagaaattcatcgatgagcgtctgctgatgtactcctttgtcaatgacaaattc
atgccaccagatgacccactaggacgtcatggacccagtctggacaactttctaaggaag
aggcctgttattcacaggaagcagccgtgcccttatgggaagaagtgcacatatggtcac
aagtgcaagttttaccatcctgaaaggggcagccagccccagcgtgctgtggctgatgag
ctccgagccagtgccaaaatttcatcagtgacttccagaggcctgctggaagacaccctg
atgataaagagccaaagtcctggtcaaggtcacagaatggctgaggccgagccaagtcag
ggcactccaaagaaacggccaaaccccagcccacgaagctcgttcagtgacctcctggag
gatcggcttcgggtccagtccaaagtggaaggacggaggggcagcagcagcagcagcagc
agtaattgtagcagcaactttttagggtatcctgctccaggagcacctacttcattagga
aacctggacaaatgggaataccctgggggtagcggtggaggcagttccaggtttgctggg
gcctcgggaccaagtcagcccgacacttaccacagatgtgagtctccggaggtgggctac
agctcactggcaaaggcatattcaggcctcaatctggttgtgccacaaagtcttgaatgc
ttcttcccagctgatctgcgagcaggatcgatgctgtcagattgtagcagcgaaggcagc
gtcagctcggactctttctcccctgaccccttattagatgacggccccaagtgccaccat
caccaccaccatcctcatcaccatcatcactgctctggccagtacccccatcctacaagt
cgtgtcccacctggattgggccaacgtgctcctcatggctatcccgttcctttagctttg
caaagacaacatggttttggtttggaagacccttcaccttctgttacttgtcacgcatct
ccacatcctttcaaaagcccttcagcctatgttgcaccccaccttcggcatccgtcactg
agcagttttccaggggaattgccagctagtccacgatgcccaccccaaacatctcctgct
cacccccattctcagagctcctcgcttggcagaaatctgatgggctccctttggcaggat
ggtggtttcccggactcccgagtgtatgaagggtcaccacttcattccagaagaaactac
acttccctaaaccaacaaccactgccgcacataaactgggagccccaataccagcagtcg
cctaagccatgctatgatctgttcaccttgcagagcagggggagggaagctcattcatcg
ccccgcggcctctcgtcatcaagtcttccaccgctcccgcagttgtccctcacgtccatc
tctccccacaaaagccacctgcccccactgccccagcaccaggagccccccaacctgggt
cgataccaggacctgagagagaggatgtttgttaacttgtgtggcatcttccctccagat
ttagtgagaatggtgatgaccagaaaccctcatgtgatggatgctcaggagctcgcagct
gcaattttgatggagaaatcgcaaatttag
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