Paralichthys olivaceus (Japanese flounder): 109642261
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Entry
109642261 CDS
T06037
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
pov05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109642261
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109642261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109642261
Spliceosome [BR:
pov03041
]
Common components
Common spliceosomal components
SR proteins
109642261
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
CoV_nucleocap
Nup35_RRM_2
CDC45
OB_RNB
Motif
Other DBs
NCBI-GeneID:
109642261
NCBI-ProteinID:
XP_019962520
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGRFSSGSSGGGGGGGGYRPSRSSGSRYGPPVRTDHR
LIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKNAISKLDGTEL
NGRKLKIFEDSRSRSKSRSRSRSYSRSKSRSRSRNRSRSRSRSLSRTPEKKSSGGSKGAA
RSPSRSKSRSKSRSRSRSRSPAPAQNKQSRSRSRSRSRSRSRSRSRSASADSKH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgtcgtgtcttcatcggccgtttgagcccacatgccagagagagagacgtg
gagaagtttttcaagggatatggacggattcgggagatcaacttgaagaatggatttggc
ttcgtggaattcgacgaccatagagatgcagatgatgctgtgtacgagttgaatggaaag
gagttgtgcagtgaaagggtcactatcgagcatgctcgctccagacgaggaagaggtggc
ggccctggaatgggacgtttcagtagcggcagcagtgggggtggcggcggtggcggcggc
tatcgtccatctcgcagcagtggatccaggtacggccctcctgtgcggacggaccacagg
ctcattgtagagaacctctcttcacggattagctggcaggacctgaaagacctgatgaga
aaagcaggtgaagttacctttgtggacgctcacaggcccaacaaaaacgaaggggtggtt
gagtttgcatctcgcagtgacatgaagaacgccatttccaagctcgatgggacagaactg
aacggacgcaaactgaagatatttgaggacagcagaagtcgcagcaagagccgttcccgc
tcccgcagctactctcgttccaagagtcgctcccgcagccgcaaccgctccaggagccgc
tccaggtctctcagccgcaccccagagaagaagtcgtcaggtggaagcaagggcgcagcc
agatccccctccaggtccaagtctcgctccaagtcccgctccaggtctcgctcgcgctca
ccagccccggctcagaacaaacagtctcgctcccgttctcgctctcgttctcggtcccgc
tctcgttcacgttctcgctccgcctcagcagacagcaaacactga
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