Paralichthys olivaceus (Japanese flounder): 109643094
Help
Entry
109643094 CDS
T06037
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109643094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109643094
03036 Chromosome and associated proteins [BR:
pov03036
]
109643094
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109643094
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109643094
PBAF complex
109643094
GBAF(ncBAF) complex
109643094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
109643094
NCBI-ProteinID:
XP_019963662
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
YVQNDSPSSKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPAKCFQDFKAGGALCHILGSV
YKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKNLVQNNCLTRPTVFLSPDIEQKQASKLK
DIIKRHQGSITDDKSKATHHIYPSPSQQDEEEWLRPVMRKDKQVLVHWGLYPDSYDTWVS
ASEVDGDVEDPPSTDRPWKVHAKWVLETDAFNEWMNEEDYEVDENKKPVSFRQRIFPKEE
ESSRTPDRKERKANSAGKKRRRSPSPPSTPAESRKKGGKKGNPGPHWKRRGHRGEEEDTE
EDMTKDLDDSSAGASLEEGSVSKNASSKKDSENTPVKGGNVADLDDMEDDSVLSGGKDDE
DQGKAEINRLIDAGEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSKTP
EIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAIMRVHAFLEQWGLVNYQVDSDSR
PLPMGPPPTPHFTVLADTPSGLIPLNHRPPPIPPQQPMPNFIDKGKDKAIDLQNFGLRPD
LYKKSTKGKAVTSTRDWTEQETLLLLEALEMFKDDWNKVSEHIGSRTQDECILHFLRLPI
EDPYLESTESTLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVASAAARAALEEFSRVR
EEVPAELVEAHVKKVQEAARSTGKVDPAFGLESSGIAGTAPEEPEKTETTETEKMDTDSD
SQQADKAESKDEAEKPSESAEKSDKTEPTDKVKKEGTEPSEREEETEEGGDSKTSPAEKD
KEETMETSSSEQEKEKDEKAVTEEGEEKRKKLEHDIGEGNIATAAAAALASAATKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHME
QLKYAEMKARQQMEQQAAAAAAAAAAAAAQAQGQAPGSGPHSGPSQPGMHPGGPPPHHGG
PPPHHGGPPPGAAMHPGYPPMGHHPMAPHHPGQTGPMGPGQPIPGRMMPGPPTAGPPPGG
MAPMMPPRHPGAPNGMYPGPAPAQPEAVPAAPVAPPAPPSARVADN
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
tatgtccagaatgattccccctccagtaaatccttggcgggcctggttgtccagctgctg
cagttccaggaggatgcgtttggacgcagagtcaacaatcctgctcttaccaagctacct
gcaaaatgttttcaggatttcaaggcaggaggtgctctctgtcacatcctggggtctgtc
tacaagttcaagagtgagcagggctggcgtcgatttgatctgcagaatccttcccggatg
gacaggaacgtggaaatgttcttaaatgttgagaagaacttggttcagaataactgcctg
actcgacccactgtcttcctgtcgccggacatcgagcagaaacaggccagtaagctcaaa
gacatcatcaaaaggcaccagggctcgattactgacgataaatcaaaggccacccaccac
atttacccctcaccatcccaacaagacgaagaggagtggcttcggcctgtgatgaggaaa
gacaagcaggtgctggtgcactggggtctctacccagacagctatgatacctgggtatca
gccagcgaggtggatggtgacgtggaggatcctccgagcactgacagaccctggaaggtt
cacgccaagtgggttttagagacagacgccttcaacgagtggatgaacgaagaagactac
gaggtagacgagaacaagaaaccagtcagcttccgccagaggatcttccccaaagaggag
