Paralichthys olivaceus (Japanese flounder): 109642681
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Entry
109642681 CDS
T06037
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109642681 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109642681 (dis3)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
109642681 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
Dis3l2_C_term
Toxin_R_bind_C
Motif
Other DBs
NCBI-GeneID:
109642681
NCBI-ProteinID:
XP_019963129
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MLKSKTFVRKTRSGGVVKIVREHYLRDDIWCGSEACTECKQESTELQTDACVESNLCPYP
HYLIPDTNVVLHQIDVLEDPVIRNVIVLQTVLQEVRHRSAPIYKRLKDIIHDKEKHVYTF
TNEHHRETFIEREPGESANDRNDRAIRVAAKWYSQHLKKFESDTDGLKVVLLTNDEDNKR
KAEESGLLVYKFEEYIKSLIANPELVDRLALSNDDKNEITNSRVLFPEHLPLSKIQAGIK
NGSFLQGTFRASRDNYLEATVFVQGEGEDSTEVLLQGLQHLNRAVYQDVVAVQLLPRNQW
VAPSSVVLQDDGAAKDDDVEEEEEDKALRISVAEAARKPTGKVVGIIKRNWRPFCGMLNV
SQIKESTRHLFTPADRRIPRIRIETRQASTLAGQRIMVAIDGWPKDSRYPNGHFVRSLGS
AGEKDTEQAVLLLEHDVPHQAFSQAVLSFLPKMPWAITPEEMGKREDLRHLTVCSVDPPG
CTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNAMDKEAANRGTTVYLCGKRIDMVPE
LLSSNLCSLRSNVERLAFSCIWEMNHKAEILKTRFTKSVINSKASLTYAEAQMRIDDANK
NDDTTKSLRGLNKLAKILKKQRIEKGALTLSSLEVRFHIDSETHDPIDLQTKELMETNSM
VEEFMLLANISVAQKIFDEFSECALLRKHPAPPPSNYDVLLKAAKSMNVEIHTDSAKALA
DSLDVAKVDSFPYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRY
ADIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMSQYAQRASVAFHTQLFFKS
RGILNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDGKNKTVPNLVFDEEGPSLTIEQHTFH
IFDKVKVTISLDDSNIQHQKIRMSLIDPVIPGVSVPAPDVEPQAKKPKQEQ
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtctaaaaccttcgtgaggaagacgaggtcgggcggcgtggtgaagatcgtg
cgggagcactatctgcgggacgatatttggtgcgggagcgaagcttgtactgaatgcaaa
caggagtccacggagctgcagacagacgcgtgtgtagagagcaacctgtgcccgtatcca
cattatctgatccctgacacgaacgtggtgctgcaccagattgacgtgttggaggatcct
gtgattcgcaatgtgatcgtccttcagactgtgctgcaggaggttcgacaccgcagtgca
ccgatctataaacgcctgaaggacatcatacacgacaaagagaaacacgtctacacattt
accaacgaacaccacagagaaacatttattgaaagggaaccgggggagagcgccaacgac
cgtaacgaccgtgcaatccgcgtggcagccaagtggtacagccagcacttgaagaagttt
gagtctgacacagatgggctcaaggtggtcctcctcaccaatgacgaagacaacaagcgg
aaggcagaggagagcggcctgctggtgtacaaatttgaagagtacatcaagagtctgata
gcaaaccctgagcttgtggatcgtctagcattgtccaatgatgacaagaatgaaatcact
aacagtagggtgttattccctgagcacctccctctgtcaaagatccaagcaggaattaag
aatggctccttcctccaaggcaccttcagagccagcagagacaactacctggaggccaca
gtctttgtccagggagaaggggaagatagcacagaggttctccttcagggtcttcagcac
ctcaacagagcagtgtaccaggatgtggttgctgtgcagctgctgccacgaaatcagtgg
gtggcgccctcgtcagtcgtgctacaggatgatggtgctgcaaaggatgatgatgttgaa
gaagaggaggaggacaaagctttgaggatatctgtcgctgaagcagccaggaaacccaca
ggcaaagtagtgggcatcatcaaaaggaactggaggccgttctgtggcatgcttaatgtc
tcccaaattaaagagtcaacccgtcaccttttcaccccagcagaccgccgtatcccacgt
attcgcattgaaacgcgccaggcgtccactctggcaggccaaaggatcatggtggccatc
gatggctggcccaaagactccagatatccaaatggtcactttgtgcgcagcctgggcagt
gcaggagaaaaggacacagagcaggcggtgttgctactggagcacgatgtcccccaccag
gccttctctcaggctgtgctcagtttccttcccaagatgccgtgggccatcacaccagag
gaaatgggaaagagggaggacctgaggcatctgacggtgtgcagcgtggatcctccagga
tgtacagatatcgacgatgccctgcattgcagagagctggaaaacggaaaccttgaggtg
ggggtccacatcgctgatgtcagtcacttcatcagacctggtaacgctatggacaaagag
gccgccaaccgtggaaccactgtctacctgtgtgggaagaggatagacatggtccctgag
ctgctcagctccaatctttgttcactgcgctccaacgtggagaggctcgctttctcgtgt
atctgggagatgaaccacaaggctgaaattctgaagacgcggttcacaaaaagtgtcatt
aactccaaggcatctctgacctacgctgaggcccagatgagaatcgatgacgccaacaag
aatgacgatacaaccaagagtcttcggggtctcaacaaactcgccaaaatcctcaagaag
cagaggatagagaaaggggcattgacgctgtcgtccttggaggttcgtttccacatcgac
agtgaaacccacgaccccattgacctccagaccaaagaactcatggagacgaactccatg
gtggaggagttcatgttgctggcaaacatttcagtcgcccagaagattttcgatgaattt
tcagagtgcgctctgctgaggaaacatcctgcgccgcctccgtccaactacgacgtcctg
ctcaaggctgcaaagtccatgaatgtggagatccacacggactcagccaaggcgctggct
gactcccttgacgtggccaaagtggacagcttcccatacttcaacacgctgctgcgcatc
ttggccactcgctgcatgatgcaggccgtctatttctgttctggcatggacagcgacttc
caccactacggccttgcttcgcccatttatacacacttcacatcacctattagaagatac
gcagatataatagttcaccgcctgctggcagtggccataggagcagatagcacctaccca
gatttaatggacaaacataagcagtcagccctctgcaacaacctcaactacagacacaag
atgtctcagtatgctcagagggcgtctgtggccttccacacacagttgttcttcaagagt
cgaggcattcttaacgaagagggattcgttctgtttgtgaggaaaaacgcgatcattgtt
ctcatccctaagtttggtctggaaggaacagttttctttgatggcaaaaacaaaaccgtc
ccgaaccttgtttttgatgaagagggcccctctctgaccatagagcagcacaccttccac
atatttgacaaggtgaaggtcactatcagcctggacgactccaatattcagcaccagaag
atccgcatgtctctgatcgaccctgtgatccctggtgtgagtgttccagccccagatgtt
gaaccacaggccaagaaaccaaaacaggaacagtga
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integrated database retrieval system
