Paralichthys olivaceus (Japanese flounder): 109642801
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Entry
109642801 CDS
T06037
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04140
Autophagy - animal
pov04148
Efferocytosis
pov05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109642801 (vps16)
04148 Efferocytosis
109642801 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109642801 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109642801 (vps16)
Membrane trafficking [BR:
pov04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109642801 (vps16)
Hops complex
109642801 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
109642801
NCBI-ProteinID:
XP_019963292
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAFITANWNPLGEAFYRKSELYDMSWNIRDGLRDSLVAAAPYGGPIALLREPHRRSPNSR
PQLEIYSASGVAVASFPWKSGPVVQLGWTVTDELLCVQEDGSVLIYDLFGSFKRHFSMGQ
EVVQTQVLEAKVFHSPYGTGVAIVTGSSRFTLATNIDDLKLRRLPEVPGLQGKPSCWVVL
TQDRQTKVLLSIGPELFILDNTSCTAVCPPGVGPQGGSIVHMSVSFSYKYLALFTDTGHL
WTGPSHLQDKLSEIDTKKTTTPKQMVWCRRPKSQQPSVVLMWDRLLLVAGVCGDTIQFPV
EDLCVLVGELDGVRIISSSNQELLQEVPLVCQEIFKIASMAPGALLLEAHREYQKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDSNTQRSLLRAASFGKCFLTDFSPDHFVSTCR
ELRVLNSVRENAVGLPLTHTQFKQMTLQVLIDRLVYRQFYPLAIEICRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARVVCVKVGDSPGVSYSHIAAKAYECGRTELAIKLLDFEA
RSGEQVPLLLKMKRSQLALSKAVESGDTDLVYTVVSYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTSSYREKRLESRLSLLQSAVDEYNKAKND
FSTKATEDEMRLLRFQRKLDDEKGAGLLGLSLQATMEALLSLGLHKQTEQLYRDFRVPDK
RYWWLKLKALAEKEEWEELEKFSKSKKSPIGYLAFVDVCMKCNNKYEAKKYVSKVTPEQK
VKAHLVVSDLEGAADAAIERRNDAEIGAVLSRCSASDRLLIDRLNRAAAAKK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcatcacagccaactggaacccgctgggagaagctttttatcgtaaatcagag
ctttacgacatgagctggaacatacgtgacggactcagagacagtttggtggctgcagca
ccgtatggaggaccgatagccctcctcagagaacctcacagacgttctccgaattctcgt
cctcaactggaaatttattctgcatctggagtcgctgttgccagttttccttggaaaagt
ggacctgtggtccagttgggttggacagtcactgacgagttgttgtgtgttcaagaagac
ggatcagttctgatctatgatctgttcggatccttcaagagacacttcagtatgggtcag
gaagtggtccagactcaggtattggaggccaaagtgtttcactctccttatggaacaggt
gttgccatagtaaccggctcttctcgcttcaccttggcaaccaacattgacgacctgaag
cttcgccgattacctgaagttccaggtcttcaggggaagccatcttgttgggttgtcctg
actcaggacagacagaccaaagttcttctgtccataggacctgaactcttcattctggac
aacacgtcttgtactgctgtgtgtcctccaggtgtcggtccacaggggggtagcatcgtc
cacatgtctgtgtctttcagctataaatatctggctctctttactgacacgggacacttg
tggacaggtccctcccacctccaggacaaactgagtgaaattgacaccaagaaaacaacg
acccctaaacagatggtgtggtgtcgcagaccaaagagtcagcagccctctgtggtgctg
atgtgggacagactcctcctggtggctggagtctgcggtgacaccatacaattccctgtg
gaggatttgtgtgttctggttggagaacttgatggagttcggatcatcagctcctccaat
caggagcttcttcaggaggttcctctggtctgtcaggaaatcttcaagatcgcctccatg
gctcctggagctctgctgctggaggcgcaccgcgagtaccagaagtccagtcagaaggcg
gatgagtacctgagggagatcaaagagcaaagcatgctgggagaagcagtcagacagtgt
gtggaggctgcaggtcacgagtatgactccaacacccagaggtctttgctgcgggcggca
tccttcgggaagtgtttcctgacagacttcagtccagatcatttcgtgtcgacctgcaga
gaactgcgagtcctgaactctgtcagagagaacgccgtgggtctgccgctcacgcacacc
cagtttaaacagatgactctgcaggtgctgatagacaggctggtgtatcgacagttttat
ccgttagcgatagagatctgtcgttacctgaagattcctgattatcagggtgtcagtcgg
gtcctgaaacactgggcgtcttgtaaggtgcagcagaaggacctatcagatgaggcaatt
gcccgagtggtgtgtgtgaaggtgggagactcacctggtgtttcttactctcacattgca
gcgaaagcctatgagtgtggacgcactgagctcgccatcaagctgttggactttgaggct
cgttctggagaacaggtccctctgctgttgaagatgaagaggagtcagttggctctgagc
aaagctgtggagagtggggacacggacctggtttacacggtcgtcagttacctgaagaat
gagatgaacagaggagatttcttcatgactctgaggaaccaacctgtcgctctcagcctc
tacagacagttctgtaaacttcaggaacaggaaactctgaaggatctttataatcaggac
gacgatcatcaggaactcgccaactactacgtgacgtccagttatagagagaagaggtta
gagagccgtctgtctctcctgcagagcgctgtggacgaatacaacaaagcaaaaaatgat
ttttcaacaaaggccactgaggacgaaatgcgtctccttcgttttcaacgaaaactggat
gacgagaagggggcgggacttctagggctttctctccaggcgaccatggaggctctgctg
tcgttaggtcttcacaaacaaacagaacaactctaccgagacttcagagtcccagacaag
aggtattggtggttgaaactgaaggctctagcggagaaggaagagtgggaggagttagag
aagttctcaaagagcaagaagtctcctataggctacctggcttttgtggacgtttgcatg
aagtgtaacaacaagtacgaagctaagaagtatgtttccaaggtaactcctgagcagaag
gtcaaagctcacctggttgtcagtgacctggagggggcagcagacgctgccatcgagcgc
aggaacgacgcagagattggggctgtcctatccagatgctccgcctctgaccggctactg
attgacaggctgaaccgagctgccgctgccaagaagtga
DBGET
integrated database retrieval system