gagtcttcccgtacacccgatcgcaaggagcgcaaagccaactctgccggcaagaagagg
aggcgctcgccctcaccgcccagtactcctgctgagtctcgcaagaagggaggaaagaag
gggaatcccgggcctcactggaagcgacgaggccacagaggcgaggaggaggacacagag
gaggacatgaccaaggacttagacgactcgtcggctggtgccagcttggaggagggcagc
gtgtccaaaaatgcaagttcaaagaaagacagcgaaaatactccggtgaaaggagggaat
gtggccgacttggatgacatggaggacgactctgtgctgtctggtggaaaggatgacgag
gaccagggcaaagctgaaatcaaccggctgatcgatgctggcgaggacaacgtgactgaa
cagactcatcacatcatcatccccagctatgctgcctggttcgactacaactgcatccac
gagattgagagaagagccttacccgagttcttcaatggaaagaacaagtccaaaactcca
gagatatacctggcctaccgtaacttcatgatcgacacgtaccggctcaaccctcaggag
tatctcacctccacctcctgccgcaggaacttgaccggagatgtgtgcgccatcatgagg
gtccatgcgttcttggagcagtggggtttggtcaattaccaggtggactcagatagtcgc
cctttgcccatgggccccccacccacaccccacttcactgtgctggctgacacaccctct
ggcctcatacccttgaaccacagacccccaccgattcctcctcaacagccgatgcccaac
ttcatagacaaaggcaaagacaaagccatcgacctgcagaactttggccttcgccccgac
ctctacaagaaaagcaccaagggtaaagcagtcacttccaccagggactggaccgagcag
gagactctgctgttgctagaggctctggagatgttcaaagacgactggaacaaagtgtcg
gagcacataggttcccgcacccaggatgagtgtatcctgcacttcctacggctgcccatc
gaggatccttacctggagagcacggagtccactctgggccctctagcctaccagcccata
cccttcagccagtctggaaaccctgtcatgagcactgtcgccttcctggcctctgtggtc
gaccccagagtcgcatctgctgcagccagggcagctctagaggagttttcccgtgtgcgt
gaggaggtgcctgctgagctggtggaggctcatgtgaagaaggtgcaggaagctgccagg
agcacaggaaaggtggaccccgccttcggcctggaaagcagtggcatcgctggcacggcc
cccgaggagccagaaaagactgaaaccacagagacagaaaaaatggacacggactcagac
tcccaacaggctgataaggcagagtcgaaggatgaggcagagaagcccagtgagtctgca
gaaaagagcgacaagacggagcctacagacaaagtgaagaaggagggaacagagccatca
gagcgcgaggaggagacggaggaaggaggagacagcaagacgtctccagcagaaaaagac
aaggaggagaccatggagacatcgtcctcagagcaggaaaaggagaaggacgagaaggca
gtgacagaggagggagaggaaaagaggaagaagctggagcatgacattggagagggaaac
atcgccaccgcggccgcagctgctctggcatctgctgccaccaaggccaagcacttggca
gcagtggaggagaggaagatcaagtccctggttgctctgctggttgagacacagatgaag
aagctggagattaagctgaggcacttcgaggagcttgagaccatcatggaccgagagaaa
gaagcattggagctccagcgacagcagctgctcaccgagcgtcaggcgttccacatggag
cagctcaaatatgccgagatgaaggcgaggcagcagatggagcaacaagctgctgctgct
gccgccgccgctgctgccgcagctgcccaggcccagggacaggcccccggatctggaccc
cactctgggccctctcaaccaggcatgcaccccggaggacccccaccacatcacggagga
cccccaccacaccacggagggccaccgcccggtgctgccatgcaccctggctacccccca
atgggtcaccaccccatggcccctcaccacccaggacagacaggaccgatgggaccaggc
cagccgatacctggacgtatgatgcctggcccgcccaccgcaggcccccctcctggcggc
atggctcccatgatgcccccacgccaccctggagctcccaacggcatgtaccctggccca
gcacctgcacagcctgaagcggttcctgcagctcctgtggctcctccagcgcccccgagt
gcccgggtggctgacaactaa
DBGET
integrated database retrieval system
