Paralichthys olivaceus (Japanese flounder): 109643078
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Entry
109643078 CDS
T06037
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04512
ECM-receptor interaction
pov04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109643078 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109643078 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109643078 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Laminin_I
Motif
Other DBs
NCBI-GeneID:
109643078
NCBI-ProteinID:
XP_019963644
LinkDB
All DBs
Position
Unknown
AA seq
1557 aa
AA seq
DB search
MSLSRGGWTDALGPGLFFVLARFDSHQQRPGPRDLHETTPTYTHIPACTGAPAACSPASA
SHRPGLFPAILNLASNAVISSNATCGDPEPEVYCKLVEHVPGRIIKNPHCPRCDANSVLS
KERHPITNIIDGTNQWWQSPSIKNGRQFHWITITLDLKQIFQVAYIIIKAANSPRPGNWI
LERSLDGVTFDPWQFYAISDTECLTRYNITPRLGPPTYKSDTEVICTSYYSRLNPLEHGE
IHTSLINGRPSADDLTSVLLNFTSARYIRLRLQRIRTLNADLMTLSERDPREIDPIVTRR
YYYSIKDVSVGGMCICYGHAKSCPLDPVTKKLQCVCEHNTCGENCNECCRGYHQEPWQPG
TVSEGNTCESKKQSEPGNGQTLRLSPPLVLLLSPLAEDSVSMAMVPQKFVDDQTSDAVSR
DDLLSVLYHVTSLTVRVHLNNSANGPIRLRSVSLDVADSGSVSGIQAVAVETCECPWGYS
GTSCETCLTGFYRVGGVLFGGNCMQCECNDHATECDINGVCLGCTHNTTGPHCDQCLSGF
YGDPTEGTTNDCRLCPCPLTEPSNSFSPTCMLESSGQVSCDQCQDGYTGSNCERCASGYY
GNPQMVGGACVRCDCNSNVDVNEMGHCDIITGECLRCLGNTTGRHCEVCQPGYYGDAVHA
KDCRECGCVSGALSSVCDVTTGQCSCREKVTGRTCDQCQPGFFGLQSGRGCRACNCSQSG
SLSKSCDEDGRCRCVEGVGGDKCDRCSRGYYGFQGNGCTACTCDHTGGNCNPDNGECICP
AHTEGDTCDRCETGHWGHNLTTGCKPCSCSTAGSSAPQCDVMNGQCRCREGFSGRSCEQC
APGHHGYPVCSACGCDMAGTEDRVCNTTLGVCDCRQTGECLCKVGVSGRRCEECVSGWFG
LSTLNPDGCSECFCSGLSRVCEEKGGLIRTPITLDHSPALLSLVGQSNLQGVVSGVYQQG
GDMLLDTRHLNVSRFTGPLYWRLPPQFEGTKLMAYGGLLSYIITFYAEDGMGLSNQEPQI
LMRGGTLKKLVIYTDMVAPSNGVTTQHDIRMTEHKWKYFNSVSEKAVSHTDFMSVLSNVQ
YVIIKASYGTRLQQSRISNITMATAREVESEEGSEVTGGVARLIESCICPPGYTGLSCQE
CAAGYFRQPQSELSSQSQKLMFVRPCVRCRCSNHSESCDTETGECQDCKHHTSGRSCERC
APGYYGNVSGSISDCSLCACPLRDNSFSQTCESDGAFGDFHCTVCQAGYEGRYCERCSVG
YYGNPSIQGGRCFQCTCSRWGSVHSLCNALTGQCECNPGVKGQSCDQCDDRHILQGGECV
SCDDECTGVLLTDLDELHDHFLSVNVSGVTFAPYRQLVVLENQTRDMQVILSEKSSVSVH
VSRVEDELSHVTSDLRVLLQQVTHLSNNMEEVDLSINNSLSQSALLLQSISSLQDNIQVL
LREAELLNQTTEEELESANQTHVLEDLEFMLENMRAVNLTAANAAALQELSLSESLAHSL
QVDFLSSRGQIENRLRLLFNSLTDAMETLQNTHMHLNNTTQRNTQTHNLLNNTHTLL
NT seq
4670 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgagccggggaggatggacggatgcgctcggtcctggacttttttttgtcctc
gcgaggtttgattcacatcaacaaaggcctggaccacgtgacctgcacgagaccactccc
