Paralichthys olivaceus (Japanese flounder): 109642482
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Entry
109642482 CDS
T06037
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109642482 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109642482 (exosc1)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109642482 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109642482 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
SPK
Motif
Other DBs
NCBI-GeneID:
109642482
NCBI-ProteinID:
XP_019962850
LinkDB
All DBs
Position
Unknown
AA seq
196 aa
AA seq
DB search
HHLSSSSSLFSGDKLCSVEDCFPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRET
EALLLPDVGAIVTCKVTSINPRFAKVQILYVGSTPLKDRFRGTIRKEDVRATEKDKVETY
KSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTHT
KEFRKVARVQPEYLQA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
caccacctgtcttcctcttcttctttgttctcaggtgacaaactatgcagtgtagaagac
tgttttccaggcacaggagtatatttgcggcacggctacatatactcctcactagcaggc
tacgtgctcaggaaaaacgagggagaggagttacccgtgatctcagttgtgagggaaaca
gaagcactactgctgccagatgtaggagcaatagtcacctgtaaggtgaccagcatcaac
cccaggttcgccaaggtccagatcctctatgtgggctccacgccactgaaggatcgcttc
agagggactatcagaaaagaagatgtgcgtgcaacagagaaggacaaggtggagacatac
aaaagcttcagacctggtgacatcgtcctggcaaaagtgatttctttgggcgacgttcag
tcgaactacctgttgacaactgctgagaatgagctgggagtcgtggtggcacacagtgaa
gcaggtgcccagatggttcccatcagctggtgcgagatgcagtgcccgcggacacacacc
aaagagttccgcaaagtggcacgagtgcagccggagtacttacaggcgtga
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integrated database retrieval system
