Paralichthys olivaceus (Japanese flounder): 109642782
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Entry
109642782 CDS
T06037
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04145
Phagosome
pov04814
Motor proteins
pov05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109642782
09142 Cell motility
04814 Motor proteins
109642782
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109642782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pov03036
]
109642782
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pov04812
]
109642782
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
109642782
Cytoskeleton proteins [BR:
pov04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109642782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Nbas_N
Motif
Other DBs
NCBI-GeneID:
109642782
NCBI-ProteinID:
XP_019963263
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MSDKSELKAELERKKQRIAQIREEKKRKEEEKKKKDGDSKRGAEAGGGSSGSHEDSDLER
KRREAEALLQSVGITPDIPHAQPLRVVTEDTCLFHYLVPAPMSPSNKSVGSDAGSQDSGD
GNAGPRTLHWDPDPSTLQLHSDSELMGRGAVRLGMSKVTQVEFVPKEMVSYSKETQTPTE
ALSHVDQKADEEEDEEITAPAPVEDTNEDKDEQGEQQDEETPKELTEEEKLQVMHSEEFL
SFFERGSRIVERALAEQVDVCFDYSGRDLEDKEGDLQAGAKLVLNRQFADEHWTKNRVVT
CLDWSPQYPELLLASYNNNEDAPHEPDGVALVWNMKYKKGTPEYIFHCQSEVMSAGFAKF
HPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVGTQNANNLISIST
DGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMAFPLGDVNNFVVGSEDGSVYTACRHG
SKAGITEVFEGHHGPVTGLSCHSAGGPVDFSHLFISSSFDWTVKLWSTKSTRPLYSFEDS
CDYVYDAMWSPTHPALFACVDLAGRLDLWNLNNDTEVPTASVCVEGSPALNRVRWAHTGK
EIATGDSDGQVQVYDVGEQICVPKADEWTRFVRTLAEINENRDEAEELANV
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaagagtgagctgaaggctgagctggagaggaagaaacaacggatcgcccag
attcgagaggagaaaaagagaaaagaggaggagaagaaaaagaaggatggagattcaaag
cgtggagcggaggcaggaggtggttcctcgggcagccatgaagattctgacctggagagg
aagaggagggaggcggaggcgctcctgcagagtgttggcatcactcctgacataccccat
gctcagcccctgagggtagtaacagaagatacatgtctgtttcactacctagtccctgcc
cccatgtctccctccaacaaatcagtgggcagtgacgcaggaagccaagattctggggac
ggaaacgcaggaccaaggacattgcattgggatcctgacccctctactctgcaactgcac
tccgactctgagctgatgggacgtggcgctgtgaggctgggcatgtccaaagtgacccag
gtggaatttgtcccgaaggaaatggtttcttactccaaagaaacgcagacacccaccgag
gcactgtcacacgttgatcaaaaagcagatgaggaagaggatgaggagatcactgctcct
gctccagtggaagacaccaacgaagacaaagatgaacagggagaacagcaggatgaggaa
actcccaaggagctgactgaagaagagaagctgcaggtcatgcactccgaggagttcttg
tcgtttttcgaacgaggcagcagaattgttgagagagctctggctgagcaggtggacgtc
tgcttcgactacagtggcagagatctggaggataaggagggtgacttgcaggcgggagca
aagctggttctgaacagacagtttgcagatgagcactggactaaaaacagagtggtcacc
tgtcttgactggtcccctcagtacccagaactgctcctggcctcatacaacaacaatgag
gatgctcctcatgagcctgatggagtggcactggtctggaacatgaagtacaagaagggc
acacccgagtacatcttccactgccagtcagaggtgatgtcagctgggtttgcaaagttt
caccccaacctggtggtgggtgggacatattcgggacagattgtcctgtgggacaacagg
agcaacaagcgcacccctgttcagagaacccccctgtctgcagctgctcatacacaccca
gtctactgtgtgaacgtggtaggaacccagaacgccaacaacctgatcagcatttccact
gatggaaaaatgtgctcttggagccttgacatgctctcacagccgcaggacagtctggag
ctggtgttcaaacagagcaaggcagtggctgttacctccatggccttccctctgggagac
gtgaacaactttgtggtgggcagtgaggacggctccgtttacaccgcctgtcgacacgga
agtaaggcaggtatcactgaggtgttcgaaggccaccatggtccagtgactgggctgagc
tgtcacagcgctggtggacctgttgacttctctcatctcttcatctcctcctcttttgat
tggaccgtcaaactctggagcaccaagagtacccgtccactgtactcatttgaggacagt
tgtgactacgtctatgatgcaatgtggtctccaacccaccctgctctgtttgcttgcgtg
gacctagccggacgtctggacctgtggaacctcaacaatgacactgaagttcccactgcc
agtgtgtgtgtggaggggtctccagcactgaaccgtgtgagatgggctcacactggaaaa
gagatcgccactggggactcagacggacaggtgcaggtctacgacgtaggggagcaaatc
tgcgtgccaaaggctgacgagtggacgcgcttcgtcaggacgctggctgagatcaatgag
aaccgagatgaagctgaggaactggccaatgtctga
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integrated database retrieval system