acatacacacatatccctgcatgcaccggggctcctgcagcctgcagcccggcctctgct
tcacaccgtcccggtctgtttccagccattttgaacctggcgagtaacgcagtgatcagc
agcaacgccacgtgtggagatccagaacctgaagtttactgtaaactggtcgaacacgtt
cccgggagaatcatcaagaacccacactgtcccagatgtgacgccaactcagtcctgtcc
aaagaacgtcatcccatcactaacatcatcgatggaacaaatcagtggtggcagagtccg
agcatcaaaaatggacgacagtttcactggatcaccatcacactggatctgaaacagatt
tttcaggtcgcttacatcatcattaaggcagctaactctcctcgtccaggtaactggatc
ctcgagcgctctctcgatggtgtgacctttgacccctggcagttttatgctatcagtgat
actgagtgtttgactcgttacaacatcacaccgagactcggaccaccgacgtacaagagc
gacaccgaggtcatctgtacgtcgtattactccagactgaacccactggagcacggagag
attcacacctccctgattaacggacgacccagcgcagacgatttgacgtcagttctcctg
aacttcacgtcggctcgttacatccgactgagacttcagcgaatcagaactctgaacgca
gacctgatgacgctgagcgaacgagacccccgagagatcgaccccattgtcacccggagg
tattattactccatcaaagacgtctctgtgggcgggatgtgtatctgctacggacacgct
aagagctgcccgctggaccctgttaccaagaagctgcagtgtgtgtgtgaacacaacacc
tgtggagagaactgcaatgagtgttgccgtggttaccaccaggagccatggcaaccagga
actgtctccgagggaaacacatgtgaaagtaagaaacagagtgaacctggtaacggccag
actcttcgtctctcaccccccctcgtcctcctactctctccactggccgaggactccgtt
tccatggcaatggtccctcagaagttcgtggacgatcagacgagtgatgcagtttcccgt
gacgacctgctgtcagtcctctaccacgtgacgtcactgacggtcagagttcacctgaac
aactctgccaacgggccgatccgtctccggtcagtgtctctggacgtcgcagactctgga
tcagtctctggcattcaggccgttgccgtggagacatgtgaatgtccgtggggctacagc
ggcacttcctgtgagacatgtctcacaggtttctacagagtgggcggagtcttgtttgga
gggaactgtatgcagtgcgagtgtaacgaccacgcgaccgagtgcgacatcaacggagtt
tgtttgggttgtactcacaacaccacaggtcctcactgtgatcagtgtctctctggtttc
tatggcgaccccacagaggggacaaccaatgactgtcggctgtgtccgtgtcctctgact
gagccgtccaacagtttcagtcccacctgcatgttggagtcgtcaggtcaggtgtcatgt
gaccagtgtcaggacggatacacggggtcaaactgtgagaggtgtgccagtggttactat
ggtaacccacagatggtgggcggggcctgtgttcgatgtgactgtaacagtaacgtggac
gtcaacgagatgggacactgtgacatcatcactggggagtgtctgcgttgccttggtaac
acgactggtagacactgtgaggtctgtcagcctggttactatggagatgccgtgcacgcc
aaagactgtcgggagtgtggctgtgtcagtggcgccctctccagtgtgtgtgatgtcaca
acaggtcaatgttcatgcagagaaaaagtaactggacgaacctgtgaccaatgccagccg
gggttcttcgggctgcagagtgggcggggctgcagggcttgtaactgcagccaatctgga
tcgctctccaagtcatgtgacgaggacggacggtgtcggtgtgtggagggcgttggtgga
gacaaatgtgaccgctgtagtcgtggttactatggtttccaaggcaacggatgcactgca
tgcacctgtgatcacactggtgggaactgtaaccctgacaacggagagtgcatctgcccc
gctcacacagagggagacacctgtgacaggtgtgagacaggtcactggggtcacaacctc
accacaggctgcaagccatgcagctgcagcacagcaggaagctccgcccctcagtgtgat
gtcatgaacggtcagtgtcggtgcagagaagggttctctggcaggtcatgtgaacagtgt
gcacctggtcaccatggttacccggtatgctcggcgtgtggctgtgacatggcgggaaca
gaagacagggtctgcaacacgacgctcggagtgtgcgactgtcgacaaactggagagtgt
ctgtgcaaggtgggcgtgtcggggcggcgctgtgaggagtgtgtctctggttggttcggt
ttgtccaccttgaatccagacggctgctctgagtgtttctgttcaggtctgagtcgagtc
tgtgaagagaagggaggactcatcagaacccccatcacccttgatcactcccccgctctc
ttgtcattggtcggtcagtctaacctgcagggtgtggtatctggagtttaccagcagggc
ggcgacatgctacttgacacccgtcatcttaatgtcagcagattcaccggccccctctac
tggagactgcccccccaatttgaaggcaccaagctgatggcgtacggaggactgttgtct
tacatcatcacgttctatgctgaagacggtatgggactgtccaatcaggagcctcagatt
ctgatgaggggcgggactctgaagaagcttgttatatacactgacatggttgcccctagc
aatggcgtcacgactcagcatgacatcaggatgactgagcacaaatggaagtactttaac
tctgtgtcggagaaggcggtgagtcacactgacttcatgtccgtccttagtaacgtccaa
tacgtcatcatcaaagcttcatatgggaccagacttcagcagagcaggatttctaacatt
accatggcgacagcacgggaggtggagtcagaggaaggttcagaggtcacagggggtgtg
gccagactcattgagtcctgcatttgtccacctggatacacaggactgtcctgtcaggag
tgtgcagcaggttatttccgtcagcctcagtctgagttgtcgtctcagagtcagaagttg
atgtttgttcgtccgtgtgttcgatgtcgctgcagtaaccacagtgagagctgtgacacg
gagactggagagtgtcaggactgcaagcatcacaccagtgggcgtagctgtgagcggtgt
gccccagggtattatgggaatgtcagtggctctatcagtgactgttcactttgtgcctgc
cccctacgggacaacagtttcagtcaaacgtgtgagtcagacggagcgtttggtgatttt
cactgcaccgtctgtcaggcgggatacgaggggagatactgtgagaggtgttctgttggt
tactacggtaacccctcaatacaaggtgggaggtgttttcagtgcacatgcagtaggtgg
ggctccgtccactcattgtgcaacgcactgacaggacagtgtgagtgtaatcctggggtc
aaaggtcaatcatgtgaccagtgtgacgacagacacatccttcagggaggagagtgtgtg
tcatgtgacgatgagtgcaccggcgttctgctgactgacctggacgaactgcacgaccac
ttcctctctgtcaatgtgagcggtgttacctttgcaccataccgccagttggtggtgcta
gagaaccagaccagagacatgcaggtgattttatcagagaaaagttccgtcagcgttcac
gtgtccagagtcgaagacgagttgagtcatgtgacctcagacctcagagtgttactacag
caggtcacacatctgtctaacaacatggaggaggtggacctgtccatcaacaatagcctc
tcccagagtgcactgctgctgcagagtatcagcagccttcaagacaatattcaggtgctg
ctgagggaggcggagcttctgaaccagaccacagaggaggagcttgaatcagccaatcag
acacatgtgctggaggacttagagttcatgctggaaaacatgagagctgtcaatctaacg
gccgctaacgcagcagctcttcaggagctcagcctatcagagtctctcgctcactcgctg
caggtggacttcctgtccagcagggggcagattgaaaacaggctccgcctcctcttcaac
tccctcactgacgccatggaaacactgcaaaacacacacatgcacttaaacaatactaca
caacgaaacacacaaacacacaatctgctgaacaacacacacactctgct
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